GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001902-TA|BGIBMGA001902-PA|IPR005331|Chondroitin
4-O-sulfotransferase
         (256 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   1.6  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   1.6  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   6.5  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    23   6.5  

>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 8/75 (10%)

Query: 10  RREFLRSGCSRFGLDSRGQKANAWEYLINRQ-----YHVIWCNIFKAAST-SWMYNFNLM 63
           +R+F  +GCS   L S  +K   +E+ +  +       +I   IF      S  YN  + 
Sbjct: 296 KRDFHPTGCSLNNLLSTNRKV--YEFGLEHEGLKPPSQIILSTIFLVTDVLSEFYNRRIA 353

Query: 64  ANYSAAFLDKTKEVP 78
           AN +  F D+   VP
Sbjct: 354 ANANGLFYDRAGSVP 368


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 8/75 (10%)

Query: 10  RREFLRSGCSRFGLDSRGQKANAWEYLINRQ-----YHVIWCNIFKAAST-SWMYNFNLM 63
           +R+F  +GCS   L S  +K   +E+ +  +       +I   IF      S  YN  + 
Sbjct: 296 KRDFHPTGCSLNNLLSTNRKV--YEFGLEHEGLKPPSQIILSTIFLVTDVLSEFYNRRIA 353

Query: 64  ANYSAAFLDKTKEVP 78
           AN +  F D+   VP
Sbjct: 354 ANANGLFYDRAGSVP 368


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/40 (22%), Positives = 21/40 (52%)

Query: 214 RLQDVVKPEWRNSGKGTNTLHNINHLYSRLKRSQLDGLYK 253
           ++   +KPE  +  +   T+ N+     R+ +++ +G YK
Sbjct: 389 KIDTELKPEMMSIERSIETIENVASNKLRILQTRFEGTYK 428


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/36 (33%), Positives = 21/36 (58%)

Query: 209 LIQLARLQDVVKPEWRNSGKGTNTLHNINHLYSRLK 244
           L+Q+A L+  +    R+SG   +T H+   L++ LK
Sbjct: 196 LVQIAALKQRLGRLGRHSGTMASTGHSAGTLFAELK 231


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.324    0.136    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,176
Number of Sequences: 2123
Number of extensions: 10913
Number of successful extensions: 68
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 66
Number of HSP's gapped (non-prelim): 4
length of query: 256
length of database: 516,269
effective HSP length: 63
effective length of query: 193
effective length of database: 382,520
effective search space: 73826360
effective search space used: 73826360
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 47 (23.0 bits)