Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001902-TA|BGIBMGA001902-PA|IPR005331|Chondroitin
4-O-sulfotransferase
(256 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81530-7|CAB04310.1| 329|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical pr... 33 0.26
AY241928-1|AAO85277.1| 806|Caenorhabditis elegans xylosyltransf... 32 0.35
AJ496235-1|CAD42732.1| 806|Caenorhabditis elegans peptide O-xyl... 32 0.35
AC025722-4|AAK68509.3| 806|Caenorhabditis elegans Squashed vulv... 32 0.35
AF039711-1|AAB96712.1| 328|Caenorhabditis elegans Hypothetical ... 29 3.3
Z77660-1|CAB01175.1| 162|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z48045-7|CAA88098.1| 329|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of... 28 5.7
Z75550-1|CAA99921.1| 183|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF016447-10|AAG24008.1| 314|Caenorhabditis elegans Hypothetical... 28 7.5
U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z81530-7|CAB04310.1| 329|Caenorhabditis elegans Hypothetical
protein F36D1.8 protein.
Length = 329
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 81 LARRKYARPTIEMIKKAQPDSITFLIVRHPLERLASAYNDKIVH 124
L ++ PT E++ PD + F +R P+ R S Y DK ++
Sbjct: 126 LEEDQFLNPTFELLN--DPDLVRFAFIRDPIHRFISLYLDKCIY 167
>Z49968-5|CAE47470.1| 1155|Caenorhabditis elegans Hypothetical
protein M110.4b protein.
Length = 1155
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 138 IIKKYRKSQNKPVPTERYPVFEEFVSYVLDETRAR 172
+ KK R NK PT + P+ EEF+SY + A+
Sbjct: 516 VCKKVRSLMNKVTPTSQRPLTEEFISYNVSSNDAQ 550
>Z49968-4|CAA90261.1| 1156|Caenorhabditis elegans Hypothetical
protein M110.4a protein.
Length = 1156
Score = 32.7 bits (71), Expect = 0.26
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 138 IIKKYRKSQNKPVPTERYPVFEEFVSYVLDETRAR 172
+ KK R NK PT + P+ EEF+SY + A+
Sbjct: 517 VCKKVRSLMNKVTPTSQRPLTEEFISYNVSSNDAQ 551
>AY241928-1|AAO85277.1| 806|Caenorhabditis elegans
xylosyltransferase protein.
Length = 806
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 41 YHVIWCNIFKAASTSWMYNFNLMANYSAAFLD---KTKEVPLVLARRKYARPTIEMIKKA 97
YH + NIFK +F +AN++ + K ++V + A R + IE++ K
Sbjct: 536 YHFAFANIFKTGIDEQKLHFESLANFALKSTETRAKFRKVLRIDALRAHHNALIEIVMKI 595
Query: 98 Q-PDSITFLIVRHPLERLASAYNDK 121
+ D TF + H L + N++
Sbjct: 596 ETTDGATFEFLIHRLSHVNLTENEE 620
>AJ496235-1|CAD42732.1| 806|Caenorhabditis elegans peptide
O-xylosyltransferase protein.
Length = 806
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 41 YHVIWCNIFKAASTSWMYNFNLMANYSAAFLD---KTKEVPLVLARRKYARPTIEMIKKA 97
YH + NIFK +F +AN++ + K ++V + A R + IE++ K
Sbjct: 536 YHFAFANIFKTGIDEQKLHFESLANFALKSTETRAKFRKVLRIDALRAHHNALIEIVMKI 595
Query: 98 Q-PDSITFLIVRHPLERLASAYNDK 121
+ D TF + H L + N++
Sbjct: 596 ETTDGATFEFLIHRLSHVNLTENEE 620
>AC025722-4|AAK68509.3| 806|Caenorhabditis elegans Squashed vulva
protein 6 protein.
Length = 806
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 41 YHVIWCNIFKAASTSWMYNFNLMANYSAAFLD---KTKEVPLVLARRKYARPTIEMIKKA 97
YH + NIFK +F +AN++ + K ++V + A R + IE++ K
Sbjct: 536 YHFAFANIFKTGIDEQKLHFESLANFALKSTETRAKFRKVLRIDALRAHHNALIEIVMKI 595
Query: 98 Q-PDSITFLIVRHPLERLASAYNDK 121
+ D TF + H L + N++
Sbjct: 596 ETTDGATFEFLIHRLSHVNLTENEE 620
>AF039711-1|AAB96712.1| 328|Caenorhabditis elegans Hypothetical
protein F49D11.6 protein.
Length = 328
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 100 DSITFLIVRHPLERLASAYNDKIVH 124
+++ F +R P++R S Y DK VH
Sbjct: 144 ETVRFAFIRDPIQRFVSLYLDKCVH 168
>Z77660-1|CAB01175.1| 162|Caenorhabditis elegans Hypothetical
protein F38H4.1 protein.
Length = 162
Score = 28.3 bits (60), Expect = 5.7
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Query: 134 MGRMIIKKYRKSQNKPVPTERYPVFEEFVSYVLDETRARRSLDMH----W--TPYTDFCT 187
MG++ I + + + + P T+R+ ++ V +T ARRS+ W ++ F
Sbjct: 28 MGQLSIDR-QWTGSTPAETDRFATTKDHRKTVWSKTGARRSIGKEKGGSWRVKKFSHFLV 86
Query: 188 PCRFAFDVILKFETLDEDQRYLIQLARLQDVVKPEWRNSGKGTNTLHNINHLY 240
RF + + E+ ++ + L+R + V P W S N + NHLY
Sbjct: 87 SLRFNYGPLTDRES---NRELFLNLSRSRSVNGPFWALSALPFN--RSQNHLY 134
>Z48045-7|CAA88098.1| 329|Caenorhabditis elegans Hypothetical
protein C41C4.1 protein.
Length = 329
Score = 28.3 bits (60), Expect = 5.7
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 21/197 (10%)
Query: 34 EYLINRQYHVIWCNIFKAASTSWMYNFNLMANYSAAFLDKTKEVPLVLARR----KYARP 89
EY I +Y++ C I K+ ST M + + F+ + + V + R K
Sbjct: 76 EYAIAPKYNISICRIKKSMST-LMSGVACVLYDTGKFMRNNRSILEVWSHRFCGEKNEYR 134
Query: 90 TIEMIKKAQPDS-ITF---LIVRHPLERLASAYNDKIVHAWPKSFHDKMGRMIIKKYRKS 145
+ +K D+ TF +++R P+ R S +++K + K + D+ + Y
Sbjct: 135 RMNEVKWRMGDAHHTFKKIVVIRDPIARFISFFSNKCIFEAQK-YPDRK-----QCYNCQ 188
Query: 146 QNKPVPTERYPVFEEFVSYVLDETRARRSL-DMHWTPYTDFCTPCRFAFDV-ILKFETLD 203
N E+ +E FV + D +R R S D H P + C +F D I+K
Sbjct: 189 GNVTCFLEKQ--YERFVQHSSDYSRIRPSYEDKHAAPLSWNCEFGKFLKDYKIIKLAVDP 246
Query: 204 EDQRYLIQLARLQDVVK 220
+D++ LA L +V+K
Sbjct: 247 KDRKN--GLANLMNVLK 261
>AF067949-1|AAC19236.2| 1446|Caenorhabditis elegans Suppressor of
constitutive dauerformation protein 2 protein.
Length = 1446
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 45 WCNIFKAASTSWMYNFNLMANYSAAFLDKTKEVPLVLARRKYARPTIEMIKKAQPDSITF 104
+CN + + Y+ L + A L+K EVPL L R + I+ + + + F
Sbjct: 378 YCNSWYQVTNVTDYHERLSEPTTVAPLNKLNEVPLHLFRLQSPSAKIKEAMRGSGNMLVF 437
Query: 105 LIVRHPLERLASA-YNDKIVHAWPKSFHDK 133
+PL R SA + ++ P+++ +K
Sbjct: 438 DHKPNPLTRRTSALVSPELPRTNPEAYDEK 467
>Z75550-1|CAA99921.1| 183|Caenorhabditis elegans Hypothetical
protein T22C1.2 protein.
Length = 183
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 130 FHDKMGRMIIKKYRKSQNKPVPTERYPVFEEFVSYVLDETRARRSLDMH 178
+ DK+G I + R+ Q + E VSYV+D+ R S +H
Sbjct: 122 YWDKLGEAITETIREYQGWKIHRESLRAATVLVSYVVDQLRFGYSRGLH 170
>AF016447-10|AAG24008.1| 314|Caenorhabditis elegans Hypothetical
protein C54F6.3 protein.
Length = 314
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 85 KYARPTIEMIKKAQPDSITFLIVRHPLERLASAYNDK 121
K+ P++ ++ D++ F +R P+ER S Y DK
Sbjct: 115 KFRIPSLLLLNDT--DTVRFAFIRDPIERFVSLYLDK 149
>U23176-7|AAC46713.4| 454|Caenorhabditis elegans Hypothetical
protein F21H12.1 protein.
Length = 454
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 195 VILKFETLDEDQRYLIQLARLQDVVKPEWRNSGKG 229
V L E D DQR + L +++ P W S KG
Sbjct: 412 VPLDIENADNDQRLPDDIRNLDNLLNPAWVASAKG 446
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.324 0.136 0.425
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,380,116
Number of Sequences: 27539
Number of extensions: 263945
Number of successful extensions: 814
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 807
Number of HSP's gapped (non-prelim): 13
length of query: 256
length of database: 12,573,161
effective HSP length: 80
effective length of query: 176
effective length of database: 10,370,041
effective search space: 1825127216
effective search space used: 1825127216
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 58 (27.5 bits)
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