BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001902-TA|BGIBMGA001902-PA|IPR005331|Chondroitin 4-O-sulfotransferase (256 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g08490.1 68418.m01005 pentatricopeptide (PPR) repeat-containi... 28 5.3 At3g16740.1 68416.m02137 F-box family protein contains F-box dom... 28 7.1 At1g61360.1 68414.m06915 S-locus lectin protein kinase family pr... 28 7.1 At1g04180.1 68414.m00408 flavin-containing monooxygenase family ... 28 7.1 >At5g08490.1 68418.m01005 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 849 Score = 28.3 bits (60), Expect = 5.3 Identities = 12/29 (41%), Positives = 18/29 (62%) Query: 98 QPDSITFLIVRHPLERLASAYNDKIVHAW 126 +P S+TF IV RL +YN K +H++ Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSY 147 >At3g16740.1 68416.m02137 F-box family protein contains F-box domain Pfam:PF00646 Length = 391 Score = 27.9 bits (59), Expect = 7.1 Identities = 12/45 (26%), Positives = 24/45 (53%) Query: 43 VIWCNIFKAASTSWMYNFNLMANYSAAFLDKTKEVPLVLARRKYA 87 V W +F A + F N ++ F+D+ K+V +VL + +++ Sbjct: 303 VSWRKVFLAVDMKSLTGFQFDINAASFFVDEKKKVAMVLDKDRFS 347 >At1g61360.1 68414.m06915 S-locus lectin protein kinase family protein contains protein kinase domain, Pfam:PF00069; contains S-locus glycoprotein family domain, Pfam:PF00954 Length = 821 Score = 27.9 bits (59), Expect = 7.1 Identities = 16/81 (19%), Positives = 33/81 (40%) Query: 28 QKANAWEYLINRQYHVIWCNIFKAASTSWMYNFNLMANYSAAFLDKTKEVPLVLARRKYA 87 +K +EY++N+ + ++ K W FN++ + L ++ L + R Sbjct: 566 EKLLVYEYMVNKSLDIFIFDLKKKLEIDWATRFNIIQGIARGLLYLHRDSFLRVVHRDLK 625 Query: 88 RPTIEMIKKAQPDSITFLIVR 108 I + +K P F + R Sbjct: 626 VSNILLDEKMNPKISDFGLAR 646 >At1g04180.1 68414.m00408 flavin-containing monooxygenase family protein / FMO family protein similar to flavin-containing monooxygenases YUCCA [gi:16555352], YUCCA2 [gi:16555354], and YUCCA3 [gi:16555356] from Arabidopsis thaliana; contains Pfam profile PF00743 Length = 421 Score = 27.9 bits (59), Expect = 7.1 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 119 NDKIVHAWPKSFHDKMGRMIIKKYRKSQNKPVPTE--RYPVFEEFVSYV 165 +D I W K +D++ + KK+ + P P YP +F+ Y+ Sbjct: 54 SDCIASLWQKRTYDRLKLHLPKKFCQLPKMPFPDHYPEYPTKRQFIDYL 102 Database: arabidopsis Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.324 0.136 0.425 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,022,612 Number of Sequences: 28952 Number of extensions: 244383 Number of successful extensions: 689 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 686 Number of HSP's gapped (non-prelim): 4 length of query: 256 length of database: 12,070,560 effective HSP length: 80 effective length of query: 176 effective length of database: 9,754,400 effective search space: 1716774400 effective search space used: 1716774400 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.6 bits) S2: 58 (27.5 bits)
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