Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001900-TA|BGIBMGA001900-PA|undefined
(1266 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0016 - 40476014-40476333,40476598-40476740,40476945-404790... 35 0.48
11_06_0021 + 19314211-19314311,19315202-19315307,19317135-193174... 33 1.5
05_05_0239 - 23543592-23544293,23544482-23544634,23544737-235449... 33 1.5
02_03_0106 + 15292869-15296138 33 1.5
01_01_1084 - 8521796-8522389,8522503-8522983,8523084-8523190 33 1.9
08_01_0378 + 3360215-3360253,3360326-3360437,3362176-3362213,336... 32 2.6
01_01_0274 - 2263304-2264211,2264490-2264673 32 3.4
08_02_0843 - 21759183-21759556,21760255-21762913 31 5.9
03_02_0882 - 12121917-12124446,12124739-12124919,12125057-121251... 31 5.9
11_06_0584 - 25220371-25222917 31 7.8
11_01_0574 + 4582098-4582331,4582450-4582492,4582683-4582757,458... 31 7.8
04_04_0165 + 23247265-23247472,23248115-23248407,23249182-232492... 31 7.8
03_03_0206 + 15447054-15447181,15448243-15448298,15448373-154485... 31 7.8
02_03_0127 + 15547048-15547302,15547511-15548459,15548562-155486... 31 7.8
01_01_1106 + 8750597-8754031 31 7.8
>01_07_0016 - 40476014-40476333,40476598-40476740,40476945-40479099,
40479205-40480047,40480176-40480269,40480356-40481207,
40481367-40481437,40481750-40481821,40481977-40482019
Length = 1530
Score = 34.7 bits (76), Expect = 0.48
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 283 SNKKDGLPITERDIIRITNERMQS--LPNAMRQDDGMIKKNPLLSNTYTDHKGFXXXXXX 340
SN++ LP+ ++ ++ + ++++QS L NA+RQ G ++ L D G
Sbjct: 985 SNQRQMLPLEQQILLGLHHDQLQSQQLANALRQHAGREEERHLSGGWPMDESGHFIRSGT 1044
Query: 341 XXXXXXFGDSSVMSDDNLYHNQTTSALIHQHREFKINRDNPELSHRDDSGIERL 394
G +S + +L + S+ + QH + + E HR GI L
Sbjct: 1045 SPNQ---GHASRLGHFDLLQSLQRSSSVEQHEHLERSLSLHERLHRGGQGIHSL 1095
>11_06_0021 + 19314211-19314311,19315202-19315307,19317135-19317412,
19318587-19318692,19318812-19319159,19319237-19319313,
19319392-19319516,19319884-19320135,19320314-19320336
Length = 471
Score = 33.1 bits (72), Expect = 1.5
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 1161 GLNTNTFVKNDKIDNKPRNRQKKGTNVQDSGYLSSDSTNSTPFQRKLVVAKIVSCSESDD 1220
GL+TN K K K + R K+ + S ++S ST L KIV+ S+ DD
Sbjct: 372 GLSTNPSEKEIKAVKKRKERAKELEGIDMSNIITSSRRRSTSNFIPLPTPKIVADSDEDD 431
Query: 1221 TENEARSESGAE 1232
E +A ++ E
Sbjct: 432 -EEDAEDDNDEE 442
>05_05_0239 - 23543592-23544293,23544482-23544634,23544737-23544922,
23544951-23545097,23545274-23545411,23545527-23545727
Length = 508
Score = 33.1 bits (72), Expect = 1.5
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 7/105 (6%)
Query: 1013 EGRILTLELRHSKRQRQSTPPTIKQLKNLARPDVLPPLPP---AIDYPIYEQPISPPR-- 1067
E + L+ TPPT + LK A D P PP ++ ++P +PP
Sbjct: 386 ESPTMRRSLKEENVDEPETPPTRRSLKEKADVDAPPETPPTRRSLKEADVDEPDTPPTRR 445
Query: 1068 --KVENDRIPIGEYSKNDNGRSLNPRTFEKNLTTDIVDCDTSTTP 1110
K + D P +K D G T + + D + +TTP
Sbjct: 446 SIKEDADDAPETPTTKQDIGSPETATTPARRSSNDDLGAAETTTP 490
>02_03_0106 + 15292869-15296138
Length = 1089
Score = 33.1 bits (72), Expect = 1.5
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 892 IKIHESDGFEPDTLDRKHTKH--KDLMD--NVQFSRRDFIKSIESIENEEGPPRQRIKL 946
I+ +S+ + + D+K T+ K+++D N QFSR + IK+ E I NE PP+ KL
Sbjct: 736 IEEQQSEQEQENQDDQKETEEEEKEVLDVTNSQFSREESIKASEKIWNELTPPQNIEKL 794
>01_01_1084 - 8521796-8522389,8522503-8522983,8523084-8523190
Length = 393
Score = 32.7 bits (71), Expect = 1.9
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 25 GDIFTLIGEECGAAQCAEHGAGQGAEDGIGCAC-VCPQRAPLFREDRELCVDDLPECALA 83
GD + EE A+C Q A++G G C VC +R L +CVDD+ A A
Sbjct: 86 GDGADGVQEEALVARCVVCRRRQVADEGEGGVCSVCLRRRML---SSVVCVDDMSAVADA 142
Query: 84 TFGTGL 89
T G G+
Sbjct: 143 TAGVGM 148
>08_01_0378 + 3360215-3360253,3360326-3360437,3362176-3362213,
3363949-3363966,3364629-3364847,3364937-3366727,
3367764-3367827,3367915-3367975,3368685-3368694
Length = 783
Score = 32.3 bits (70), Expect = 2.6
Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 6/157 (3%)
Query: 1042 ARPDVLPPLPPAIDYPIYEQPISPPRKVENDRIPIGEYS-KNDNGRSLNPRTFEKNLTTD 1100
A +LP PP I +P P +P + R + DN + T +++
Sbjct: 433 ATQGLLPLFPPPIAFPFVPAPSAPFSTADVQRAQEKDIDCPMDNAQKELQETRKQDNFEA 492
Query: 1101 IVDCDTSTTPESYHGLPCGPMRASVESQSSEYDNFHAQPNTTGNFCRTFTKRRIVDASSS 1160
+ +S T ES G + E + S D +P F ++ D SS
Sbjct: 493 MKVIVSSETDESGK----GEVSLHTELKISPADKADTKPAAGAETSDVFGNKKKQDRSSC 548
Query: 1161 GLNTNTFVKNDKIDNKPRNRQKKGTNVQDSGYLSSDS 1197
G NT + + + DN P N++K + + +S +
Sbjct: 549 GSNTPS-SSDIEADNAPENQEKANDKAKQASCSNSSA 584
>01_01_0274 - 2263304-2264211,2264490-2264673
Length = 363
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 65 LFREDRELCVDDLPECALATFGTGLSNQRIPFVYLPLKGQ 104
LF R L + L C L T GT L +PF LPL+G+
Sbjct: 56 LFGMLRRLTLSPLLRCDLLTAGTELPEGTLPFKVLPLEGE 95
>08_02_0843 - 21759183-21759556,21760255-21762913
Length = 1010
Score = 31.1 bits (67), Expect = 5.9
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 360 HNQTTSALIHQHREFK-INRDNPELSHRDDSGIERLPDEHVSIVETT 405
HN A+IH+ + K I DN + H D GI +L D++ + ++TT
Sbjct: 829 HNDCHPAIIHRDIKPKNILLDNDMVPHISDFGIAKLMDQYPAALQTT 875
>03_02_0882 - 12121917-12124446,12124739-12124919,12125057-12125134,
12125731-12125764,12125864-12125975,12126053-12126238,
12126505-12126575
Length = 1063
Score = 31.1 bits (67), Expect = 5.9
Identities = 16/56 (28%), Positives = 24/56 (42%)
Query: 1177 PRNRQKKGTNVQDSGYLSSDSTNSTPFQRKLVVAKIVSCSESDDTENEARSESGAE 1232
P + KG N + +SS + P + AK+ TE++ SES AE
Sbjct: 245 PAEKDDKGENALHTRNISSHTIIQRPITNNVSPAKLAQIERESSTESDDSSESSAE 300
>11_06_0584 - 25220371-25222917
Length = 848
Score = 30.7 bits (66), Expect = 7.8
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 882 IEVKDPPENYIKI-HES--DGFEP--DTLDRKHTKHKDLMDNVQFSRRDFIKSIESIENE 936
I++KD PE +++ H + DG LD + K L+ + R D ++S+ S+
Sbjct: 578 IQIKDGPEAQLQLSHVASLDGLRKLGVVLDGREDNIKLLLTTIA-RRSDTLRSL-SVWIT 635
Query: 937 EGPPRQRIKLRSSGTFVKSDEKVLSTTKF 965
E PP + G FV D K +TT F
Sbjct: 636 EPPPEHSVTGERHGVFVTLDHKEKATTLF 664
>11_01_0574 + 4582098-4582331,4582450-4582492,4582683-4582757,
4584344-4584465,4584547-4584654,4585975-4586119,
4586786-4586869,4586997-4587345,4587527-4587666,
4587784-4588037,4588409-4588576,4588686-4588976,
4589329-4589538,4589778-4589860,4590288-4590414,
4593624-4595516,4596274-4596395,4596487-4596628,
4596719-4596940,4597489-4597563,4598351-4598452,
4598616-4598819
Length = 1730
Score = 30.7 bits (66), Expect = 7.8
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 1077 GEYSKNDNGRSLNPRTFEKNLTTDIVDCDTSTTPESYHGLPCGPMRASVESQSSEYDNFH 1136
G+ S N S+ R E ++ T VD TS T S P G + S E S Y
Sbjct: 1302 GKPSNNGASTSVEDREMETSVVT--VDPRTSDTSNSNGNAPLGSQK-SAERNGSLYVERE 1358
Query: 1137 AQPNTTGNFCRTFT 1150
+ GN C + T
Sbjct: 1359 KSDHVDGNMCASAT 1372
>04_04_0165 +
23247265-23247472,23248115-23248407,23249182-23249239,
23249302-23250014
Length = 423
Score = 30.7 bits (66), Expect = 7.8
Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
Query: 808 HPNYYETIRQTNDKSKSCKIINQDHDYSLVSEVYVNNNYNFGSTPTSPSGSECSMGSKKL 867
H ++ I +D +K+C + N +Y N + PT P C+ K++
Sbjct: 61 HNSHQTAINSPHDNAKACNLFNGTWVRDFGGPIYTNT-----TCPTIPEARNCAKYGKQM 115
Query: 868 ILTNALQEKPGC 879
N + + GC
Sbjct: 116 DYVNWMWKPHGC 127
>03_03_0206 + 15447054-15447181,15448243-15448298,15448373-15448515,
15448630-15448827,15448901-15449100,15449585-15449684,
15449769-15450350,15450434-15450556,15451028-15451108,
15451188-15451495,15451577-15451816,15452261-15452345,
15452429-15452606,15453053-15453227,15453826-15453982
Length = 917
Score = 30.7 bits (66), Expect = 7.8
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 1201 TPFQRKLVVAKIVSCSESDDTENEARSESGAESVETHSVFFNCFREQDINIESTSYNDSS 1260
T R V+++ CSE+D+ + R G S+ + ++ CF N+ S S+++
Sbjct: 33 TDVGRLACVSRLNLCSENDEIYQKPRHFDGFNSMHLYRRWYRCF----TNLSSFSFDNGH 88
Query: 1261 KSSQDD 1266
+DD
Sbjct: 89 VERKDD 94
>02_03_0127 +
15547048-15547302,15547511-15548459,15548562-15548677,
15548784-15548890,15550639-15550873,15550957-15551011,
15551802-15551893
Length = 602
Score = 30.7 bits (66), Expect = 7.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Query: 284 NKKDGLPITERDIIRITNERMQSLPNAMRQD 314
+ D LPI E DI+R E Q L RQD
Sbjct: 270 HSNDDLPINESDIVRFIEENQQVLHEQSRQD 300
>01_01_1106 + 8750597-8754031
Length = 1144
Score = 30.7 bits (66), Expect = 7.8
Identities = 24/83 (28%), Positives = 36/83 (43%)
Query: 225 PNAHVSDATTTSGLSISEYVAXXXXXXXXXXXXXASVLLFLHIRKRRKTSSEDKRRQGSN 284
P + DA T +S S + AS+L L IRK +SSE K Q
Sbjct: 975 PKPCLPDAITDLSISDSSEILSVRKMFGSSSSTSASLLRRLWIRKSDVSSSEWKLLQHRP 1034
Query: 285 KKDGLPITERDIIRITNERMQSL 307
K + L I +++R+ E ++ L
Sbjct: 1035 KLEELTIEYCEMLRVLAEPIRYL 1057
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.131 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,390,940
Number of Sequences: 37544
Number of extensions: 1662416
Number of successful extensions: 3221
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3214
Number of HSP's gapped (non-prelim): 18
length of query: 1266
length of database: 14,793,348
effective HSP length: 91
effective length of query: 1175
effective length of database: 11,376,844
effective search space: 13367791700
effective search space used: 13367791700
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 66 (30.7 bits)
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