Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001900-TA|BGIBMGA001900-PA|undefined
(1266 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92784-5|CAB07196.3| 554|Caenorhabditis elegans Hypothetical pr... 47 7e-05
Z68009-2|CAA92004.2| 891|Caenorhabditis elegans Hypothetical pr... 34 0.74
Z48334-4|CAB61010.2| 426|Caenorhabditis elegans Hypothetical pr... 34 0.74
AF143297-1|AAD33902.1| 426|Caenorhabditis elegans tubby homolog... 34 0.74
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 33 1.3
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 32 2.3
AF039047-14|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m... 32 2.3
AF039047-13|AAM15589.1| 978|Caenorhabditis elegans Human mlk (m... 32 2.3
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 32 3.0
AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical... 31 4.0
AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical... 31 4.0
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 31 4.0
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 31 5.2
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 31 5.2
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 31 5.2
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 31 5.2
U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger pro... 31 6.9
L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger pro... 31 6.9
L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger pro... 31 6.9
AL032630-3|CAA21560.1| 214|Caenorhabditis elegans Hypothetical ... 31 6.9
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 30 9.2
Z48009-11|CAA88088.2| 467|Caenorhabditis elegans Hypothetical p... 30 9.2
>Z92784-5|CAB07196.3| 554|Caenorhabditis elegans Hypothetical
protein F31C3.6a protein.
Length = 554
Score = 47.2 bits (107), Expect = 7e-05
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 403 ETTDDREIMRPVGTT--RRKLYFNPAYFEPQLMAEPPEAALEFLTKIREVISIAKHKMAT 460
E +++EI++ + R++L F+ YF+ M P A++FL +R V+ +AK ++
Sbjct: 316 EEIEEQEILQSHSQSLNRKRLIFSSEYFDSAQMTHPSPLAIQFLYDLRRVVDVAKERIRQ 375
Query: 461 KRFQPVLNEIPEE 473
+RF P L I E+
Sbjct: 376 RRFIPALPVIIED 388
Score = 42.3 bits (95), Expect = 0.002
Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 17/163 (10%)
Query: 55 CACVCPQRAPLFREDRELCVDDLPECALATFGTGLSNQRIPFVYLPLKGQIIHPSREITF 114
C+C+CP P + CVD L +C+ T N IP V L I+ P E+ F
Sbjct: 82 CSCICPLATPSYVSTVGKCVDRLNDCS-NTIRWKSINFAIPVVQLQ-PHTIVLPDAELDF 139
Query: 115 Q--NVKTPICAVSGAQFLTRKGFVDIRNTLDADVP-----FNLFRDEGRTFLQWNGENDV 167
+ ++T +K + NT + F L G+ + + G
Sbjct: 140 RGAGIRTSSRGADEWNCSIKKIMYENLNTKWRSIAKERGIFQLTSSNGKPIVYFGGTEFD 199
Query: 168 RARMTGRVMLVRLLCRDVAATPNSPLDLRGVFTPCVAFRVQGT 210
+ +TG V++++L C+ + ++P C++ R+ GT
Sbjct: 200 ASFLTGAVVMIKLDCKTFMSAVSAPF--------CISLRIAGT 234
>Z68009-2|CAA92004.2| 891|Caenorhabditis elegans Hypothetical
protein R09A8.2 protein.
Length = 891
Score = 33.9 bits (74), Expect = 0.74
Identities = 43/187 (22%), Positives = 71/187 (37%), Gaps = 15/187 (8%)
Query: 809 PNYYETIRQTNDKSKSCKIINQDHDYSLVSEVYVNNNYNFGSTPTSPSGSECSMGSKKLI 868
PNY I + DK+K K+ + DY + + + + FG PTSP ++G+
Sbjct: 229 PNYPHVIEE--DKTK--KLASALQDYRTLRDATPDKTFYFGEIPTSP----INVGTHDDQ 280
Query: 869 LTNALQEKPGCLTIEVKDPPENYIKIHES-DGFEPDTLDRKHTKHKDLMDNVQFSRRDFI 927
L N + G T+ +K + +P HK L ++ +
Sbjct: 281 LCNGMNSISG-NTLNTSYEETRQLKNSDHVKQIDPQMKGNSVDAHKGLQFSMTVQNSSCL 339
Query: 928 KSIESIENEEGPPRQRIKLRSSGTFVKSDEKVLSTTKFHSL--RNACDQRKPIHDRPKLS 985
S + ++ R + +S FVKS+ + L L +N CD K + L
Sbjct: 340 SSDGNTSTDD---RVNAQCFASSGFVKSERRRLEQLMEQKLKEKNQCDYAKKTRNSSALD 396
Query: 986 VTSFSGS 992
S GS
Sbjct: 397 HESSFGS 403
>Z48334-4|CAB61010.2| 426|Caenorhabditis elegans Hypothetical protein
F10B5.4 protein.
Length = 426
Score = 33.9 bits (74), Expect = 0.74
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 1046 VLPPLPPAIDYPIYEQPISPPRKVENDRIPIGEYSKNDNGRSLNPRTFEKNLTTDIVDCD 1105
++P P + P P++V+ I IG+Y ND +N + + NLT+ +V D
Sbjct: 75 LIPTQDPIAQPRMQSMPRQQPQQVQESLISIGDYPDND----INAKLSKVNLTSCVVSDD 130
Query: 1106 TSTTPESYHGLP 1117
SY P
Sbjct: 131 EDEDKRSYADSP 142
>AF143297-1|AAD33902.1| 426|Caenorhabditis elegans tubby homolog
protein.
Length = 426
Score = 33.9 bits (74), Expect = 0.74
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 1046 VLPPLPPAIDYPIYEQPISPPRKVENDRIPIGEYSKNDNGRSLNPRTFEKNLTTDIVDCD 1105
++P P + P P++V+ I IG+Y ND +N + + NLT+ +V D
Sbjct: 75 LIPTQDPIAQPRMQSMPRQQPQQVQESLISIGDYPDND----INAKLSKVNLTSCVVSDD 130
Query: 1106 TSTTPESYHGLP 1117
SY P
Sbjct: 131 EDEDKRSYADSP 142
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 33.1 bits (72), Expect = 1.3
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 4/116 (3%)
Query: 1151 KRRIVDASSSGLNTNTFVKNDKIDNKPRNRQKKGTNVQDSGYLSSDSTNSTPFQRKLVVA 1210
K+ D SS +++ +DK K + + KK ++ SSDS++ ++K
Sbjct: 75 KQESSDDSSDNSDSSESSDDDKKSKKKKKKSKKDSSDSSDSSDSSDSSDDGKKKKKKKSK 134
Query: 1211 KIVSCSESDDTENEARSESGAESVETHSVFFNCFREQDINIESTSYNDSSKSSQDD 1266
K SDD+ + + S ++S + ++ S+ +DSS S DD
Sbjct: 135 K----DSSDDSSDSSDSSDSSDSSDDDKKKKKKSKKSKNKGSSSDSSDSSDDSSDD 186
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 32.3 bits (70), Expect = 2.3
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 1200 STPFQRKLVVAKIVSCSESDDTENEARSESGAESVE 1235
+TP +K +V K+ + S DD+E A S+ G + VE
Sbjct: 726 ATPAVQKKIVPKVAADSSGDDSEEVASSDEGIQEVE 761
>AF039047-14|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (mixed
lineage kinase)homolog protein 1, isoform a protein.
Length = 1040
Score = 32.3 bits (70), Expect = 2.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 1044 PDVLPPLPPAIDYPIYEQPISPPRKV 1069
PD+ PLPP + YPI ISP +V
Sbjct: 976 PDIPAPLPPVVTYPIPASLISPSNRV 1001
>AF039047-13|AAM15589.1| 978|Caenorhabditis elegans Human mlk (mixed
lineage kinase)homolog protein 1, isoform b protein.
Length = 978
Score = 32.3 bits (70), Expect = 2.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 1044 PDVLPPLPPAIDYPIYEQPISPPRKV 1069
PD+ PLPP + YPI ISP +V
Sbjct: 914 PDIPAPLPPVVTYPIPASLISPSNRV 939
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical protein
C31C9.6 protein.
Length = 965
Score = 31.9 bits (69), Expect = 3.0
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
Query: 1031 TPPTIKQLKNLARPDVLPPLPPAIDYPIYEQPISPPRKVENDRIPIGEYSKNDNGRSLNP 1090
+PP L +A P +PP PP P EQ IS P V +P N + RSL
Sbjct: 488 SPPPPPPLPPIATPSSVPPPPP--PPPALEQEISGPPTVRLTAVP----ESNSDRRSLMD 541
Query: 1091 RTFEKNLTTDIVDCDTSTTPESYHGLPCGPMRASVESQSSEY 1132
+ +++ V S TP++ +P P ++ Q +
Sbjct: 542 QI--RSIDRSQVLRKVSDTPDTRQSVP-SPTSGTIVDQIQNF 580
>AL110479-24|CAJ76966.1| 1084|Caenorhabditis elegans Hypothetical
protein Y105C5B.21b protein.
Length = 1084
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 887 PPENYIKIHESDG-FEPDTLDRKHTKHKDLMDNVQFSRRDFIKSIESIENEEGPP 940
PP +++ I S F DT++ H H D++ V+ R + ++ E PP
Sbjct: 444 PPSDFVHIEPSTNRFSSDTMESPHLGHHDVVKYVEAERFGAVPLLQEEMVRESPP 498
>AL110479-23|CAB60320.2| 1254|Caenorhabditis elegans Hypothetical
protein Y105C5B.21a protein.
Length = 1254
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 887 PPENYIKIHESDG-FEPDTLDRKHTKHKDLMDNVQFSRRDFIKSIESIENEEGPP 940
PP +++ I S F DT++ H H D++ V+ R + ++ E PP
Sbjct: 614 PPSDFVHIEPSTNRFSSDTMESPHLGHHDVVKYVEAERFGAVPLLQEEMVRESPP 668
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 31.5 bits (68), Expect = 4.0
Identities = 18/81 (22%), Positives = 33/81 (40%)
Query: 741 TDSLERNSNKKGVVTPTEYPDVPSSQASPSLSNALPLEEELTMRNAIYKIXXXXXXXTPS 800
+D ++ + V P++ V + ++ LS E +L + K+ P
Sbjct: 2486 SDQKPKSQLETSVALPSKSAKVSTKKSEKDLSPLKSTELQLERKFLKNKVHNRRSSRAPG 2545
Query: 801 PHHDITLHPNYYETIRQTNDK 821
HH LHP + T +T+ K
Sbjct: 2546 IHHQRPLHPRWLPTDHETDRK 2566
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical protein
F07C6.4c protein.
Length = 571
Score = 31.1 bits (67), Expect = 5.2
Identities = 28/99 (28%), Positives = 34/99 (34%), Gaps = 6/99 (6%)
Query: 968 LRNACDQRKP-----IHDRPKLSVTSFSGSKSLDSXXXXXXXXXXXXNSDE-GRILTLEL 1021
LRN D K + DR S SL SD G L
Sbjct: 235 LRNGLDDEKDEFDENVEDRVSRRAPSAISRHSLSQRYSGVSSSSTSSGSDSMGLGLPPRP 294
Query: 1022 RHSKRQRQSTPPTIKQLKNLARPDVLPPLPPAIDYPIYE 1060
K Q+Q T P QL N ++ PP A +P+YE
Sbjct: 295 TSRKSQQQQTTPFDDQLDNPMICEIPPPPSSAAAHPLYE 333
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical protein
F07C6.4b protein.
Length = 639
Score = 31.1 bits (67), Expect = 5.2
Identities = 28/99 (28%), Positives = 34/99 (34%), Gaps = 6/99 (6%)
Query: 968 LRNACDQRKP-----IHDRPKLSVTSFSGSKSLDSXXXXXXXXXXXXNSDE-GRILTLEL 1021
LRN D K + DR S SL SD G L
Sbjct: 303 LRNGLDDEKDEFDENVEDRVSRRAPSAISRHSLSQRYSGVSSSSTSSGSDSMGLGLPPRP 362
Query: 1022 RHSKRQRQSTPPTIKQLKNLARPDVLPPLPPAIDYPIYE 1060
K Q+Q T P QL N ++ PP A +P+YE
Sbjct: 363 TSRKSQQQQTTPFDDQLDNPMICEIPPPPSSAAAHPLYE 401
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical protein
F07C6.4c protein.
Length = 571
Score = 31.1 bits (67), Expect = 5.2
Identities = 28/99 (28%), Positives = 34/99 (34%), Gaps = 6/99 (6%)
Query: 968 LRNACDQRKP-----IHDRPKLSVTSFSGSKSLDSXXXXXXXXXXXXNSDE-GRILTLEL 1021
LRN D K + DR S SL SD G L
Sbjct: 235 LRNGLDDEKDEFDENVEDRVSRRAPSAISRHSLSQRYSGVSSSSTSSGSDSMGLGLPPRP 294
Query: 1022 RHSKRQRQSTPPTIKQLKNLARPDVLPPLPPAIDYPIYE 1060
K Q+Q T P QL N ++ PP A +P+YE
Sbjct: 295 TSRKSQQQQTTPFDDQLDNPMICEIPPPPSSAAAHPLYE 333
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical protein
F07C6.4b protein.
Length = 639
Score = 31.1 bits (67), Expect = 5.2
Identities = 28/99 (28%), Positives = 34/99 (34%), Gaps = 6/99 (6%)
Query: 968 LRNACDQRKP-----IHDRPKLSVTSFSGSKSLDSXXXXXXXXXXXXNSDE-GRILTLEL 1021
LRN D K + DR S SL SD G L
Sbjct: 303 LRNGLDDEKDEFDENVEDRVSRRAPSAISRHSLSQRYSGVSSSSTSSGSDSMGLGLPPRP 362
Query: 1022 RHSKRQRQSTPPTIKQLKNLARPDVLPPLPPAIDYPIYE 1060
K Q+Q T P QL N ++ PP A +P+YE
Sbjct: 363 TSRKSQQQQTTPFDDQLDNPMICEIPPPPSSAAAHPLYE 401
>U20555-1|AAC46918.1| 839|Caenorhabditis elegans zinc finger protein
protein.
Length = 839
Score = 30.7 bits (66), Expect = 6.9
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 1137 AQPNTTGNFCRTFTKRRIVDASSSGLNTNTFVKNDKIDNKPRNRQKKGTNVQDSGYLSSD 1196
+QP+T+ N T +V+ ++ N+ N N P + + + G +S +
Sbjct: 517 SQPSTSTNGGPNVTIPAVVEVHTNSTNSTNHQNNGLTQNAPASTSMQAGTSSNDGVISQN 576
Query: 1197 STNSTPFQRKL 1207
T+ST +L
Sbjct: 577 GTSSTSQSNRL 587
>L23645-6|AAO91714.1| 635|Caenorhabditis elegans Zinc finger protein
protein 1,isoform c protein.
Length = 635
Score = 30.7 bits (66), Expect = 6.9
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 1137 AQPNTTGNFCRTFTKRRIVDASSSGLNTNTFVKNDKIDNKPRNRQKKGTNVQDSGYLSSD 1196
+QP+T+ N T +V+ ++ N+ N N P + + + G +S +
Sbjct: 285 SQPSTSTNGGPNVTIPAVVEVHTNSTNSTNHQNNGLTQNAPASTSMQAGTSSNDGVISQN 344
Query: 1197 STNSTPFQRKL 1207
T+ST +L
Sbjct: 345 GTSSTSQSNRL 355
>L23645-4|AAK26137.1| 867|Caenorhabditis elegans Zinc finger protein
protein 1,isoform a protein.
Length = 867
Score = 30.7 bits (66), Expect = 6.9
Identities = 16/71 (22%), Positives = 31/71 (43%)
Query: 1137 AQPNTTGNFCRTFTKRRIVDASSSGLNTNTFVKNDKIDNKPRNRQKKGTNVQDSGYLSSD 1196
+QP+T+ N T +V+ ++ N+ N N P + + + G +S +
Sbjct: 517 SQPSTSTNGGPNVTIPAVVEVHTNSTNSTNHQNNGLTQNAPASTSMQAGTSSNDGVISQN 576
Query: 1197 STNSTPFQRKL 1207
T+ST +L
Sbjct: 577 GTSSTSQSNRL 587
>AL032630-3|CAA21560.1| 214|Caenorhabditis elegans Hypothetical
protein Y62H9A.3 protein.
Length = 214
Score = 30.7 bits (66), Expect = 6.9
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 12/68 (17%)
Query: 1044 PDVLPPLPPAIDYPIYEQPISPPRKVENDRIPI----------GEYSKNDNGRSLNPRTF 1093
PD L PLPPA YP+ P S P + +PI G Y ++NG S PR +
Sbjct: 46 PD-LGPLPPA-SYPVPNFPNSWPLPPASRLVPIPQEYPAPFPPGPYPDSENGGSYPPRNY 103
Query: 1094 EKNLTTDI 1101
E D+
Sbjct: 104 EVKKLKDL 111
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical protein
F59B10.2 protein.
Length = 482
Score = 30.3 bits (65), Expect = 9.2
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 1174 DNKPRNRQKKGTNVQDSGYLSSDSTNSTPFQRKLVVAKIVSCSESDDTENEARSESGAES 1233
+ K R +++K +S + SS ++ST S S + ++E+E++SES S
Sbjct: 198 EQKARKKKEKTPTPTESSFESSSDSSSTSESS----TSSESSSSASESESESKSESQVSS 253
Query: 1234 VETHSVFFNCFREQDINIESTSYNDSSKSS 1263
+T + + + + ES + SS S+
Sbjct: 254 SKTSTSKASSSKAYGSDFESEKSSSSSAST 283
>Z48009-11|CAA88088.2| 467|Caenorhabditis elegans Hypothetical
protein AH6.5 protein.
Length = 467
Score = 30.3 bits (65), Expect = 9.2
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 730 NTEIPSGNEYETDSLERNSNKKG-VVTPTEYPDVPSSQAS 768
+T +P+ EYET +RN N + P E+ D+P + S
Sbjct: 189 STPLPTSREYETVQRDRNRNSQSRYQCPIEHDDLPIDEIS 228
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.131 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,744,882
Number of Sequences: 27539
Number of extensions: 1527974
Number of successful extensions: 3488
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3464
Number of HSP's gapped (non-prelim): 34
length of query: 1266
length of database: 12,573,161
effective HSP length: 90
effective length of query: 1176
effective length of database: 10,094,651
effective search space: 11871309576
effective search space used: 11871309576
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 65 (30.3 bits)
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