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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001900-TA|BGIBMGA001900-PA|undefined
         (1266 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g07520.1 68416.m00896 glutamate receptor family protein (GLR1...    35   0.40 
At1g20450.1 68414.m02548 dehydrin (ERD10) identical to dehydrin ...    33   0.92 
At5g62470.2 68418.m07840 myb family transcription factor (MYB96)...    33   1.2  
At5g62470.1 68418.m07839 myb family transcription factor (MYB96)...    33   1.2  
At3g13120.1 68416.m01642 30S ribosomal protein S10, chloroplast,...    33   1.2  
At5g65630.1 68418.m08256 DNA-binding bromodomain-containing prot...    32   2.1  
At4g02530.1 68417.m00346 chloroplast thylakoid lumen protein SP:...    32   2.1  
At5g21160.1 68418.m02528 La domain-containing protein / proline-...    32   2.8  
At4g02720.1 68417.m00368 expressed protein temporary automated f...    32   2.8  
At5g40450.1 68418.m04905 expressed protein                             31   3.7  
At3g21100.1 68416.m02667 RNA recognition motif (RRM)-containing ...    31   3.7  
At3g10440.1 68416.m01252 hypothetical protein                          31   3.7  
At1g20450.2 68414.m02549 dehydrin (ERD10) identical to dehydrin ...    31   3.7  
At3g20350.1 68416.m02578 expressed protein                             31   4.9  
At1g26150.1 68414.m03192 protein kinase family protein similar t...    31   4.9  
At4g02460.1 68417.m00333 DNA mismatch repair protein, putative s...    31   6.5  
At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1 GI...    31   6.5  
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa...    31   6.5  
At2g17950.1 68415.m02080 homeodomain transcription factor (WUSCH...    30   8.6  

>At3g07520.1 68416.m00896 glutamate receptor family protein (GLR1.4)
           plant glutamate receptor family, PMID:11379626
          Length = 861

 Score = 34.7 bits (76), Expect = 0.40
 Identities = 18/54 (33%), Positives = 30/54 (55%)

Query: 911 KHKDLMDNVQFSRRDFIKSIESIENEEGPPRQRIKLRSSGTFVKSDEKVLSTTK 964
           KHK L  +++F  + FI     I N  G   + + L +SG+F+ +  + LS+TK
Sbjct: 364 KHKGLSGDIKFIDKKFISDKFEIVNMIGRGERSVGLWNSGSFISNRRRRLSSTK 417


>At1g20450.1 68414.m02548 dehydrin (ERD10) identical to dehydrin
           ERD10 (Low-temperature-induced protein LTI45)
           [Arabidopsis thaliana] SWISS-PROT:P42759
          Length = 260

 Score = 33.5 bits (73), Expect = 0.92
 Identities = 22/99 (22%), Positives = 46/99 (46%), Gaps = 5/99 (5%)

Query: 888 PENYIKIHESDGFEPDTLDRKHTKHKDLMDNVQFSRRDFI----KSIESIENEEGPPRQR 943
           PE+++  HE +  +P  L++ H KH++  +N + S  D +     S  S  +EEG   ++
Sbjct: 63  PESFVAKHEEEEHKPTLLEQLHQKHEEEEEN-KPSLLDKLHRSNSSSSSSSDEEGEDGEK 121

Query: 944 IKLRSSGTFVKSDEKVLSTTKFHSLRNACDQRKPIHDRP 982
            K       V+ D       +   + +   ++ P+ ++P
Sbjct: 122 KKKEKKKKIVEGDHVKTVEEENQGVMDRIKEKFPLGEKP 160


>At5g62470.2 68418.m07840 myb family transcription factor (MYB96)
            contains Pfam profile: PF00249 myb-like DNA-binding
            domain
          Length = 352

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 46/190 (24%), Positives = 69/190 (36%), Gaps = 12/190 (6%)

Query: 1070 ENDRIPIGEYSKNDNGRSLNPRTFEKNLTTDIVDCDTSTTPESYHGLPCGPMRASVESQS 1129
            +ND +     S   N +S N   +E+ L TDI              L      +++ S S
Sbjct: 126  DNDGVSSSNTSSQKNHQSTNKGQWERRLQTDI----NMAKQALCEALSLDKPSSTLSSSS 181

Query: 1130 SEYDNFHAQPNTTGNFCRTFTKRRIVDASSSGLNTNTFVKNDKIDNKPRNRQKKGTNVQD 1189
            S       Q N   NF      R    +SSS   T T   N      P       ++ ++
Sbjct: 182  SLPTPVITQQNIR-NFSSALLDRCYDPSSSSSSTTTTTTSN---TTNPYPSGVYASSAEN 237

Query: 1190 SGYLSSDSTNSTPFQRKLVVAKIVSCSESDDTENEARSESGAESVETHSVFFNCFRE-QD 1248
               L  D    TP  + L ++     SE+      A SE G E  E     FN   E Q+
Sbjct: 238  IARLLQDFMKDTP--KALTLSSSSPVSETGPL-TAAVSEEGGEGFEQSFFSFNSMDETQN 294

Query: 1249 INIESTSYND 1258
            +  E++ ++D
Sbjct: 295  LTQETSFFHD 304


>At5g62470.1 68418.m07839 myb family transcription factor (MYB96)
            contains Pfam profile: PF00249 myb-like DNA-binding
            domain
          Length = 351

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 46/190 (24%), Positives = 69/190 (36%), Gaps = 12/190 (6%)

Query: 1070 ENDRIPIGEYSKNDNGRSLNPRTFEKNLTTDIVDCDTSTTPESYHGLPCGPMRASVESQS 1129
            +ND +     S   N +S N   +E+ L TDI              L      +++ S S
Sbjct: 125  DNDGVSSSNTSSQKNHQSTNKGQWERRLQTDI----NMAKQALCEALSLDKPSSTLSSSS 180

Query: 1130 SEYDNFHAQPNTTGNFCRTFTKRRIVDASSSGLNTNTFVKNDKIDNKPRNRQKKGTNVQD 1189
            S       Q N   NF      R    +SSS   T T   N      P       ++ ++
Sbjct: 181  SLPTPVITQQNIR-NFSSALLDRCYDPSSSSSSTTTTTTSN---TTNPYPSGVYASSAEN 236

Query: 1190 SGYLSSDSTNSTPFQRKLVVAKIVSCSESDDTENEARSESGAESVETHSVFFNCFRE-QD 1248
               L  D    TP  + L ++     SE+      A SE G E  E     FN   E Q+
Sbjct: 237  IARLLQDFMKDTP--KALTLSSSSPVSETGPL-TAAVSEEGGEGFEQSFFSFNSMDETQN 293

Query: 1249 INIESTSYND 1258
            +  E++ ++D
Sbjct: 294  LTQETSFFHD 303


>At3g13120.1 68416.m01642 30S ribosomal protein S10, chloroplast,
            putative similar to 30S ribosomal protein S10 GB:P02364
            [Escherichia coli] (est matches suggest the N-terminal
            extension)
          Length = 191

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 16/44 (36%), Positives = 22/44 (50%)

Query: 1031 TPPTIKQLKNLARPDVLPPLPPAIDYPIYEQPISPPRKVENDRI 1074
            T P++   K  A PD L P P  +D P  E P S    V+ D++
Sbjct: 46   TKPSVSLTKVFAVPDTLDPTPEILDEPASEVPSSSSISVDADKM 89


>At5g65630.1 68418.m08256 DNA-binding bromodomain-containing protein
            similar to 5.9 kb fsh membrane protein [Drosophila
            melanogaster] GI:157455; contains Pfam profile PF00439:
            Bromodomain
          Length = 590

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 1025 KRQRQSTPPTIKQLKNLARPDVLPPLPPAIDYPIYEQPISPPRKVEND-RIP--IGEYSK 1081
            K  + + PP + +   +  P   PP PP +  P   QP  PP ++E +   P  + E SK
Sbjct: 328  KPPQPTLPPQLVEPSRVQSPS--PPPPPPVIQPELPQPQPPPPQLEIEVEAPPDVSEVSK 385

Query: 1082 NDNGRSLNPRTFEKN 1096
               G+   P+  + N
Sbjct: 386  GRKGKLPKPKAKDPN 400


>At4g02530.1 68417.m00346 chloroplast thylakoid lumen protein
           SP:022773 ;TL16_ARATH
          Length = 216

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 18/60 (30%), Positives = 32/60 (53%)

Query: 361 NQTTSALIHQHREFKINRDNPELSHRDDSGIERLPDEHVSIVETTDDREIMRPVGTTRRK 420
           NQT+S+L+ + RE  +   +  ++    S   R  D + +I+E  DD E++  V   R+K
Sbjct: 35  NQTSSSLLWKRRELSLGFMSSLVAIGLVSNDRRRHDANAAILEADDDEELLEKVKQDRKK 94


>At5g21160.1 68418.m02528 La domain-containing protein / proline-rich
            family protein contains proline-rich extensin domains,
            INTERPRO:IPR002965, PF05383: La domain
          Length = 826

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 15/164 (9%)

Query: 1054 IDYPIYEQPISPPRKVENDRIPIGEYSKNDNGRSLNPRTFEKNLTTDIVDCDTSTTPESY 1113
            +D+ +Y    S   +V+ D+I      K D      P + +      I D D  +     
Sbjct: 329  VDFIVYALGFSNSVEVQGDQI-----RKRDKWSDWIPASKKSTSAETIGDGDKDSPKSIT 383

Query: 1114 HGLPCG-PMRASVESQSSEYDNFHAQPNTTGNF------CRTFTKRRIVDASSSGLNTNT 1166
             G   G P + S +   S++ +  AQ + T N+           KR + D S+    +NT
Sbjct: 384  SGDNFGNPSKGSSKPTVSDFSSEGAQSSRTNNYKSGNLKSSADEKRNVEDLSNDF--SNT 441

Query: 1167 FVKNDKIDNKPRNRQKKGTNVQDS-GYLSSDSTNSTPFQRKLVV 1209
            F+ ++++D + R+ +K G ++  S  Y   D        +KLV+
Sbjct: 442  FLLDEELDLEHRSPRKSGLSMSKSIEYEDDDMAVDDQDIQKLVI 485


>At4g02720.1 68417.m00368 expressed protein temporary automated
            functional assignment
          Length = 422

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 17/51 (33%), Positives = 25/51 (49%)

Query: 1216 SESDDTENEARSESGAESVETHSVFFNCFREQDINIESTSYNDSSKSSQDD 1266
            SESD  E + R    + S    S     FR++  +   T Y+DS +SS +D
Sbjct: 140  SESDSEEEDRRRRRKSSSKRKKSRSSRSFRKKRSHRRKTKYSDSDESSDED 190


>At5g40450.1 68418.m04905 expressed protein
          Length = 2910

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 361  NQTTSALIHQHREFKINRDNPELSHRDDSGIERLPDEHVSIVETTDDREIMRPVGTTR 418
            N+T   +   H E  +N + P+L    D   + +P E     ETT D+ +  P+GT++
Sbjct: 2013 NETERTVALDHEEEFVNHEAPKLEETKDEKSQEIP-ETAKATETTIDQTL--PIGTSQ 2067


>At3g21100.1 68416.m02667 RNA recognition motif (RRM)-containing
           protein contains Pfam profile:PF00076 RNA recognition
           motif
          Length = 602

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 14/50 (28%), Positives = 28/50 (56%)

Query: 683 PDMINEAVALDSSKAYNEASSSDDEKLNGNILDELNEGRHIALLNRRNTE 732
           P+MI+      SS   ++ +++ D   NG+ LDE   G +++ LN  +++
Sbjct: 117 PNMISSPFQASSSLFASDGAAAGDSTGNGDFLDEQQLGNYLSFLNESSSK 166


>At3g10440.1 68416.m01252 hypothetical protein
          Length = 556

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)

Query: 1137 AQPNTTGNFCRTFTKRRIVDASSSG-LNTNTFVKNDKIDNKPRNRQKKGTNVQDSGYLSS 1195
            AQ N  G  C+TF         +SG  N N+  +N+K ++K R   +K     +   +  
Sbjct: 153  AQANACGGACKTFQPNDADHEHASGSSNANSLQRNEKANSKRRVSGRKNPANSEVLDIIG 212

Query: 1196 DSTNSTPFQRKLVVAKIVSCSESD 1219
             S  +   +  +   K+VS S++D
Sbjct: 213  RSGETCQMEDNIDNKKLVSDSDND 236


>At1g20450.2 68414.m02549 dehydrin (ERD10) identical to dehydrin
           ERD10 (Low-temperature-induced protein LTI45)
           [Arabidopsis thaliana] SWISS-PROT:P42759
          Length = 259

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 20/78 (25%), Positives = 40/78 (51%), Gaps = 7/78 (8%)

Query: 888 PENYIKIHESDGFEPDTLDRKHTKHKDLMDNV-----QFSRRDFIKSIESIENEEGPPRQ 942
           PE+++  HE +  +P  L++ H KH++  +N      +  R +   S  S + E+G  ++
Sbjct: 63  PESFVAKHEEEEHKPTLLEQLHQKHEEEEENKPSLLDKLHRSNSSSSSVSKKGEDGEKKK 122

Query: 943 RIKLRS--SGTFVKSDEK 958
           + K +    G  VK+ E+
Sbjct: 123 KEKKKKIVEGDHVKTVEE 140


>At3g20350.1 68416.m02578 expressed protein 
          Length = 673

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 39/173 (22%), Positives = 65/173 (37%), Gaps = 4/173 (2%)

Query: 351 SVMSDDNLYHN-QTTSALIHQHREFKINRDNPE-LSHRDDSGIERLPDEHVSIVETTDDR 408
           +V  D NL +  + ++A   Q+ EF+ +    E +SH ++ G    PDE +  +  T  R
Sbjct: 478 TVSPDVNLINKGRHSNAFTDQNGEFEEDDSGWETVSHSEEHGSSYSPDESIPNISNTHHR 537

Query: 409 EIMRPVGTTRRKLYFNPAYFEPQLMAEPPEAALEFLTKIREVISIAKHKMATKRFQPVLN 468
                +  T  +        E   +       L  + K+   +     +++  R   V  
Sbjct: 538 NSNVSMNGTEYEKTLLREIKEVCSVPRRQSKKLPSMAKLWSSLEGMNGRVSNARKSTVEM 597

Query: 469 EIPEEETYSSSGNNLDLYQRLGSQKSDSVFSLKRDNSRRKDCIGCPGCQSGNS 521
             PE  +     N LDL  +  S    +  +L R    RK CI  P     NS
Sbjct: 598 VSPETGSNKGGFNTLDLVGQWSSSPDSANANLNRGG--RKGCIEWPRGAHKNS 648


>At1g26150.1 68414.m03192 protein kinase family protein similar to Pto
            kinase interactor 1 GI:3668069 from [Lycopersicon
            esculentum]
          Length = 760

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 6/46 (13%)

Query: 1023 HSKRQRQSTPPTIKQLKNLARPDVLPPLPPAIDYPIYEQPISPPRK 1068
            H KR+ Q  PP  K      RP   PP P     P++  P SPP +
Sbjct: 224  HPKRREQPPPPGSK------RPTPSPPSPSDSKRPVHPSPPSPPEE 263


>At4g02460.1 68417.m00333 DNA mismatch repair protein, putative
            similar to SP|P54278 PMS1 protein homolog 2 (DNA mismatch
            repair protein PMS2) {Homo sapiens}; contains Pfam
            profiles PF02518: ATPase, histidine kinase-, DNA gyrase
            B-, and HSP90-like domain protein, PF01119: DNA mismatch
            repair protein, C-terminal domain
          Length = 923

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 1175 NKPRNRQKKGTNVQDSGYLSSDSTNSTPFQRKLVVAKIVSCSESDDTENEARSESGAES 1233
            N    R ++ + +Q +GY+S     +TP  +K   A  +  S+ DD E +AR+ + A S
Sbjct: 635  NLRTRRLERLSRLQSTGYVSK--CMNTPQPKKCFAAATLELSQPDDEERKARALAAATS 691


>At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1
            GI:5566292 from [Drosophila melanogaster]; contains
            prosite evidence: PS00383: Tyrosine specific protein
            phosphatases active site
          Length = 632

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 9/147 (6%)

Query: 1041 LARPDVLPPLPPAIDYPIYEQPISPPRKVENDRIPI-GEYSKNDNGRSLNPRTFEKNL-- 1097
            ++  DVL P P      + + P+S  R+   D I      +K D+ +     T  + L  
Sbjct: 16   VSEKDVLIPEPSENTVGVVQDPVSAEREAHEDSISTEASVAKVDDTQMPASSTGSEPLSK 75

Query: 1098 TTDIVDCDTSTTPESYHGLPCGPMRASVESQSSEYDNFHAQPNTTGNFCRTFTKRRIVDA 1157
            T DIV C   ++P      P     + + S +  +      PN T +    FT+      
Sbjct: 76   TDDIVPCPPGSSPR--ESPPSIFSSSGLSSWAKSFKFQQQDPNRTDSGMSAFTR----FT 129

Query: 1158 SSSGLNTNTFVKNDKIDNKPRNRQKKG 1184
            S  GL+  T    +  D++  N Q  G
Sbjct: 130  SELGLHLPTKGSEEVGDSRSSNTQVGG 156


>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin family
            protein similar to arabinogalactan protein [Daucus
            carota] GI:11322245; contains Pfam profile PF01190:
            Pollen proteins Ole e I family
          Length = 359

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 1032 PPTIKQLKNLARPDVLPPLPPAIDYPIYEQPISPPRKVENDRIPIGEYSKNDNGRSLNPR 1091
            PPT   +K   +P V PP+ P    P+ + P+ PP K    + P+   +K      + P 
Sbjct: 166  PPTKAPVKPPTKPPVKPPVSPPAKPPV-KPPVYPPTKAP-VKPPVSPPTKPPVTPPVYPP 223

Query: 1092 TFEKNL 1097
             F ++L
Sbjct: 224  KFNRSL 229



 Score = 30.3 bits (65), Expect = 8.6
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 1032 PPTIKQLKNLARPDVLPPLPPAIDYPIYEQPISPPRK 1068
            PPT   +K   +P V PP+ P    P+ + P+ PP K
Sbjct: 94   PPTKAPVKPPTKPPVKPPVSPPAKPPV-KPPVYPPTK 129


>At2g17950.1 68415.m02080 homeodomain transcription factor (WUSCHEL)
           99.4% identical to WUSCHELL (GI:4090200) [Arabidopsis
           thaliana]
          Length = 292

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 5/104 (4%)

Query: 580 MSLPPLTENRVPKIRKQHSFTTSSSMNNGDDFYVPKNSGTMSIRSEPGVRNHNLPLPEFD 639
           M+ P  + N V      H +      ++G     P NS  + +  +  + +HN P P F+
Sbjct: 106 MTTPSSSPNSVMMAANDH-YHPLLHHHHGVPMQRPANSVNVKLNQDHHLYHHNKPYPSFN 164

Query: 640 --NITYSRYGQNIAEVNDMNALDVEHYFSGIPRKIDYIPKNNNV 681
             N+ ++  G     VN  N     H +  + +  D     NNV
Sbjct: 165 NGNLNHASSGTECGVVNASNGYMSSHVYGSMEQ--DCSMNYNNV 206


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.314    0.131    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,792,033
Number of Sequences: 28952
Number of extensions: 1404938
Number of successful extensions: 3167
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 3138
Number of HSP's gapped (non-prelim): 40
length of query: 1266
length of database: 12,070,560
effective HSP length: 90
effective length of query: 1176
effective length of database: 9,464,880
effective search space: 11130698880
effective search space used: 11130698880
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 65 (30.3 bits)

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