Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001899-TA|BGIBMGA001899-PA|undefined
(1101 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 38 0.045
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.059
SB_25447| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.10
SB_50604| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.41
SB_11794| Best HMM Match : TNFR_c6 (HMM E-Value=1.4e-05) 34 0.55
SB_8401| Best HMM Match : ig (HMM E-Value=8.1e-22) 34 0.72
SB_40497| Best HMM Match : NDT80_PhoG (HMM E-Value=5.1) 33 0.96
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.1
SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 5.1
SB_4922| Best HMM Match : CXC (HMM E-Value=0.013) 31 6.8
SB_40091| Best HMM Match : CNH (HMM E-Value=8.5e-07) 30 8.9
SB_38431| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.9
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.9
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 37.9 bits (84), Expect = 0.045
Identities = 35/158 (22%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
Query: 648 DDNMLTLGRNKEIYMNPQEEFMDYDSLERSLVRRRRFSLACGTELFQNEMVTSGSKPVNY 707
+D LT R +M +E+ + D++ + R S A +EL N+ +K N
Sbjct: 492 EDKFLTKRRKSPGFMPMEEDILSTDAVGHGVNSSREQSSASDSELSLNDEPLMEAKDTNL 551
Query: 708 GR--LAKSWR--DVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPG-- 761
+ K ++ + A E E++ L ++ + +S+ +++ +SNP
Sbjct: 552 MNQSMQKMYKVSSSQHASEAEDESKPIFVIPLGDKRKDLSQTPLSSHNEPAIGSSNPALP 611
Query: 762 PLTIQVRGSPI-ETRRKIKDDFDPDTLDRKPKHEVKKR 798
P T +V I + + + + + +TL++KP VKK+
Sbjct: 612 PSTAEVTHQRILDQQDNVNERRNTETLEKKPSKSVKKK 649
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 37.5 bits (83), Expect = 0.059
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 702 SKPVNYGRLAKSWRDVKKAVEEENKLNAHVFGQLDNRSQ-SISEISVNTSEPMYDNTSNP 760
S PV R + WR + + E + +AH ++ + IS + + P + S
Sbjct: 192 SSPVTSRRRKRQWRSGESSTSSEREESAHRPVKIKRKKNLEISYKTTRSQSPENLDISRD 251
Query: 761 GPLTIQVRGSPIETR---RKIKDDFDPDT--LDRKPK---H---EVKKRVEKILLKSAGS 809
P T+ V +P+ ++K D D +T + RK K H E+ KR+ + SAGS
Sbjct: 252 SPKTVAVGHTPVRPSSECSRVKWDLDDNTPLITRKKKIVIHRSLEIDKRIPRTKRHSAGS 311
Query: 810 F 810
F
Sbjct: 312 F 312
>SB_25447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 752
Score = 36.7 bits (81), Expect = 0.10
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 874 SLKAPDLIRHIENQKERPPVPPKQRRGIDLSPKFSNMTRESPPG-ER-RRGTEEKDRFSQ 931
SL+ + +R + ER P++ + SP+ S R+SP G ER R+GT E DR +
Sbjct: 182 SLREAERVRESPRESERVRERPRESERVRESPRESERVRKSPRGYERARKGTRESDRVRE 241
Query: 932 YSRMEN 937
+ E+
Sbjct: 242 SPKGES 247
Score = 30.7 bits (66), Expect = 6.8
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 11/170 (6%)
Query: 768 RGSPIETRRKIKDDFDPDTLDRKPKHEVKKRVEKILLKSAGSFKCKSTPSENDTYKKSPQ 827
R SP E++R + + + + + PK EK+ S + + +P E++ +KSP+
Sbjct: 274 RESPRESKRVREGTREAERVRKSPKES-----EKVREGPTESERVRESPRESERVRKSPR 328
Query: 828 MAITQKIGNLRQIYXXXXXXXXXXVQFYNR-RGSVPCGGQDIQAFMRSLKAPDLIRHIEN 886
+ + G V+ R V G ++ + S + + +R +
Sbjct: 329 GSERARKGTRESDRVRESPKGYERVREGTRGYERVLEGTRESERVRESPRGYERVRKGKR 388
Query: 887 QKERPPVPPKQRRGIDLSPKFSNMTRESPPG-ER-RRGTEEKDRFSQYSR 934
+ ER PK G+ + S RESP G ER R G E +R + R
Sbjct: 389 ESERVRESPK---GVLEGTRESERVRESPRGSERVREGKRESERVREGKR 435
>SB_50604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 34.7 bits (76), Expect = 0.41
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 178 STRLAASCAAFRVAGASQNGLLDVRSIPFHAGEA-IPADSTPQSQGLSVLESLAIGVCVL 236
S ++A + A+ +G L + E IP+ Q+ GL E I CV
Sbjct: 459 SPNVSAFAIEKSIRQANSSGTLGFNVLDVRVAEKQIPSTKAAQNDGLKDWEIAVIVACV- 517
Query: 237 MLIFVYAAGIIFYIHYKQRQKKKQKDVEQNMSDN 270
++FV A II + Y +R KK+++ + DN
Sbjct: 518 -VVFVMAVVIIALLCYAKRLKKRKQKYDLWKDDN 550
>SB_11794| Best HMM Match : TNFR_c6 (HMM E-Value=1.4e-05)
Length = 331
Score = 34.3 bits (75), Expect = 0.55
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 207 HAGEAIPADSTPQSQGLSVLESLAIGVCVLMLIFVYAAGIIFYIHYKQRQKKKQKDVEQN 266
++ + +P+ P S LS LE + I V +++ I V+A ++ Y H RQ + D +N
Sbjct: 251 NSADLVPSGH-PSSPPLSCLEVILIVVVIVLAIVVFALIVVIY-HMCNRQPRANPDDTEN 308
Query: 267 MSDNGSAMEPRLDM 280
N S +D+
Sbjct: 309 FLINSSRESSSVDV 322
>SB_8401| Best HMM Match : ig (HMM E-Value=8.1e-22)
Length = 965
Score = 33.9 bits (74), Expect = 0.72
Identities = 16/53 (30%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 216 STPQSQGLSVLESLAIGVCVLMLIFVYAA-GIIFYIHYKQRQKKKQKDVEQNM 267
+TP++ + +S +G+ V++ I V G+I Y+ + +RQ+K QK+ ++M
Sbjct: 332 TTPKAVKIGGQDSAIVGLAVVVAILVLVIIGLIAYVMWLKRQEKSQKETGKHM 384
>SB_40497| Best HMM Match : NDT80_PhoG (HMM E-Value=5.1)
Length = 360
Score = 33.5 bits (73), Expect = 0.96
Identities = 47/180 (26%), Positives = 69/180 (38%), Gaps = 24/180 (13%)
Query: 16 SLIGTDCGPTRCM-EISHGTALAAMGGDSSSCMCRCRRQNPVFREDQRVCINQLDECLMA 74
S TD + C SH + MG S+ C R +FR C QL A
Sbjct: 63 SQFNTDSPMSNCKCRCSHAFSTFVMGATSTESRCYSNR---LFRTKNSSCTIQLQ----A 115
Query: 75 KFGRDGTKPLIPFVFLPLKGQIIYPSKEIIFTDVEDAICAVTSA-QYLTASGWVNLRDVI 133
+ D P++ K I PS + V+ C + QY W +R+
Sbjct: 116 EGSLDSKLPVVDLSSSDNKS-IKAPS----VSQVQYPRCEINGLPQYWDKGVWSQVRE-- 168
Query: 134 DNDVPFGLYRDEGST-FLQWRGSAALHARLEGRLVAVHVLCSGSSSTRLAASCAAFRVAG 192
FG Y T +L W+ S + GR+V V + C+G++ L ASC ++ G
Sbjct: 169 --RTLFGFYSPNYWTNWLTWQSSQFYN----GRIVRVPIRCNGTNDKTL-ASCIVLKIKG 221
>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 955
Score = 31.1 bits (67), Expect = 5.1
Identities = 11/33 (33%), Positives = 20/33 (60%)
Query: 873 RSLKAPDLIRHIENQKERPPVPPKQRRGIDLSP 905
R+ PD+ + + ++ PP+PP +R +DL P
Sbjct: 548 RAPPPPDMQTNPDTERRPPPLPPAPKRALDLKP 580
>SB_46132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 31.1 bits (67), Expect = 5.1
Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Query: 700 SGSKPVNYGRLAKSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSN 759
+G + G+L K R+ K ++++ D S ++ + +P Y++ +
Sbjct: 845 NGDFETSNGKLRKK-REKPKHNSPDSEVETSDSSSDDEVETSDRQLRRKSEKPKYNSPDS 903
Query: 760 PGPLTIQVRGSPIET------RRKIKDDFDPDTLDRKPKHEVKKR 798
G + ET +++ KD D LDR KH+ KKR
Sbjct: 904 EGETSYSSSDGEFETSDRELLKKREKDSSSDDELDRANKHQQKKR 948
>SB_4922| Best HMM Match : CXC (HMM E-Value=0.013)
Length = 600
Score = 30.7 bits (66), Expect = 6.8
Identities = 15/55 (27%), Positives = 31/55 (56%)
Query: 1000 IVRTVTKAPVTQVESDTDDLESLCDGRSESGGESVETDSVFFGNFDDSKEMLAEL 1054
++ ++ + V + +++ DDL+ LC+G + V SV N ++S E+L E+
Sbjct: 311 LICSIFRKFVYEFQTNPDDLKGLCEGYKQMACVEVPFSSVVGININNSHEVLIEV 365
>SB_40091| Best HMM Match : CNH (HMM E-Value=8.5e-07)
Length = 653
Score = 30.3 bits (65), Expect = 8.9
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 887 QKERPPVPPKQRRGIDLSPKFSNMTRESPP 916
++E PP+PPK ++ PK + TR +PP
Sbjct: 160 EEEPPPLPPKIKKDHYQVPKVQSSTRPTPP 189
>SB_38431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1042
Score = 30.3 bits (65), Expect = 8.9
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 737 NRSQSISEIS-VNTSEPMYDNT--SNPGPLTIQVRGSPIETRRKIKDDFDP 784
N + S+++ S +TS P ++NT SN P+ + + ++ +KD+ P
Sbjct: 624 NNTSSVNDNSRTSTSSPAHNNTKSSNTSPVVLDQQAGNVDLNNNVKDNIGP 674
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 30.3 bits (65), Expect = 8.9
Identities = 32/128 (25%), Positives = 60/128 (46%), Gaps = 10/128 (7%)
Query: 722 EEENKLNAHVFGQLDNRSQSISEISV---NTSEPMYDNTSNPGPLTIQVRGSPIETRRKI 778
+E + N + G+LD R Q IS + + +P NTS P P+ + S ++ +
Sbjct: 976 QEALRQNEELAGELDKREQEISTLIMEIEREKKPAEANTS-PKPVLVSELWSSVQEATQT 1034
Query: 779 KDDFDPDTLDRKPKHEVKKRVEKILLKSAGSFKCKSTPSEN---DTYKK--SPQMAITQK 833
K++ + + + VK+R E + LK+A + + K ++ D YK + I QK
Sbjct: 1035 KEEKEQTHKALEQELIVKQR-EILNLKTALAKQQKENEEQSKIADNYKAELAHMKEIKQK 1093
Query: 834 IGNLRQIY 841
+ Q++
Sbjct: 1094 ADSAPQVF 1101
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.131 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,245,647
Number of Sequences: 59808
Number of extensions: 1338408
Number of successful extensions: 3320
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3294
Number of HSP's gapped (non-prelim): 38
length of query: 1101
length of database: 16,821,457
effective HSP length: 90
effective length of query: 1011
effective length of database: 11,438,737
effective search space: 11564563107
effective search space used: 11564563107
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)
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