GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001899-TA|BGIBMGA001899-PA|undefined
         (1101 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    29   0.51 
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    26   4.7  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            26   4.7  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 29.5 bits (63), Expect = 0.51
 Identities = 15/32 (46%), Positives = 19/32 (59%)

Query: 1002 RTVTKAPVTQVESDTDDLESLCDGRSESGGES 1033
            R ++KA V+  ESD+DD         ESGGES
Sbjct: 1009 RILSKATVSTSESDSDDSRLKIASGDESGGES 1040


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 882 RHIENQKE--RPPVPPKQRRGIDLSPKFSNMTRESPPGERRRGTEEK 926
           +H + Q+E  RP  PP  RR   L   FS  T  +P  E     E++
Sbjct: 211 QHSDQQQELPRPSSPPAIRRSGTLEVTFSERTFVTPKRESMEQAEQE 257


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 26.2 bits (55), Expect = 4.7
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 882 RHIENQKE--RPPVPPKQRRGIDLSPKFSNMTRESPPGERRRGTEEK 926
           +H + Q+E  RP  PP  RR   L   FS  T  +P  E     E++
Sbjct: 211 QHSDQQQEPPRPSSPPAIRRSGTLEVTFSERTFVTPKRESMEQAEQE 257


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.131    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 991,347
Number of Sequences: 2123
Number of extensions: 37608
Number of successful extensions: 113
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 112
Number of HSP's gapped (non-prelim): 3
length of query: 1101
length of database: 516,269
effective HSP length: 71
effective length of query: 1030
effective length of database: 365,536
effective search space: 376502080
effective search space used: 376502080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)