GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001899-TA|BGIBMGA001899-PA|undefined
         (1101 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC101073-1|AAI01074.1|  841|Homo sapiens SLIT and NTRK-like fami...    33   7.4  
BC101072-1|AAI01073.1|  841|Homo sapiens SLIT and NTRK-like fami...    33   7.4  
BC101071-1|AAI01072.1|  841|Homo sapiens SLIT and NTRK-like fami...    33   7.4  
BC101070-1|AAI01071.1|  841|Homo sapiens SLIT and NTRK-like fami...    33   7.4  
U03109-1|AAA82108.1|  757|Homo sapiens aspartyl beta-hydroxylase...    32   9.8  
S83325-1|AAB50779.1|  758|Homo sapiens aspartyl(asparaginyl)beta...    32   9.8  

>BC101073-1|AAI01074.1|  841|Homo sapiens SLIT and NTRK-like family,
           member 6 protein.
          Length = 841

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 226 LESLAIGVCVLMLIFVY-AAGIIFYIHYKQRQKKKQKDVEQNMSDN 270
           L  L +G+ ++ +  V+ AAGI+  + +++R+ KK K V++ M DN
Sbjct: 607 LSVLILGLLIMFITIVFCAAGIVVLVLHRRRRYKK-KQVDEQMRDN 651


>BC101072-1|AAI01073.1|  841|Homo sapiens SLIT and NTRK-like family,
           member 6 protein.
          Length = 841

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 226 LESLAIGVCVLMLIFVY-AAGIIFYIHYKQRQKKKQKDVEQNMSDN 270
           L  L +G+ ++ +  V+ AAGI+  + +++R+ KK K V++ M DN
Sbjct: 607 LSVLILGLLIMFITIVFCAAGIVVLVLHRRRRYKK-KQVDEQMRDN 651


>BC101071-1|AAI01072.1|  841|Homo sapiens SLIT and NTRK-like family,
           member 6 protein.
          Length = 841

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 226 LESLAIGVCVLMLIFVY-AAGIIFYIHYKQRQKKKQKDVEQNMSDN 270
           L  L +G+ ++ +  V+ AAGI+  + +++R+ KK K V++ M DN
Sbjct: 607 LSVLILGLLIMFITIVFCAAGIVVLVLHRRRRYKK-KQVDEQMRDN 651


>BC101070-1|AAI01071.1|  841|Homo sapiens SLIT and NTRK-like family,
           member 6 protein.
          Length = 841

 Score = 32.7 bits (71), Expect = 7.4
 Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 2/46 (4%)

Query: 226 LESLAIGVCVLMLIFVY-AAGIIFYIHYKQRQKKKQKDVEQNMSDN 270
           L  L +G+ ++ +  V+ AAGI+  + +++R+ KK K V++ M DN
Sbjct: 607 LSVLILGLLIMFITIVFCAAGIVVLVLHRRRRYKK-KQVDEQMRDN 651


>U03109-1|AAA82108.1|  757|Homo sapiens aspartyl beta-hydroxylase
           protein.
          Length = 757

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 10/130 (7%)

Query: 691 ELFQNEMVTSGSKPV-NYGRLAKSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNT 749
           E+   +     S+PV    RL     DV   V EE      V+  L+N    I+E++   
Sbjct: 228 EMMSEQENPDSSEPVVEDERLHHDTDDVTYQVYEEQA----VYEPLENEGIEITEVTA-- 281

Query: 750 SEPMYDNTSNPGPLTIQ-VRGSPIETRRKIKDDFDPDTLDRKPKHEVKKRVEKILLKSAG 808
             P  DN      + ++ V   P+E ++++  + +  T D + K +VKK+  K+L K   
Sbjct: 282 --PPEDNPVEDSQVIVEEVSIFPVEEQQEVPPETNRKTDDPEQKAKVKKKKPKLLNKFDK 339

Query: 809 SFKCKSTPSE 818
           + K +   +E
Sbjct: 340 TIKAELDAAE 349


>S83325-1|AAB50779.1|  758|Homo sapiens
           aspartyl(asparaginyl)beta-hydroxylase protein.
          Length = 758

 Score = 32.3 bits (70), Expect = 9.8
 Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 10/130 (7%)

Query: 691 ELFQNEMVTSGSKPV-NYGRLAKSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNT 749
           E+   +     S+PV    RL     DV   V EE      V+  L+N    I+E++   
Sbjct: 228 EMMSEQENPDSSEPVVEDERLHHDTDDVTYQVYEEQA----VYEPLENEGIEITEVTA-- 281

Query: 750 SEPMYDNTSNPGPLTIQ-VRGSPIETRRKIKDDFDPDTLDRKPKHEVKKRVEKILLKSAG 808
             P  DN      + ++ V   P+E ++++  + +  T D + K +VKK+  K+L K   
Sbjct: 282 --PPEDNPVEDSQVIVEEVSIFPVEEQQEVPPETNRKTDDPEQKAKVKKKKPKLLNKFDK 339

Query: 809 SFKCKSTPSE 818
           + K +   +E
Sbjct: 340 TIKAELDAAE 349


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.315    0.131    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,185,140
Number of Sequences: 224733
Number of extensions: 5629386
Number of successful extensions: 17391
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 17383
Number of HSP's gapped (non-prelim): 6
length of query: 1101
length of database: 73,234,838
effective HSP length: 98
effective length of query: 1003
effective length of database: 51,211,004
effective search space: 51364637012
effective search space used: 51364637012
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 70 (32.3 bits)