GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001899-TA|BGIBMGA001899-PA|undefined
         (1101 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1271|AAF58666.2| 1626|Drosophila melanogaster CG13209-P...   181   6e-45
AE013599-3384|AAF46837.1|  775|Drosophila melanogaster CG10955-P...    35   0.72 
AY052038-1|AAK93462.1|  612|Drosophila melanogaster LP04345p pro...    31   6.7  
AE014297-1563|AAF54845.1|  612|Drosophila melanogaster CG6234-PA...    31   6.7  
AE014298-1447|AAN09260.1| 1506|Drosophila melanogaster CG32681-P...    31   8.9  

>AE013599-1271|AAF58666.2| 1626|Drosophila melanogaster CG13209-PA
           protein.
          Length = 1626

 Score =  181 bits (440), Expect = 6e-45
 Identities = 99/301 (32%), Positives = 156/301 (51%), Gaps = 21/301 (6%)

Query: 25  TRCMEISHGTALAAM--GGDSSSCMCRCRRQNPVFREDQRVCINQLDECLMAKFGRDGTK 82
           TR +++  G    A       + C CRC      +RED  +C++ + EC ++ F    + 
Sbjct: 132 TRRLKLQKGRGQVANIDASGETGCTCRCLPYQRAYREDLGICVDDIHECSLSPFVSGSSS 191

Query: 83  PLIPFVFLPLKGQIIYPSKEIIFTDVEDAICAVTSAQYLTASGWVNLRDVIDNDVPFGLY 142
             IPFVFLPLKGQIIYPS+EI F  +   +CAVT AQYL ++GW +LR+ ID D PF ++
Sbjct: 192 EKIPFVFLPLKGQIIYPSREISFASIHTPVCAVTGAQYLGSNGWSDLRNPIDTDYPFRMF 251

Query: 143 RDEGSTFLQWRGSAALHARLEGRLVAVHVLC-------SGSSSTR---------LAASCA 186
           RDEG +FL W G A L  +++GRL+ VH++C       + S+  +         + + C 
Sbjct: 252 RDEGRSFLLWLGEADLRQKMQGRLIVVHLVCRDMTVALNASNHVKGEPLMPPRNVHSPCV 311

Query: 187 AFRVAGASQNGLLDVRSIPFHAGEAIPADSTPQSQGLSVLESLAIGVCVLMLIFVYAAGI 246
           AFRV G+      +V  + F    +    ST  S G+++ E + IG+C L+L  +Y A +
Sbjct: 312 AFRVNGSPVKYAHNVPEVFFQPANSTTLAST--SDGMTMREYVVIGICSLLLGLIYVASV 369

Query: 247 IFYIHYKQRQKKKQKDVEQNM-SDNGSAMEPRLDMSNVMMKTNPLLKLNGMGNDFFNSEN 305
             Y++ K+R++   +    N+ +D       ++       +   +   N MG    N  N
Sbjct: 370 FLYLYMKKRKRHSSRHSLDNLTNDINYPKNDQVTYGAPFSRVGSIYSSNSMGLGNGNESN 429

Query: 306 T 306
           T
Sbjct: 430 T 430



 Score = 50.0 bits (114), Expect = 2e-05
 Identities = 24/35 (68%), Positives = 29/35 (82%)

Query: 332 AAIDFLEKIREVMTIAKDKMTSKRFVPMLSEIPEE 366
           AAI+FL+KIREV+ IAK KM SKR+ P L+ IPEE
Sbjct: 569 AAIEFLQKIREVIAIAKYKMASKRYQPSLNIIPEE 603



 Score = 37.1 bits (82), Expect = 0.14
 Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 2/42 (4%)

Query: 754  YDNTSNPGPLTIQVRGSP-IETRRKIKDDFDPDTLDRKPKHE 794
            YD T   G +TI+V   P  +  R   D F+PDTLDRKPK +
Sbjct: 989  YD-TPFRGSMTIEVEHEPPSDLERTDSDQFEPDTLDRKPKKQ 1029


>AE013599-3384|AAF46837.1|  775|Drosophila melanogaster CG10955-PA
           protein.
          Length = 775

 Score = 34.7 bits (76), Expect = 0.72
 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 1/78 (1%)

Query: 193 ASQNGLLDVRSIPFHAGEAIPADSTPQSQGLSVLESLAIGVCVLMLIFVYAAGIIFYIHY 252
           AS + LLDV   P +   +    STP     +   S A+   ++      +AG+  Y  +
Sbjct: 251 ASTSTLLDVEPKPSNEVRSASPLSTPALNRDAASTSAAVA-SIMPDDAASSAGVSDYFDH 309

Query: 253 KQRQKKKQKDVEQNMSDN 270
           K+R K+++K+VE N +D+
Sbjct: 310 KERSKERKKNVEANKTDD 327


>AY052038-1|AAK93462.1|  612|Drosophila melanogaster LP04345p
           protein.
          Length = 612

 Score = 31.5 bits (68), Expect = 6.7
 Identities = 21/71 (29%), Positives = 31/71 (43%)

Query: 155 SAALHARLEGRLVAVHVLCSGSSSTRLAASCAAFRVAGASQNGLLDVRSIPFHAGEAIPA 214
           SA L      R   +  LCSG++   + AS   F V+   Q+G LD+       G+ I  
Sbjct: 523 SAQLSGATNYRSTLIIALCSGTAVIFIVASLVIFVVSFQRQHGTLDIEMQEQRLGKDIQE 582

Query: 215 DSTPQSQGLSV 225
           +   Q + L V
Sbjct: 583 EDNVQMKLLDV 593


>AE014297-1563|AAF54845.1|  612|Drosophila melanogaster CG6234-PA
           protein.
          Length = 612

 Score = 31.5 bits (68), Expect = 6.7
 Identities = 21/71 (29%), Positives = 31/71 (43%)

Query: 155 SAALHARLEGRLVAVHVLCSGSSSTRLAASCAAFRVAGASQNGLLDVRSIPFHAGEAIPA 214
           SA L      R   +  LCSG++   + AS   F V+   Q+G LD+       G+ I  
Sbjct: 523 SAQLSGATNYRSTLIIALCSGTAVIFIVASLVIFVVSFQRQHGTLDIEMQEQRLGKDIQE 582

Query: 215 DSTPQSQGLSV 225
           +   Q + L V
Sbjct: 583 EDNVQMKLLDV 593


>AE014298-1447|AAN09260.1| 1506|Drosophila melanogaster CG32681-PA
            protein.
          Length = 1506

 Score = 31.1 bits (67), Expect = 8.9
 Identities = 10/33 (30%), Positives = 20/33 (60%)

Query: 884  IENQKERPPVPPKQRRGIDLSPKFSNMTRESPP 916
            +  Q+ RPP PP + + + + P+++    E+PP
Sbjct: 1174 LRTQRPRPPPPPLKHQNLAMCPEYTQYHLENPP 1206


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.315    0.131    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,184,520
Number of Sequences: 52641
Number of extensions: 2023959
Number of successful extensions: 6526
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6514
Number of HSP's gapped (non-prelim): 12
length of query: 1101
length of database: 24,830,863
effective HSP length: 93
effective length of query: 1008
effective length of database: 19,935,250
effective search space: 20094732000
effective search space used: 20094732000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 67 (31.1 bits)