BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001899-TA|BGIBMGA001899-PA|undefined (1101 letters) Database: celegans 27,539 sequences; 12,573,161 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 36 0.21 AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 36 0.21 Z92784-5|CAB07196.3| 554|Caenorhabditis elegans Hypothetical pr... 34 0.49 AY255668-1|AAQ96605.1| 167|Caenorhabditis elegans MiRP5 protein. 33 1.1 AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 33 1.1 AF098994-1|AAC67472.2| 167|Caenorhabditis elegans Hypothetical ... 33 1.1 U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical pr... 30 7.9 U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical pr... 30 7.9 U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channe... 30 7.9 U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel... 30 7.9 U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel... 30 7.9 U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel... 30 7.9 U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel... 30 7.9 AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltag... 30 7.9 AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calciu... 30 7.9 AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calciu... 30 7.9 AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calciu... 30 7.9 AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-depen... 30 7.9 >AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein protein. Length = 18519 Score = 35.5 bits (78), Expect = 0.21 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%) Query: 718 KKAVEEENKLNAH---VFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSPIET 774 +K ++E+NKL A+ G+L +S ++ S T E + T + + + Sbjct: 13341 QKELDEKNKLEANKKSAAGKLKIEEESAAK-SKQTVEEQAKLDAQTKAKTAEKQTKLEKD 13399 Query: 775 RRKIKDDFDPDTLDRKPKHEV-KKRVEKILLKSAGSFKCKSTPSENDTYKKSPQMAITQK 833 + K+ +T+D KPK +V KK+ E KS S KS S+ P + TQK Sbjct: 13400 EKSTKESESKETVDEKPKKKVLKKKTE----KSDSSISQKSETSKTVVESAGPSESETQK 13455 Query: 834 IGN 836 + + Sbjct: 13456 VAD 13458 Score = 33.1 bits (72), Expect = 1.1 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%) Query: 718 KKAVEEENKLNAH---VFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSPIET 774 +K ++E+NKL A+ +L +S ++ S T E + T + + + Sbjct: 9708 QKELDEKNKLEANKKSAAEKLKLEEESAAK-SKQTVEEQAKLDAQTKEKTAEKQTGLEKD 9766 Query: 775 RRKIKDDFDPDTLDRKPKHEV-KKRVEKILLKSAGSFKCKSTPSENDTYKKSPQMAITQK 833 + KD +T+D KPK +V KK+ E KS S KS S+ P + TQK Sbjct: 9767 DKSTKDSESKETVDEKPKKKVLKKKTE----KSDSSISQKSVTSKTVVESGGPSESETQK 9822 Query: 834 IGN 836 + + Sbjct: 9823 VAD 9825 >AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein protein. Length = 18534 Score = 35.5 bits (78), Expect = 0.21 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%) Query: 718 KKAVEEENKLNAH---VFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSPIET 774 +K ++E+NKL A+ G+L +S ++ S T E + T + + + Sbjct: 13341 QKELDEKNKLEANKKSAAGKLKIEEESAAK-SKQTVEEQAKLDAQTKAKTAEKQTKLEKD 13399 Query: 775 RRKIKDDFDPDTLDRKPKHEV-KKRVEKILLKSAGSFKCKSTPSENDTYKKSPQMAITQK 833 + K+ +T+D KPK +V KK+ E KS S KS S+ P + TQK Sbjct: 13400 EKSTKESESKETVDEKPKKKVLKKKTE----KSDSSISQKSETSKTVVESAGPSESETQK 13455 Query: 834 IGN 836 + + Sbjct: 13456 VAD 13458 Score = 33.1 bits (72), Expect = 1.1 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%) Query: 718 KKAVEEENKLNAH---VFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSPIET 774 +K ++E+NKL A+ +L +S ++ S T E + T + + + Sbjct: 9708 QKELDEKNKLEANKKSAAEKLKLEEESAAK-SKQTVEEQAKLDAQTKEKTAEKQTGLEKD 9766 Query: 775 RRKIKDDFDPDTLDRKPKHEV-KKRVEKILLKSAGSFKCKSTPSENDTYKKSPQMAITQK 833 + KD +T+D KPK +V KK+ E KS S KS S+ P + TQK Sbjct: 9767 DKSTKDSESKETVDEKPKKKVLKKKTE----KSDSSISQKSVTSKTVVESGGPSESETQK 9822 Query: 834 IGN 836 + + Sbjct: 9823 VAD 9825 >Z92784-5|CAB07196.3| 554|Caenorhabditis elegans Hypothetical protein F31C3.6a protein. Length = 554 Score = 34.3 bits (75), Expect = 0.49 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%) Query: 333 AIDFLEKIREVMTIAKDKMTSKRFVPMLSEIPEEDLYHTID 373 AI FL +R V+ +AK+++ +RF+P L I ED+ + ID Sbjct: 355 AIQFLYDLRRVVDVAKERIRQRRFIPALPVI-IEDVENEID 394 >AY255668-1|AAQ96605.1| 167|Caenorhabditis elegans MiRP5 protein. Length = 167 Score = 33.1 bits (72), Expect = 1.1 Identities = 15/78 (19%), Positives = 37/78 (47%) Query: 213 PADSTPQSQGLSVLESLAIGVCVLMLIFVYAAGIIFYIHYKQRQKKKQKDVEQNMSDNGS 272 P + + V+ + IG+ ++ I AA I+ YI K++QK+ +K +++ Sbjct: 11 PTSGSSSTPWTKVVIFIIIGILIVAFIVFAAASIVKYIKSKKQQKQPKKKTKKSTKSRSK 70 Query: 273 AMEPRLDMSNVMMKTNPL 290 +++ + + +P+ Sbjct: 71 SLKSKQSAVTPKKRASPI 88 >AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein protein. Length = 10578 Score = 33.1 bits (72), Expect = 1.1 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%) Query: 718 KKAVEEENKLNAH---VFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSPIET 774 +K ++E+NKL A+ +L +S ++ S T E + T + + + Sbjct: 9688 QKELDEKNKLEANKKSAAEKLKLEEESAAK-SKQTVEEQAKLDAQTKEKTAEKQTGLEKD 9746 Query: 775 RRKIKDDFDPDTLDRKPKHEV-KKRVEKILLKSAGSFKCKSTPSENDTYKKSPQMAITQK 833 + KD +T+D KPK +V KK+ E KS S KS S+ P + TQK Sbjct: 9747 DKSTKDSESKETVDEKPKKKVLKKKTE----KSDSSISQKSVTSKTVVESGGPSESETQK 9802 Query: 834 IGN 836 + + Sbjct: 9803 VAD 9805 >AF098994-1|AAC67472.2| 167|Caenorhabditis elegans Hypothetical protein T06A4.2 protein. Length = 167 Score = 33.1 bits (72), Expect = 1.1 Identities = 15/78 (19%), Positives = 37/78 (47%) Query: 213 PADSTPQSQGLSVLESLAIGVCVLMLIFVYAAGIIFYIHYKQRQKKKQKDVEQNMSDNGS 272 P + + V+ + IG+ ++ I AA I+ YI K++QK+ +K +++ Sbjct: 11 PTSGSSSTPWTKVVIFIIIGILIVAFIVFAAASIVKYIKSKKQQKQPKKKTKKSTKSRSK 70 Query: 273 AMEPRLDMSNVMMKTNPL 290 +++ + + +P+ Sbjct: 71 SLKSKQSAVTPKKRASPI 88 >U61955-7|AAV58862.1| 456|Caenorhabditis elegans Hypothetical protein M03D4.4b protein. Length = 456 Score = 30.3 bits (65), Expect = 7.9 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 7/75 (9%) Query: 373 DLGWDIPCARRGRRFSAISLKQENSRKAMHCGGCPGCDNNIRPQKAVALTRSNSCKSCVS 432 DL D CA ++ S + L + + + P + PQ + + ++SCK C + Sbjct: 337 DLATDTSCASSPQKTSPLQLLESSCLEQSSVS--PSSSSGASPQPTASESSTSSCKDCTN 394 Query: 433 D-----DYKQRIVKK 442 D +Q++VKK Sbjct: 395 SWQRVHDLEQQMVKK 409 >U61955-6|AAC24408.2| 505|Caenorhabditis elegans Hypothetical protein M03D4.4a protein. Length = 505 Score = 30.3 bits (65), Expect = 7.9 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 7/75 (9%) Query: 373 DLGWDIPCARRGRRFSAISLKQENSRKAMHCGGCPGCDNNIRPQKAVALTRSNSCKSCVS 432 DL D CA ++ S + L + + + P + PQ + + ++SCK C + Sbjct: 386 DLATDTSCASSPQKTSPLQLLESSCLEQSSVS--PSSSSGASPQPTASESSTSSCKDCTN 443 Query: 433 D-----DYKQRIVKK 442 D +Q++VKK Sbjct: 444 SWQRVHDLEQQMVKK 458 >U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channel, alpha subunitprotein 1, isoform f protein. Length = 1418 Score = 30.3 bits (65), Expect = 7.9 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 712 KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771 +S + K+ +EE+ + A + D R + + I T+ P ++N P T Q SP Sbjct: 884 ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 941 Query: 772 IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828 E + R + ++ P +RK + ++K ++L+++ F D + + Sbjct: 942 EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1000 Query: 829 AITQKIGN 836 ++ + N Sbjct: 1001 SLVLPVAN 1008 >U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel, alpha subunitprotein 1, isoform c protein. Length = 1852 Score = 30.3 bits (65), Expect = 7.9 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 712 KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771 +S + K+ +EE+ + A + D R + + I T+ P ++N P T Q SP Sbjct: 884 ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 941 Query: 772 IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828 E + R + ++ P +RK + ++K ++L+++ F D + + Sbjct: 942 EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1000 Query: 829 AITQKIGN 836 ++ + N Sbjct: 1001 SLVLPVAN 1008 >U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel, alpha subunitprotein 1, isoform a protein. Length = 1837 Score = 30.3 bits (65), Expect = 7.9 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 712 KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771 +S + K+ +EE+ + A + D R + + I T+ P ++N P T Q SP Sbjct: 884 ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 941 Query: 772 IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828 E + R + ++ P +RK + ++K ++L+++ F D + + Sbjct: 942 EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1000 Query: 829 AITQKIGN 836 ++ + N Sbjct: 1001 SLVLPVAN 1008 >U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel, alpha subunitprotein 1, isoform d protein. Length = 1885 Score = 30.3 bits (65), Expect = 7.9 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 712 KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771 +S + K+ +EE+ + A + D R + + I T+ P ++N P T Q SP Sbjct: 932 ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 989 Query: 772 IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828 E + R + ++ P +RK + ++K ++L+++ F D + + Sbjct: 990 EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1048 Query: 829 AITQKIGN 836 ++ + N Sbjct: 1049 SLVLPVAN 1056 >U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel, alpha subunitprotein 1, isoform e protein. Length = 1844 Score = 30.3 bits (65), Expect = 7.9 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 712 KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771 +S + K+ +EE+ + A + D R + + I T+ P ++N P T Q SP Sbjct: 891 ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 948 Query: 772 IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828 E + R + ++ P +RK + ++K ++L+++ F D + + Sbjct: 949 EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1007 Query: 829 AITQKIGN 836 ++ + N Sbjct: 1008 SLVLPVAN 1015 >AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltage sensitive calciumchannel alpha1 subunit isoform D protein. Length = 1844 Score = 30.3 bits (65), Expect = 7.9 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 712 KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771 +S + K+ +EE+ + A + D R + + I T+ P ++N P T Q SP Sbjct: 891 ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 948 Query: 772 IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828 E + R + ++ P +RK + ++K ++L+++ F D + + Sbjct: 949 EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1007 Query: 829 AITQKIGN 836 ++ + N Sbjct: 1008 SLVLPVAN 1015 >AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calcium channel alpha1 subunitisoform C protein. Length = 1852 Score = 30.3 bits (65), Expect = 7.9 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 712 KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771 +S + K+ +EE+ + A + D R + + I T+ P ++N P T Q SP Sbjct: 884 ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 941 Query: 772 IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828 E + R + ++ P +RK + ++K ++L+++ F D + + Sbjct: 942 EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1000 Query: 829 AITQKIGN 836 ++ + N Sbjct: 1001 SLVLPVAN 1008 >AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calcium channel alpha1 subunitisoform B protein. Length = 1885 Score = 30.3 bits (65), Expect = 7.9 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 712 KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771 +S + K+ +EE+ + A + D R + + I T+ P ++N P T Q SP Sbjct: 932 ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 989 Query: 772 IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828 E + R + ++ P +RK + ++K ++L+++ F D + + Sbjct: 990 EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1048 Query: 829 AITQKIGN 836 ++ + N Sbjct: 1049 SLVLPVAN 1056 >AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calcium channel alpha1 subunitisoform A protein. Length = 1837 Score = 30.3 bits (65), Expect = 7.9 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 712 KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771 +S + K+ +EE+ + A + D R + + I T+ P ++N P T Q SP Sbjct: 884 ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 941 Query: 772 IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828 E + R + ++ P +RK + ++K ++L+++ F D + + Sbjct: 942 EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1000 Query: 829 AITQKIGN 836 ++ + N Sbjct: 1001 SLVLPVAN 1008 >AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-dependent calcium channelalpha13 subunit protein. Length = 1837 Score = 30.3 bits (65), Expect = 7.9 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%) Query: 712 KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771 +S + K+ +EE+ + A + D R + + I T+ P ++N P T Q SP Sbjct: 884 ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 941 Query: 772 IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828 E + R + ++ P +RK + ++K ++L+++ F D + + Sbjct: 942 EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1000 Query: 829 AITQKIGN 836 ++ + N Sbjct: 1001 SLVLPVAN 1008 Database: celegans Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 12,573,161 Number of sequences in database: 27,539 Lambda K H 0.315 0.131 0.380 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,721,970 Number of Sequences: 27539 Number of extensions: 1008446 Number of successful extensions: 2914 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 15 Number of HSP's that attempted gapping in prelim test: 2874 Number of HSP's gapped (non-prelim): 58 length of query: 1101 length of database: 12,573,161 effective HSP length: 89 effective length of query: 1012 effective length of database: 10,122,190 effective search space: 10243656280 effective search space used: 10243656280 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 65 (30.3 bits)
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