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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001899-TA|BGIBMGA001899-PA|undefined
         (1101 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    36   0.21 
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    36   0.21 
Z92784-5|CAB07196.3|  554|Caenorhabditis elegans Hypothetical pr...    34   0.49 
AY255668-1|AAQ96605.1|  167|Caenorhabditis elegans MiRP5 protein.      33   1.1  
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    33   1.1  
AF098994-1|AAC67472.2|  167|Caenorhabditis elegans Hypothetical ...    33   1.1  
U61955-7|AAV58862.1|  456|Caenorhabditis elegans Hypothetical pr...    30   7.9  
U61955-6|AAC24408.2|  505|Caenorhabditis elegans Hypothetical pr...    30   7.9  
U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channe...    30   7.9  
U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel...    30   7.9  
U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel...    30   7.9  
U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel...    30   7.9  
U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel...    30   7.9  
AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltag...    30   7.9  
AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calciu...    30   7.9  
AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calciu...    30   7.9  
AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calciu...    30   7.9  
AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-depen...    30   7.9  

>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 35.5 bits (78), Expect = 0.21
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)

Query: 718   KKAVEEENKLNAH---VFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSPIET 774
             +K ++E+NKL A+     G+L    +S ++ S  T E      +     T + +    + 
Sbjct: 13341 QKELDEKNKLEANKKSAAGKLKIEEESAAK-SKQTVEEQAKLDAQTKAKTAEKQTKLEKD 13399

Query: 775   RRKIKDDFDPDTLDRKPKHEV-KKRVEKILLKSAGSFKCKSTPSENDTYKKSPQMAITQK 833
              +  K+    +T+D KPK +V KK+ E    KS  S   KS  S+       P  + TQK
Sbjct: 13400 EKSTKESESKETVDEKPKKKVLKKKTE----KSDSSISQKSETSKTVVESAGPSESETQK 13455

Query: 834   IGN 836
             + +
Sbjct: 13456 VAD 13458



 Score = 33.1 bits (72), Expect = 1.1
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)

Query: 718  KKAVEEENKLNAH---VFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSPIET 774
            +K ++E+NKL A+      +L    +S ++ S  T E      +     T + +    + 
Sbjct: 9708 QKELDEKNKLEANKKSAAEKLKLEEESAAK-SKQTVEEQAKLDAQTKEKTAEKQTGLEKD 9766

Query: 775  RRKIKDDFDPDTLDRKPKHEV-KKRVEKILLKSAGSFKCKSTPSENDTYKKSPQMAITQK 833
             +  KD    +T+D KPK +V KK+ E    KS  S   KS  S+       P  + TQK
Sbjct: 9767 DKSTKDSESKETVDEKPKKKVLKKKTE----KSDSSISQKSVTSKTVVESGGPSESETQK 9822

Query: 834  IGN 836
            + +
Sbjct: 9823 VAD 9825


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 35.5 bits (78), Expect = 0.21
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)

Query: 718   KKAVEEENKLNAH---VFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSPIET 774
             +K ++E+NKL A+     G+L    +S ++ S  T E      +     T + +    + 
Sbjct: 13341 QKELDEKNKLEANKKSAAGKLKIEEESAAK-SKQTVEEQAKLDAQTKAKTAEKQTKLEKD 13399

Query: 775   RRKIKDDFDPDTLDRKPKHEV-KKRVEKILLKSAGSFKCKSTPSENDTYKKSPQMAITQK 833
              +  K+    +T+D KPK +V KK+ E    KS  S   KS  S+       P  + TQK
Sbjct: 13400 EKSTKESESKETVDEKPKKKVLKKKTE----KSDSSISQKSETSKTVVESAGPSESETQK 13455

Query: 834   IGN 836
             + +
Sbjct: 13456 VAD 13458



 Score = 33.1 bits (72), Expect = 1.1
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)

Query: 718  KKAVEEENKLNAH---VFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSPIET 774
            +K ++E+NKL A+      +L    +S ++ S  T E      +     T + +    + 
Sbjct: 9708 QKELDEKNKLEANKKSAAEKLKLEEESAAK-SKQTVEEQAKLDAQTKEKTAEKQTGLEKD 9766

Query: 775  RRKIKDDFDPDTLDRKPKHEV-KKRVEKILLKSAGSFKCKSTPSENDTYKKSPQMAITQK 833
             +  KD    +T+D KPK +V KK+ E    KS  S   KS  S+       P  + TQK
Sbjct: 9767 DKSTKDSESKETVDEKPKKKVLKKKTE----KSDSSISQKSVTSKTVVESGGPSESETQK 9822

Query: 834  IGN 836
            + +
Sbjct: 9823 VAD 9825


>Z92784-5|CAB07196.3|  554|Caenorhabditis elegans Hypothetical
           protein F31C3.6a protein.
          Length = 554

 Score = 34.3 bits (75), Expect = 0.49
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 1/41 (2%)

Query: 333 AIDFLEKIREVMTIAKDKMTSKRFVPMLSEIPEEDLYHTID 373
           AI FL  +R V+ +AK+++  +RF+P L  I  ED+ + ID
Sbjct: 355 AIQFLYDLRRVVDVAKERIRQRRFIPALPVI-IEDVENEID 394


>AY255668-1|AAQ96605.1|  167|Caenorhabditis elegans MiRP5 protein.
          Length = 167

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 15/78 (19%), Positives = 37/78 (47%)

Query: 213 PADSTPQSQGLSVLESLAIGVCVLMLIFVYAAGIIFYIHYKQRQKKKQKDVEQNMSDNGS 272
           P   +  +    V+  + IG+ ++  I   AA I+ YI  K++QK+ +K  +++      
Sbjct: 11  PTSGSSSTPWTKVVIFIIIGILIVAFIVFAAASIVKYIKSKKQQKQPKKKTKKSTKSRSK 70

Query: 273 AMEPRLDMSNVMMKTNPL 290
           +++ +        + +P+
Sbjct: 71  SLKSKQSAVTPKKRASPI 88


>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
            protein.
          Length = 10578

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)

Query: 718  KKAVEEENKLNAH---VFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSPIET 774
            +K ++E+NKL A+      +L    +S ++ S  T E      +     T + +    + 
Sbjct: 9688 QKELDEKNKLEANKKSAAEKLKLEEESAAK-SKQTVEEQAKLDAQTKEKTAEKQTGLEKD 9746

Query: 775  RRKIKDDFDPDTLDRKPKHEV-KKRVEKILLKSAGSFKCKSTPSENDTYKKSPQMAITQK 833
             +  KD    +T+D KPK +V KK+ E    KS  S   KS  S+       P  + TQK
Sbjct: 9747 DKSTKDSESKETVDEKPKKKVLKKKTE----KSDSSISQKSVTSKTVVESGGPSESETQK 9802

Query: 834  IGN 836
            + +
Sbjct: 9803 VAD 9805


>AF098994-1|AAC67472.2|  167|Caenorhabditis elegans Hypothetical
           protein T06A4.2 protein.
          Length = 167

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 15/78 (19%), Positives = 37/78 (47%)

Query: 213 PADSTPQSQGLSVLESLAIGVCVLMLIFVYAAGIIFYIHYKQRQKKKQKDVEQNMSDNGS 272
           P   +  +    V+  + IG+ ++  I   AA I+ YI  K++QK+ +K  +++      
Sbjct: 11  PTSGSSSTPWTKVVIFIIIGILIVAFIVFAAASIVKYIKSKKQQKQPKKKTKKSTKSRSK 70

Query: 273 AMEPRLDMSNVMMKTNPL 290
           +++ +        + +P+
Sbjct: 71  SLKSKQSAVTPKKRASPI 88


>U61955-7|AAV58862.1|  456|Caenorhabditis elegans Hypothetical
           protein M03D4.4b protein.
          Length = 456

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 7/75 (9%)

Query: 373 DLGWDIPCARRGRRFSAISLKQENSRKAMHCGGCPGCDNNIRPQKAVALTRSNSCKSCVS 432
           DL  D  CA   ++ S + L + +  +       P   +   PQ   + + ++SCK C +
Sbjct: 337 DLATDTSCASSPQKTSPLQLLESSCLEQSSVS--PSSSSGASPQPTASESSTSSCKDCTN 394

Query: 433 D-----DYKQRIVKK 442
                 D +Q++VKK
Sbjct: 395 SWQRVHDLEQQMVKK 409


>U61955-6|AAC24408.2|  505|Caenorhabditis elegans Hypothetical
           protein M03D4.4a protein.
          Length = 505

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 7/75 (9%)

Query: 373 DLGWDIPCARRGRRFSAISLKQENSRKAMHCGGCPGCDNNIRPQKAVALTRSNSCKSCVS 432
           DL  D  CA   ++ S + L + +  +       P   +   PQ   + + ++SCK C +
Sbjct: 386 DLATDTSCASSPQKTSPLQLLESSCLEQSSVS--PSSSSGASPQPTASESSTSSCKDCTN 443

Query: 433 D-----DYKQRIVKK 442
                 D +Q++VKK
Sbjct: 444 SWQRVHDLEQQMVKK 458


>U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channel,
            alpha subunitprotein 1, isoform f protein.
          Length = 1418

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 712  KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771
            +S  + K+ +EE+ +  A    + D R + +  I   T+ P ++N   P   T Q   SP
Sbjct: 884  ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 941

Query: 772  IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828
             E  + R +  ++ P   +RK    +   ++K ++L+++  F         D  + +   
Sbjct: 942  EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1000

Query: 829  AITQKIGN 836
            ++   + N
Sbjct: 1001 SLVLPVAN 1008


>U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel,
            alpha subunitprotein 1, isoform c protein.
          Length = 1852

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 712  KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771
            +S  + K+ +EE+ +  A    + D R + +  I   T+ P ++N   P   T Q   SP
Sbjct: 884  ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 941

Query: 772  IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828
             E  + R +  ++ P   +RK    +   ++K ++L+++  F         D  + +   
Sbjct: 942  EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1000

Query: 829  AITQKIGN 836
            ++   + N
Sbjct: 1001 SLVLPVAN 1008


>U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel,
            alpha subunitprotein 1, isoform a protein.
          Length = 1837

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 712  KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771
            +S  + K+ +EE+ +  A    + D R + +  I   T+ P ++N   P   T Q   SP
Sbjct: 884  ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 941

Query: 772  IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828
             E  + R +  ++ P   +RK    +   ++K ++L+++  F         D  + +   
Sbjct: 942  EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1000

Query: 829  AITQKIGN 836
            ++   + N
Sbjct: 1001 SLVLPVAN 1008


>U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel,
            alpha subunitprotein 1, isoform d protein.
          Length = 1885

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 712  KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771
            +S  + K+ +EE+ +  A    + D R + +  I   T+ P ++N   P   T Q   SP
Sbjct: 932  ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 989

Query: 772  IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828
             E  + R +  ++ P   +RK    +   ++K ++L+++  F         D  + +   
Sbjct: 990  EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1048

Query: 829  AITQKIGN 836
            ++   + N
Sbjct: 1049 SLVLPVAN 1056


>U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel,
            alpha subunitprotein 1, isoform e protein.
          Length = 1844

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 712  KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771
            +S  + K+ +EE+ +  A    + D R + +  I   T+ P ++N   P   T Q   SP
Sbjct: 891  ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 948

Query: 772  IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828
             E  + R +  ++ P   +RK    +   ++K ++L+++  F         D  + +   
Sbjct: 949  EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1007

Query: 829  AITQKIGN 836
            ++   + N
Sbjct: 1008 SLVLPVAN 1015


>AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltage
            sensitive calciumchannel alpha1 subunit isoform D
            protein.
          Length = 1844

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 712  KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771
            +S  + K+ +EE+ +  A    + D R + +  I   T+ P ++N   P   T Q   SP
Sbjct: 891  ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 948

Query: 772  IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828
             E  + R +  ++ P   +RK    +   ++K ++L+++  F         D  + +   
Sbjct: 949  EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1007

Query: 829  AITQKIGN 836
            ++   + N
Sbjct: 1008 SLVLPVAN 1015


>AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calcium
            channel alpha1 subunitisoform C protein.
          Length = 1852

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 712  KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771
            +S  + K+ +EE+ +  A    + D R + +  I   T+ P ++N   P   T Q   SP
Sbjct: 884  ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 941

Query: 772  IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828
             E  + R +  ++ P   +RK    +   ++K ++L+++  F         D  + +   
Sbjct: 942  EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1000

Query: 829  AITQKIGN 836
            ++   + N
Sbjct: 1001 SLVLPVAN 1008


>AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calcium
            channel alpha1 subunitisoform B protein.
          Length = 1885

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 712  KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771
            +S  + K+ +EE+ +  A    + D R + +  I   T+ P ++N   P   T Q   SP
Sbjct: 932  ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 989

Query: 772  IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828
             E  + R +  ++ P   +RK    +   ++K ++L+++  F         D  + +   
Sbjct: 990  EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1048

Query: 829  AITQKIGN 836
            ++   + N
Sbjct: 1049 SLVLPVAN 1056


>AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calcium
            channel alpha1 subunitisoform A protein.
          Length = 1837

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 712  KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771
            +S  + K+ +EE+ +  A    + D R + +  I   T+ P ++N   P   T Q   SP
Sbjct: 884  ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 941

Query: 772  IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828
             E  + R +  ++ P   +RK    +   ++K ++L+++  F         D  + +   
Sbjct: 942  EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1000

Query: 829  AITQKIGN 836
            ++   + N
Sbjct: 1001 SLVLPVAN 1008


>AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-dependent
            calcium channelalpha13 subunit protein.
          Length = 1837

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 26/128 (20%), Positives = 56/128 (43%), Gaps = 6/128 (4%)

Query: 712  KSWRDVKKAVEEENKLNAHVFGQLDNRSQSISEISVNTSEPMYDNTSNPGPLTIQVRGSP 771
            +S  + K+ +EE+ +  A    + D R + +  I   T+ P ++N   P   T Q   SP
Sbjct: 884  ESKEEEKRQLEEDARKQA--VEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSP 941

Query: 772  IE--TRRKIKDDFDPDTLDRKPKHEVKKRVEK-ILLKSAGSFKCKSTPSENDTYKKSPQM 828
             E  + R +  ++ P   +RK    +   ++K ++L+++  F         D  + +   
Sbjct: 942  EESPSPRLLSANYHPSP-ERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHA 1000

Query: 829  AITQKIGN 836
            ++   + N
Sbjct: 1001 SLVLPVAN 1008


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.315    0.131    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,721,970
Number of Sequences: 27539
Number of extensions: 1008446
Number of successful extensions: 2914
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2874
Number of HSP's gapped (non-prelim): 58
length of query: 1101
length of database: 12,573,161
effective HSP length: 89
effective length of query: 1012
effective length of database: 10,122,190
effective search space: 10243656280
effective search space used: 10243656280
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)

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