Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001897-TA|BGIBMGA001897-PA|IPR006768|Protein similar to
CwfJ, C-terminal 1, IPR006767|Protein similar to CwfJ, C-terminal 2
(478 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0048 + 11880848-11880952,11881030-11881312,11882667-118827... 163 2e-40
04_04_1189 + 31586991-31587291,31587358-31587397,31587449-315875... 31 2.0
09_02_0173 + 5323749-5324602,5324681-5324851,5324934-5325222,532... 31 2.7
04_04_1334 - 32723950-32724121,32724527-32724558,32724665-327247... 31 2.7
10_07_0019 + 11931519-11932310 30 4.7
06_03_0213 - 18063536-18063707,18063786-18064186,18064317-18064706 30 4.7
06_02_0129 + 12151133-12151840,12151919-12152365,12152453-121533... 30 4.7
12_02_0167 - 14824241-14824279,14824385-14824423,14824509-148247... 29 6.1
07_03_0677 + 20620873-20621401,20621555-20621580,20621659-206221... 29 6.1
03_04_0081 + 17130557-17130964,17130971-17131085,17131239-171312... 29 6.1
12_02_1001 - 25162761-25162977,25163060-25163230,25163309-251638... 29 8.1
12_02_0095 + 13559997-13560232,13561295-13561683,13562092-135623... 29 8.1
11_05_0074 + 18850567-18851095,18851249-18851274,18851353-188516... 29 8.1
11_04_0039 + 12679350-12680057,12680136-12680582,12680670-126815... 29 8.1
11_03_0217 - 11828305-11828343,11828449-11828487,11828573-118288... 29 8.1
10_07_0171 + 13792362-13793078,13793157-13793517,13793691-137939... 29 8.1
10_01_0169 - 1899491-1899666,1901358-1901638,1902468-1902477,190... 29 8.1
09_01_0133 - 1998528-1998566,1998672-1998710,1998796-1998946,199... 29 8.1
08_01_1037 - 10536547-10536585,10536814-10537102,10537202-105373... 29 8.1
08_01_0991 + 10030636-10031064,10031209-10031364,10031443-100315... 29 8.1
06_03_0098 - 16621473-16621511,16621617-16621655,16621741-166220... 29 8.1
06_02_0221 - 13209197-13209247,13209605-13209893,13209976-132101... 29 8.1
05_07_0317 - 29193940-29193978,29194208-29194496,29194579-291947... 29 8.1
05_04_0369 - 20691100-20691235,20691318-20691488,20691540-206919... 29 8.1
05_03_0642 + 16510041-16510569,16510723-16510748,16510827-165112... 29 8.1
05_03_0266 + 11303932-11304072,11304150-11304185,11304640-113049... 29 8.1
04_04_0376 + 24809804-24809888,24810575-24810703,24810797-248110... 29 8.1
04_03_0073 - 10702352-10702619,10702702-10702836,10702915-10703594 29 8.1
03_06_0262 + 32730927-32731634,32731713-32732159,32732247-327331... 29 8.1
03_03_0235 - 15688002-15688040,15688146-15688184,15688270-156885... 29 8.1
02_03_0247 - 16809742-16809780,16810070-16810298,16810381-168105... 29 8.1
02_01_0539 + 3941189-3941896,3942110-3942394,3942508-3943394,394... 29 8.1
>09_03_0048 +
11880848-11880952,11881030-11881312,11882667-11882770,
11883998-11884416,11884698-11884998,11885136-11885232,
11885719-11885864,11885975-11886103
Length = 527
Score = 163 bits (397), Expect = 2e-40
Identities = 85/227 (37%), Positives = 131/227 (57%), Gaps = 13/227 (5%)
Query: 252 KPESKKRNIEPEECWFCLSSPKVESHLVICVGTLCYLALAKGPLTPYHVLILPIQHHQST 311
KP S++R +E CWFCLSSP VESHLVI +G Y ALAKGPL P HVL++P++H ST
Sbjct: 301 KPRSERRRVE-SSCWFCLSSPDVESHLVISIGEGYYCALAKGPLVPNHVLVIPVEHCSST 359
Query: 312 TRAPDDVIKEITKFKDTLKKFYATMNMGVVFFE-RNYRTSHMQIQCVPVPRASELQILEV 370
+ P + E+ ++KD L K++ ++FE + ++ H +Q VPVP + + ++
Sbjct: 360 LKMPVEAEAELGRYKDALAKYFEKQGKIAIYFEWVSQQSRHANLQAVPVPLSKASSVKKI 419
Query: 371 FQDEAGIASIQMEVLPPYSE-------IRQVTLPGAPYFHAELPSGEQI--YAKTKQHFP 421
F A + V+ P + +R + F+ ELP G + + + FP
Sbjct: 420 FHLAAQRLGFEFSVVNPDGDANRARELLRSECDSKSSLFYVELPEGSVLLHLVDSNEKFP 479
Query: 422 LQFGRDVLSSPPILNCEDKADWRQCQLTKEEEEKHVANFRAKFKPFD 468
QFGR+VL+ +L+ D+ADWR C+++KEEE + V +F+ F+ FD
Sbjct: 480 AQFGREVLAG--LLSMADRADWRNCKVSKEEEIQMVDDFKQGFREFD 524
Score = 46.4 bits (105), Expect = 5e-05
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 135 RYHFVPSKDKFFERQPYRNQSMHQDYRECATRFIALAPVGNNLKEKWIYACSLQPISKMR 194
R+ SK F+ R+PY + S TRFI LA VGN K+K+I+A S P S M
Sbjct: 125 RFTLHGSKGVFYAREPYVSDSAAH-----VTRFIGLANVGNKEKQKFIHAISPTPASTMS 179
Query: 195 MTDLLQATTDETPCPY 210
D+ + T PY
Sbjct: 180 SVDIHARPPNTTLSPY 195
>04_04_1189 +
31586991-31587291,31587358-31587397,31587449-31587534,
31587535-31588097,31588250-31589913,31589956-31590066,
31590152-31591181,31591234-31591406,31591535-31591814,
31592275-31592331
Length = 1434
Score = 31.1 bits (67), Expect = 2.0
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 299 HVLILPIQHHQSTTRAPDDVIKEITKFKDTLKKFYATMNMGVVFFERNYRTSHMQIQCVP 358
H+ I+ H AP+D + I KF++ L+K + + F T +
Sbjct: 566 HLSIITTSHEND---APEDFL--IEKFEEILQKIRPFQKLRSLMFFGQSSTKLLNPTLTF 620
Query: 359 VPRASELQILEVFQDEAGIASIQMEVLPPYSEIRQVTLPGAPYFHAELP 407
A L++L V+ AGI S+Q L PY +R + GA Y LP
Sbjct: 621 CKEAKCLRLLRVYVSNAGINSLQ-NSLNPY-HLRYLEFIGA-YGDVVLP 666
>09_02_0173 +
5323749-5324602,5324681-5324851,5324934-5325222,
5325452-5325490
Length = 450
Score = 30.7 bits (66), Expect = 2.7
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V +++ +GT C
Sbjct: 179 DLGKGQEKTKGKEVKKKYVAPQE--FQLGMPLVGDDVLVAMGTAC 221
>04_04_1334 -
32723950-32724121,32724527-32724558,32724665-32724708,
32724962-32725123,32725984-32726422
Length = 282
Score = 30.7 bits (66), Expect = 2.7
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 375 AGIASIQMEVLPPYSEIRQVTLPGAPYFHAELPSGEQIYAKTKQHFPLQFGRDVLSS 431
A AS E LPPY TLPG+P++ L + Y P GR+ + +
Sbjct: 52 ASPASGCSEALPPYPAPGSYTLPGSPWWAENLSEEDATYFSLADSDPPGKGREEMDA 108
>10_07_0019 + 11931519-11932310
Length = 263
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 240 DDDQGKRKRGTDKPESKKRNIEPEEC--WFCLSSP 272
DDD + +RG+ + E++ R P C W+C S P
Sbjct: 15 DDDDDEHRRGSVEGEARPRATLPLRCRRWWCRSEP 49
>06_03_0213 - 18063536-18063707,18063786-18064186,18064317-18064706
Length = 320
Score = 29.9 bits (64), Expect = 4.7
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T+ E KK+ + P+E F L P V ++ +GT C
Sbjct: 159 DLGKGQEETNGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTAC 201
>06_02_0129 +
12151133-12151840,12151919-12152365,12152453-12153339,
12153418-12153588,12153671-12153935,12155208-12155247,
12155846-12155929,12156058-12156167
Length = 903
Score = 29.9 bits (64), Expect = 4.7
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK ++ T E KK+ + P+E F L P V ++ +GT C
Sbjct: 575 DLGKGQKETKGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTAC 617
>12_02_0167 -
14824241-14824279,14824385-14824423,14824509-14824797,
14824898-14824991,14825129-14825639,14825751-14826014,
14826103-14826549,14826628-14826801,14827003-14827323
Length = 725
Score = 29.5 bits (63), Expect = 6.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 467 DLGKGQEETKGKEGKKKYVAPQE--FQLGMPLVGDGVLAAMGTTC 509
>07_03_0677 +
20620873-20621401,20621555-20621580,20621659-20622105,
20622193-20623079,20623158-20623328,20623411-20623603,
20623785-20623823,20623929-20623967
Length = 776
Score = 29.5 bits (63), Expect = 6.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 524 DLGKGQEETKGKEVKKKYVAPQE--FQLGMPLVGDDMLAAMGTTC 566
>03_04_0081 +
17130557-17130964,17130971-17131085,17131239-17131264,
17131508-17131789,17131877-17132600,17132608-17132830,
17132909-17133079,17133162-17133450,17133536-17133574,
17133680-17133718
Length = 771
Score = 29.5 bits (63), Expect = 6.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 467 DLGKGQEETKGKEVKKKYVAPQE--FQLGMPLVGDDMLAAMGTAC 509
>12_02_1001 -
25162761-25162977,25163060-25163230,25163309-25163814,
25163827-25164195,25164283-25164729,25164808-25164833,
25164987-25165515
Length = 754
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 520 DLGKGQEETKGKEVKKKYVAPQE--FQLDMPLVGDDVLAAMGTTC 562
>12_02_0095 +
13559997-13560232,13561295-13561683,13562092-13562387,
13562475-13563361,13563440-13563562,13563693-13563981,
13564211-13564249
Length = 752
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 497 DLGKGQEETKGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTAC 539
>11_05_0074 +
18850567-18851095,18851249-18851274,18851353-18851645,
18851898-18852699,18852874-18853022,18853105-18853393,
18853479-18853517,18853623-18853661
Length = 721
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 469 DLGKGQEETKGKEVKKKYVTPQE--FQLGMPLVGDDVLAAMGTAC 511
>11_04_0039 +
12679350-12680057,12680136-12680582,12680670-12681556,
12681635-12681805,12681872-12682160,12682390-12682428
Length = 846
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 575 DLGKGQEETKGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTAC 617
>11_03_0217 -
11828305-11828343,11828449-11828487,11828573-11828861,
11828944-11829114,11829193-11830079,11830167-11830346,
11830692-11831399
Length = 770
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 486 DLGKGQEETKGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTAC 528
>10_07_0171 +
13792362-13793078,13793157-13793517,13793691-13793953,
13797770-13798246
Length = 605
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 512 DLGKDQEETKGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTAC 554
>10_01_0169 -
1899491-1899666,1901358-1901638,1902468-1902477,
1902696-1902786,1903993-1904031,1904117-1904405,
1904488-1904658,1904737-1905623,1905711-1906157,
1906236-1906460,1906536-1906943
Length = 1007
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 550 DLGKGQEETKGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTAC 592
>09_01_0133 -
1998528-1998566,1998672-1998710,1998796-1998946,
1999185-1999337,1999416-2000302,2000390-2000836,
2000915-2001190,2001215-2001622
Length = 799
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 567 DLGKGQEETKGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTAC 609
>08_01_1037 -
10536547-10536585,10536814-10537102,10537202-10537327,
10537336-10538291,10538379-10538825,10538904-10539632
Length = 861
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 582 DLGKGQEETKGKEVKKKYVAPQE--FRLGMPLVGDDVLAAMGTAC 624
>08_01_0991 +
10030636-10031064,10031209-10031364,10031443-10031554,
10031710-10031876,10031962-10032848,10032927-10032987,
10033009-10033097,10033180-10033468,10033520-10033564
Length = 744
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 478 DLGKGQEETKGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTAC 520
>06_03_0098 -
16621473-16621511,16621617-16621655,16621741-16622029,
16622112-16622282,16622361-16623244,16623332-16623775,
16623854-16624561
Length = 857
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 574 DLGKGQEETKGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTAC 616
>06_02_0221 -
13209197-13209247,13209605-13209893,13209976-13210146,
13210257-13211110,13211197-13211643,13211722-13212021,
13212130-13212450
Length = 810
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 546 DLGKGQEETKGKEVKKKYVTPQE--FQLGMPLVGDDVLAAMGTAC 588
>05_07_0317 -
29193940-29193978,29194208-29194496,29194579-29194749,
29194829-29195715,29195803-29196249,29196328-29197056
Length = 853
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 582 DLGKGQEETKGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTAC 624
>05_04_0369 -
20691100-20691235,20691318-20691488,20691540-20691940,
20692084-20692452,20692540-20692986,20693065-20693772
Length = 743
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 527 DLGKGQEETKGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTAC 569
>05_03_0642 +
16510041-16510569,16510723-16510748,16510827-16511273,
16511360-16512246,16512325-16512495,16512578-16512866,
16512952-16512990,16513096-16513134
Length = 808
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 524 DLGKGQEETKGKEVKKKYVTPQE--FQLGMPLVGDDVLAAMGTAC 566
>05_03_0266 +
11303932-11304072,11304150-11304185,11304640-11304903,
11305157-11305524,11305603-11305773,11305853-11306141,
11306373-11306393
Length = 429
Score = 29.1 bits (62), Expect = 8.1
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T + E KK+ + P++ F L P V ++ +GT C
Sbjct: 165 DLGKGQEETKRKEVKKKYVAPQD--FQLGMPLVGDDVLATMGTAC 207
>04_04_0376 +
24809804-24809888,24810575-24810703,24810797-24811020,
24811398-24811607,24811697-24811789,24811899-24811937,
24812041-24812130,24812214-24812316,24812388-24812468,
24812929-24813005,24813156-24813236,24814165-24814256,
24814536-24814662
Length = 476
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 245 KRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVI 280
K+++ ++KP KK +P + WF L KV +H+ +
Sbjct: 204 KKRKSSEKPADKKEANKPPDSWFDL---KVNTHVYV 236
>04_03_0073 - 10702352-10702619,10702702-10702836,10702915-10703594
Length = 360
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 121 DLGKGQEETKGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTAC 163
>03_06_0262 +
32730927-32731634,32731713-32732159,32732247-32733133,
32733212-32733382,32733465-32733753,32733839-32733877,
32733983-32734021
Length = 859
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 575 DLGKGQEETKGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTAC 617
>03_03_0235 -
15688002-15688040,15688146-15688184,15688270-15688558,
15688641-15688811,15688907-15689400,15690377-15690819,
15690921-15690933
Length = 495
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 217 DLGKGQEETKGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTAC 259
>02_03_0247 -
16809742-16809780,16810070-16810298,16810381-16810551,
16810630-16811516,16811604-16812050,16812129-16812836
Length = 826
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 575 DLGKGQEETKGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTTC 617
>02_01_0539 +
3941189-3941896,3942110-3942394,3942508-3943394,
3943473-3943643,3943726-3943744,3943763-3944014,
3944100-3944138,3944244-3944282
Length = 799
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 242 DQGKRKRGTDKPESKKRNIEPEECWFCLSSPKVESHLVICVGTLC 286
D GK + T E KK+ + P+E F L P V ++ +GT C
Sbjct: 521 DLGKGQEETKGKEVKKKYVAPQE--FQLGMPLVGDDVLAAMGTAC 563
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.136 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,475,668
Number of Sequences: 37544
Number of extensions: 701670
Number of successful extensions: 1314
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1306
Number of HSP's gapped (non-prelim): 37
length of query: 478
length of database: 14,793,348
effective HSP length: 85
effective length of query: 393
effective length of database: 11,602,108
effective search space: 4559628444
effective search space used: 4559628444
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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