Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001897-TA|BGIBMGA001897-PA|IPR006768|Protein similar to
CwfJ, C-terminal 1, IPR006767|Protein similar to CwfJ, C-terminal 2
(478 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 27 0.26
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 23 5.6
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 9.8
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 9.8
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 9.8
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 9.8
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 22 9.8
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 9.8
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 9.8
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 9.8
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 22 9.8
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 27.5 bits (58), Expect = 0.26
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 11/81 (13%)
Query: 130 IHIKPRYHFVPSKDKFFERQPYRNQ----SMHQDYRECATRFIALAP----VGNNLKEKW 181
+H+ ++ ++ ++ KF PY NQ +D T +++ P GNN+K+
Sbjct: 62 VHMMLQFRYLDARLKFSNIAPYLNQIYGGQFVRDLIWTPTVYVSNEPSSAITGNNVKDVL 121
Query: 182 IYACSLQPISKMRMTDLLQAT 202
+ S+ P +R+ LQAT
Sbjct: 122 V---SIDPSGMVRLNTRLQAT 139
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 23.0 bits (47), Expect = 5.6
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 194 RMTDLLQATTDETPCPYDPEMLKQHQPGKVVKFTGNGQ 231
+ T +Q + + P DP +L+Q PG G+ Q
Sbjct: 36 QQTQSVQQQSQQAGDPCDPSLLRQGVPGHHYGAAGSQQ 73
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 9.8
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 141 SKDKFFERQPYRNQSMHQDYRE 162
S+ + E++ Y+N++ ++ YRE
Sbjct: 40 SRSREREKKSYKNENSYRKYRE 61
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 9.8
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 141 SKDKFFERQPYRNQSMHQDYRE 162
S+ + E++ Y+N++ ++ YRE
Sbjct: 40 SRSREREKKSYKNENSYRKYRE 61
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 22.2 bits (45), Expect = 9.8
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 141 SKDKFFERQPYRNQSMHQDYRE 162
S+ + E++ Y+N++ ++ YRE
Sbjct: 40 SRSREREKKSYKNENSYRKYRE 61
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 9.8
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 141 SKDKFFERQPYRNQSMHQDYRE 162
S+ + E++ Y+N++ ++ YRE
Sbjct: 40 SRSREREKKSYKNENSYRKYRE 61
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 22.2 bits (45), Expect = 9.8
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 228 GNGQFFFDMNAPDDDQGKRKRGTDKPESKKRNIEPEECWFC 268
G G+ F N +DD K+ ++ + E W C
Sbjct: 28 GKGRGFIIQNNNNDDWSVGKKNSNSGTINESEFNDENYWQC 68
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 9.8
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 407 PSGEQIYAKTKQHFPLQFGRDVLSSPPILNCEDKAD 442
P G QI A Q L+ RD+ I E K D
Sbjct: 107 PEGIQINATELQKIKLEIHRDLPGKSTITTVEVKRD 142
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 9.8
Identities = 13/36 (36%), Positives = 15/36 (41%)
Query: 407 PSGEQIYAKTKQHFPLQFGRDVLSSPPILNCEDKAD 442
P G QI A Q L+ RD+ I E K D
Sbjct: 118 PEGIQINATELQKIELEIRRDLPGKSTITTVEVKRD 153
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 9.8
Identities = 7/22 (31%), Positives = 16/22 (72%)
Query: 141 SKDKFFERQPYRNQSMHQDYRE 162
S+ + E++ Y+N++ ++ YRE
Sbjct: 273 SRSREREKKSYKNENSYRKYRE 294
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 22.2 bits (45), Expect = 9.8
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 34 NVIYMGRRGLFNTSTDVKIAYLTGL 58
NV Y G + +FNT + KI G+
Sbjct: 293 NVQYQGVQDIFNTESIAKIMSKNGV 317
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.320 0.136 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,762
Number of Sequences: 429
Number of extensions: 7123
Number of successful extensions: 75
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 65
Number of HSP's gapped (non-prelim): 11
length of query: 478
length of database: 140,377
effective HSP length: 60
effective length of query: 418
effective length of database: 114,637
effective search space: 47918266
effective search space used: 47918266
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)
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