Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001897-TA|BGIBMGA001897-PA|IPR006768|Protein similar to
CwfJ, C-terminal 1, IPR006767|Protein similar to CwfJ, C-terminal 2
(478 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g56900.2 68418.m07101 CwfJ-like family protein / zinc finger ... 142 6e-34
At5g56900.1 68418.m07100 CwfJ-like family protein / zinc finger ... 142 6e-34
At1g56290.1 68414.m06471 CwfJ-like family protein contains Pfam ... 88 1e-17
At2g36760.1 68415.m04509 UDP-glucoronosyl/UDP-glucosyl transfera... 39 0.008
At2g36800.1 68415.m04513 UDP-glucoronosyl/UDP-glucosyl transfera... 36 0.045
At2g36790.1 68415.m04512 UDP-glucoronosyl/UDP-glucosyl transfera... 35 0.10
At2g36780.1 68415.m04511 UDP-glucoronosyl/UDP-glucosyl transfera... 35 0.14
At2g36750.1 68415.m04508 UDP-glucoronosyl/UDP-glucosyl transfera... 33 0.42
At2g36770.1 68415.m04510 UDP-glucoronosyl/UDP-glucosyl transfera... 33 0.55
At3g53160.1 68416.m05858 UDP-glucoronosyl/UDP-glucosyl transfera... 32 0.96
At3g11840.1 68416.m01451 U-box domain-containing protein low sim... 30 2.9
>At5g56900.2 68418.m07101 CwfJ-like family protein / zinc finger
(CCCH-type) family protein contains Pfam domain,
PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and
similar), PF04677: Protein similar to CwfJ C-terminus 1,
PF04676: Protein similar to CwfJ C-terminus 2
Length = 593
Score = 142 bits (343), Expect = 6e-34
Identities = 80/227 (35%), Positives = 127/227 (55%), Gaps = 14/227 (6%)
Query: 252 KPESKKRNIEPEECWFCLSSPKVESHLVICVGTLCYLALAKGPLTPYHVLILPIQHHQST 311
KP S+ N +ECWFCLSSP VESHL++ VG Y AL KG L H+LI+PI+H +T
Sbjct: 368 KPRSENAN-RSKECWFCLSSPSVESHLIVSVGESFYCALPKGSLVEDHILIIPIEHLPNT 426
Query: 312 TRAPDDVIKEITKFKDTLKKFYATMNMGVVFFER-NYRTSHMQIQCVPVPRASELQILEV 370
+V E++++++ L+ Y + VFFE + R SH +Q VPVP + + +
Sbjct: 427 LVLSPEVESELSRYQNGLRNCYKSQGNDAVFFELVSKRVSHANLQVVPVPSSRARLLPNI 486
Query: 371 FQDEAGIASIQMEVLPPYSE-------IRQVTLPGAPYFHAELPSGEQIYAKTKQH--FP 421
F A ++ V +++ +++ F+ ELP G + +++ FP
Sbjct: 487 FSLAAEKLGFKL-VTKKFNDSTDGRKYLQKEYNAALGLFYVELPDGTVLSHTLEENEVFP 545
Query: 422 LQFGRDVLSSPPILNCEDKADWRQCQLTKEEEEKHVANFRAKFKPFD 468
QFGR+VL+ +L D+ADWR C++++EEE K +F+ +F+ FD
Sbjct: 546 AQFGREVLAG--LLKIPDRADWRNCKISQEEEAKLAEDFKKQFQEFD 590
Score = 70.1 bits (164), Expect = 3e-12
Identities = 61/192 (31%), Positives = 88/192 (45%), Gaps = 27/192 (14%)
Query: 27 EGSEIVPNVIYMGRRGLFNTSTDVKIAYLTGL--SRRELGKDVPMCTYEPSDCSAVRDAC 84
+G E+ N+ ++ G F+ + +AYL+G S + GK Y D A+R
Sbjct: 95 DGLEVCHNLFWLRGSGKFSLH-GLSVAYLSGRQSSESQFGK------YSQDDVDALRALA 147
Query: 85 FRGQSEFRGVDVLITTLWPSGIQQDECQT---VDVEQDRLSD-LLSWLAIHIKPRYHFVP 140
E G IT WP+G+ + V + SD +S L + +KPRYH
Sbjct: 148 ----EEPGGC---ITNEWPAGVTNRAAVSDIPVGISDSSCSDSTVSELVMEVKPRYHIAG 200
Query: 141 SKDKFFERQPYRN-QSMHQDYRECATRFIALAPVGNNLKEKWIYACSLQPISKMRMTDLL 199
S F+ R+PY N +S H TRFI LA VGN K+K+++A S P S M +L
Sbjct: 201 SMGVFYAREPYLNAESTH------VTRFIGLAQVGNKNKQKFLHALSPTPTSTMSPAELS 254
Query: 200 QATTDETPCPYD 211
T PY+
Sbjct: 255 AKPPKTTLWPYN 266
>At5g56900.1 68418.m07100 CwfJ-like family protein / zinc finger
(CCCH-type) family protein contains Pfam domain,
PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and
similar), PF04677: Protein similar to CwfJ C-terminus 1,
PF04676: Protein similar to CwfJ C-terminus 2
Length = 404
Score = 142 bits (343), Expect = 6e-34
Identities = 80/227 (35%), Positives = 127/227 (55%), Gaps = 14/227 (6%)
Query: 252 KPESKKRNIEPEECWFCLSSPKVESHLVICVGTLCYLALAKGPLTPYHVLILPIQHHQST 311
KP S+ N +ECWFCLSSP VESHL++ VG Y AL KG L H+LI+PI+H +T
Sbjct: 179 KPRSENAN-RSKECWFCLSSPSVESHLIVSVGESFYCALPKGSLVEDHILIIPIEHLPNT 237
Query: 312 TRAPDDVIKEITKFKDTLKKFYATMNMGVVFFER-NYRTSHMQIQCVPVPRASELQILEV 370
+V E++++++ L+ Y + VFFE + R SH +Q VPVP + + +
Sbjct: 238 LVLSPEVESELSRYQNGLRNCYKSQGNDAVFFELVSKRVSHANLQVVPVPSSRARLLPNI 297
Query: 371 FQDEAGIASIQMEVLPPYSE-------IRQVTLPGAPYFHAELPSGEQIYAKTKQH--FP 421
F A ++ V +++ +++ F+ ELP G + +++ FP
Sbjct: 298 FSLAAEKLGFKL-VTKKFNDSTDGRKYLQKEYNAALGLFYVELPDGTVLSHTLEENEVFP 356
Query: 422 LQFGRDVLSSPPILNCEDKADWRQCQLTKEEEEKHVANFRAKFKPFD 468
QFGR+VL+ +L D+ADWR C++++EEE K +F+ +F+ FD
Sbjct: 357 AQFGREVLAG--LLKIPDRADWRNCKISQEEEAKLAEDFKKQFQEFD 401
Score = 57.2 bits (132), Expect = 2e-08
Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 130 IHIKPRYHFVPSKDKFFERQPYRN-QSMHQDYRECATRFIALAPVGNNLKEKWIYACSLQ 188
+ +KPRYH S F+ R+PY N +S H TRFI LA VGN K+K+++A S
Sbjct: 1 MEVKPRYHIAGSMGVFYAREPYLNAESTH------VTRFIGLAQVGNKNKQKFLHALSPT 54
Query: 189 PISKMRMTDLLQATTDETPCPYD 211
P S M +L T PY+
Sbjct: 55 PTSTMSPAELSAKPPKTTLWPYN 77
>At1g56290.1 68414.m06471 CwfJ-like family protein contains Pfam
profiles PF04677: Protein similar to CwfJ N terminus 1,
PF04676: Protein similar to CwfJ N terminus 2
Length = 692
Score = 88.2 bits (209), Expect = 1e-17
Identities = 73/256 (28%), Positives = 112/256 (43%), Gaps = 19/256 (7%)
Query: 237 NAPDDDQGKRKRGTDKPESKKR----NIEPEECWFCLSSPKVESHLVICVGTLCYLALAK 292
+AP KR+ ++ PE R + E C FC +PK HLV+ + YL L +
Sbjct: 438 DAPSKKSRKRESSSNIPEKDNRVKRIMTQQERCLFCFENPKRPKHLVVSIANFTYLMLPQ 497
Query: 293 G-PLTPYHVLILPIQHHQSTTRAPDDVIKEITKFKDTLKKFYATMNMGVVFFER----NY 347
PL H ILP+QH ++ D+V EI FK L YA VF E +
Sbjct: 498 HQPLVQGHCCILPMQHEAASRSVDDNVWDEIRNFKKCLIMMYAKEGKDAVFLETVIGLSQ 557
Query: 348 RTSHMQIQCVPVPR--ASE-----LQILEVFQDEAGIASIQMEVLPPYSEIRQVTLPGAP 400
+ H I+C+P+P+ A E + ++ + E + + + +R P
Sbjct: 558 QRRHCLIECIPIPQEIAKEGPLYFKKAIDEAESEWSQHNAKKLIDTSVKGLRNSIPKNFP 617
Query: 401 YFHAE--LPSGEQIYAKTKQHFPLQFGRDVLSSPPILNCEDKADWRQCQLTKEEEEKHVA 458
YFH E L G +Q F G +V+ L ED R+ Q + E ++K VA
Sbjct: 618 YFHVEFGLDKGFVHVIDDEQQFNSNLGLNVIRGMLELPEEDMYR-RRRQESVESQKKAVA 676
Query: 459 NFRAKFKPFDFTVEDD 474
F +++ FD+T + D
Sbjct: 677 TFAREWEHFDWTKQLD 692
>At2g36760.1 68415.m04509 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 496
Score = 38.7 bits (86), Expect = 0.008
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 247 KRGTDKPE-SKKRNIEPEECWFCLSSPKVESHLVICVGTLCYLALAK 292
K G DK E K I+ +EC L S VES L +C+G++C L LA+
Sbjct: 259 KVGEDKAERGNKAAIDQDECIKWLDSKDVESVLYVCLGSICNLPLAQ 305
>At2g36800.1 68415.m04513 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 495
Score = 36.3 bits (80), Expect = 0.045
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 247 KRGTDKPE-SKKRNIEPEECWFCLSSPKVESHLVICVGTLCYLALAK 292
K G DK E K +I+ +EC L S K S L +C+G++C L L++
Sbjct: 258 KVGADKAERGNKSDIDQDECLKWLDSKKHGSVLYVCLGSICNLPLSQ 304
>At2g36790.1 68415.m04512 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 495
Score = 35.1 bits (77), Expect = 0.10
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 247 KRGTDKPE-SKKRNIEPEECWFCLSSPKVESHLVICVGTLCYLALAK 292
K G DK E K +I+ +EC L S + S L +C+G++C L L++
Sbjct: 258 KVGVDKAERGNKSDIDQDECLEWLDSKEPGSVLYVCLGSICNLPLSQ 304
>At2g36780.1 68415.m04511 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 496
Score = 34.7 bits (76), Expect = 0.14
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 247 KRGTDKPE-SKKRNIEPEECWFCLSSPKVESHLVICVGTLCYLALAK 292
K G DK E K I+ +EC L S + S L +C+G++C L L++
Sbjct: 259 KAGADKAERGSKAAIDQDECLQWLDSKEEGSVLYVCLGSICNLPLSQ 305
>At2g36750.1 68415.m04508 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 491
Score = 33.1 bits (72), Expect = 0.42
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 247 KRGTDKPE-SKKRNIEPEECWFCLSSPKVESHLVICVGTLCYLALAK 292
K G D+ E K +I+ +EC L S + S L +C+G++C L L++
Sbjct: 254 KLGEDQAERGNKADIDQDECIKWLDSKEEGSVLYVCLGSICNLPLSQ 300
>At2g36770.1 68415.m04510 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 496
Score = 32.7 bits (71), Expect = 0.55
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 247 KRGTDKPE-SKKRNIEPEECWFCLSSPKVESHLVICVGTLCYLALAK 292
K G DK E + I+ +EC L S + S L +C+G++C L L++
Sbjct: 259 KAGADKAERGNQAAIDQDECLQWLDSKEDGSVLYVCLGSICNLPLSQ 305
>At3g53160.1 68416.m05858 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 490
Score = 31.9 bits (69), Expect = 0.96
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 249 GTDKPE-SKKRNIEPEECWFCLSSPKVESHLVICVGTLCYLALAK 292
G DK + K +I ++C L S + S L +C+G+LC L LA+
Sbjct: 255 GLDKAKRGDKASIGQDQCLQWLDSQETGSVLYVCLGSLCNLPLAQ 299
>At3g11840.1 68416.m01451 U-box domain-containing protein low
similarity to immediate-early fungal elicitor protein
CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 470
Score = 30.3 bits (65), Expect = 2.9
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 87 GQSEFRGVDVLITTLWPSGIQQDECQTVDVEQDRLSDLLSWL 128
G+ +G+D + L GI ++ +T+ +E DR+ + L+W+
Sbjct: 174 GRRRIKGLDESLRLLHLIGIPSNDAKTILMENDRVMESLTWV 215
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.136 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,657,273
Number of Sequences: 28952
Number of extensions: 578820
Number of successful extensions: 1170
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1146
Number of HSP's gapped (non-prelim): 17
length of query: 478
length of database: 12,070,560
effective HSP length: 84
effective length of query: 394
effective length of database: 9,638,592
effective search space: 3797605248
effective search space used: 3797605248
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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