GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001896-TA|BGIBMGA001896-PA|IPR003014|N/apple PAN,
IPR001507|Endoglin/CD105 antigen, IPR003609|Apple-like
         (1386 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    27   1.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    27   1.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    27   1.2  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   2.7  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 26.6 bits (56), Expect = 1.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 253 PFEADVFSNMTLEECQAMCVRAEKYFCRSIEHDA 286
           P  A + SN+T+   QA+C       C S+ H A
Sbjct: 227 PSPATIISNVTVISWQAVCTFYNILLCDSVAHTA 260


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 26.6 bits (56), Expect = 1.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 253 PFEADVFSNMTLEECQAMCVRAEKYFCRSIEHDA 286
           P  A + SN+T+   QA+C       C S+ H A
Sbjct: 227 PSPATIISNVTVISWQAVCTFYNILLCDSVAHTA 260


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 26.6 bits (56), Expect = 1.2
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 253 PFEADVFSNMTLEECQAMCVRAEKYFCRSIEHDA 286
           P  A + SN+T+   QA+C       C S+ H A
Sbjct: 547 PSPATIISNVTVISWQAVCTFYNILLCDSVAHTA 580


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
            protein protein.
          Length = 585

 Score = 25.4 bits (53), Expect = 2.7
 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 6/39 (15%)

Query: 979  PEGFYGRIYTYGFYDRCFFR--GNGGVVNLLRISGAHGY 1015
            PEGFYG+   +  YD C      NGGV    RIS   GY
Sbjct: 365  PEGFYGKNCEFSGYD-CDSNPCQNGGV---CRISDGGGY 399


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.138    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 329,281
Number of Sequences: 317
Number of extensions: 16059
Number of successful extensions: 41
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 37
Number of HSP's gapped (non-prelim): 5
length of query: 1386
length of database: 114,650
effective HSP length: 65
effective length of query: 1321
effective length of database: 94,045
effective search space: 124233445
effective search space used: 124233445
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)