Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001896-TA|BGIBMGA001896-PA|IPR003014|N/apple PAN,
IPR001507|Endoglin/CD105 antigen, IPR003609|Apple-like
(1386 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59170.1 68418.m07416 proline-rich family protein contains pr... 84 7e-16
At3g26420.1 68416.m03295 glycine-rich RNA-binding protein simila... 51 5e-06
At5g04280.1 68418.m00421 glycine-rich RNA-binding protein 49 3e-05
At4g19200.1 68417.m02833 proline-rich family protein contains pr... 46 2e-04
At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest ... 44 5e-04
At5g45350.1 68418.m05567 proline-rich family protein contains pr... 43 0.001
At4g34150.1 68417.m04846 C2 domain-containing protein similar to... 43 0.002
At1g05470.1 68414.m00556 endonuclease/exonuclease/phosphatase fa... 37 0.082
At3g49840.1 68416.m05449 proline-rich family protein contains pr... 37 0.11
At4g20440.2 68417.m02983 small nuclear ribonucleoprotein associa... 36 0.25
At4g20440.1 68417.m02982 small nuclear ribonucleoprotein associa... 36 0.25
At3g53160.1 68416.m05858 UDP-glucoronosyl/UDP-glucosyl transfera... 36 0.25
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 35 0.33
At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3) ... 35 0.33
At1g31750.1 68414.m03895 proline-rich family protein contains pr... 35 0.33
At4g15180.1 68417.m02328 SET domain-containing protein contains ... 35 0.44
At4g19590.1 68417.m02879 DNAJ heat shock N-terminal domain-conta... 33 1.0
At1g51580.1 68414.m05806 KH domain-containing protein 33 1.0
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 33 1.3
At1g60650.2 68414.m06828 glycine-rich RNA-binding protein, putat... 33 1.3
At1g60650.1 68414.m06827 glycine-rich RNA-binding protein, putat... 33 1.3
At5g11880.1 68418.m01390 diaminopimelate decarboxylase, putative... 33 1.8
At4g28300.2 68417.m04053 hydroxyproline-rich glycoprotein family... 33 1.8
At4g28300.1 68417.m04052 hydroxyproline-rich glycoprotein family... 33 1.8
At3g20850.1 68416.m02636 proline-rich family protein contains pr... 32 2.3
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 32 2.3
At1g09070.1 68414.m01012 C2 domain-containing protein / src2-lik... 32 2.3
At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing ... 32 3.1
At2g41420.1 68415.m05111 proline-rich family protein contains pr... 32 3.1
At4g10020.1 68417.m01639 short-chain dehydrogenase/reductase (SD... 31 4.1
At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1 (PL... 31 4.1
At5g47010.1 68418.m05794 RNA helicase, putative similar to type ... 31 5.4
At3g42120.1 68416.m04325 hypothetical protein 31 5.4
At2g35230.2 68415.m04322 VQ motif-containing protein contains PF... 31 5.4
At2g35230.1 68415.m04321 VQ motif-containing protein contains PF... 31 5.4
At5g48780.1 68418.m06036 disease resistance protein (TIR-NBS cla... 30 9.5
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 30 9.5
At3g14390.1 68416.m01820 diaminopimelate decarboxylase, putative... 30 9.5
At2g37070.1 68415.m04549 expressed protein 30 9.5
At1g48110.1 68414.m05369 expressed protein contains Pfam profile... 30 9.5
At1g12810.1 68414.m01488 proline-rich family protein contains pr... 30 9.5
>At5g59170.1 68418.m07416 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 288
Score = 83.8 bits (198), Expect = 7e-16
Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 18/153 (11%)
Query: 528 PERYPADRYPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPA 587
P +P +YPP I YP +YPP ++YP I ++PP ++YPP I +YPP ++Y
Sbjct: 79 PYEHPPVKYPPPIKTYPHPPVKYPPP-EQYPPPIKKYPP-PEQYPPPIKKYPP-PEQYSP 135
Query: 588 GIDRYPSNVDRYPGSLDRYPSRYPASNGERFPLDGGRYPTYDPVPNDLGRYPAADRY--P 645
+YP ++YP + +YP E +P +YP + P + +YP ++Y P
Sbjct: 136 PFKKYPP-PEQYPPPIKKYPP------PEHYPPPIKKYPPQEQYPPPIKKYPPPEKYPPP 188
Query: 646 ISRY-PIDVYPDRYPTNRYP---ERFPVRGRYP 674
I +Y P + YP P +YP +++P YP
Sbjct: 189 IKKYPPPEQYPP--PIKKYPPPIKKYPPPEEYP 219
Score = 75.4 bits (177), Expect = 3e-13
Identities = 51/150 (34%), Positives = 78/150 (52%), Gaps = 17/150 (11%)
Query: 527 GPERYPADRYPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYP 586
GP+ + PP I++YPP V +YPP I +YP PP +YPP I YP +YP
Sbjct: 46 GPKFPYSPPKPPPIEKYPPPV-QYPPPIKKYPPPPYEHPP--VKYPPPIKTYPHPPVKYP 102
Query: 587 AGIDRYPSNVDRYPGSLDRYP---SRYPASNGERFPLDGGRYPTYDPVPNDLGRYPAADR 643
++YP + +YP ++YP +YP E++ +YP + P + +YP +
Sbjct: 103 PP-EQYPPPIKKYPPP-EQYPPPIKKYPPP--EQYSPPFKKYPPPEQYPPPIKKYPPPEH 158
Query: 644 Y--PISRY-PIDVYPDRYPTNRY--PERFP 668
Y PI +Y P + YP P +Y PE++P
Sbjct: 159 YPPPIKKYPPQEQYPP--PIKKYPPPEKYP 186
Score = 60.5 bits (140), Expect = 8e-09
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 532 PADRYPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRY-PAGID 590
P ++YPP I +YPP ++YPP I +YP I ++PP + YPP I YP +Y P
Sbjct: 181 PPEKYPPPIKKYPPP-EQYPPPIKKYPPPIKKYPP-PEEYPPPIKTYPHPPVKYPPPPYK 238
Query: 591 RYP-SNVDRYPGSLD--RYPSRYPASNGERFPLDGGRYPTYDPVPNDLGRYPAAD 642
YP + YP + P YP +++P P P P +YP AD
Sbjct: 239 TYPHPPIKTYPPPKECPPPPEHYPWPPKKKYP-----PPVEYPSP-PYKKYPPAD 287
>At3g26420.1 68416.m03295 glycine-rich RNA-binding protein similar
to RNA-binding protein (RZ-1) GB:BAA12064 [Nicotiana
sylvestris]; contains Pfam profile: PF00076 RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 245
Score = 51.2 bits (117), Expect = 5e-06
Identities = 33/70 (47%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 549 RYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPAGIDRYPSNVDRYPGSLDRYPS 608
R+ DRY S DR+ DRY DRY DRY + DRY S DRY GS D S
Sbjct: 144 RFSSKDDRYSSKDDRYGAKDDRYGAKEDRYGAKDDRYSSKDDRYSSKDDRY-GSRDGGGS 202
Query: 609 RY-PASNGER 617
RY P +GER
Sbjct: 203 RYGPDRSGER 212
Score = 48.0 bits (109), Expect = 4e-05
Identities = 27/57 (47%), Positives = 29/57 (50%)
Query: 553 GIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPAGIDRYPSNVDRYPGSLDRYPSR 609
G R+ S DR+ DRY DRY DRY A DRY S DRY DRY SR
Sbjct: 141 GGGRFSSKDDRYSSKDDRYGAKDDRYGAKEDRYGAKDDRYSSKDDRYSSKDDRYGSR 197
>At5g04280.1 68418.m00421 glycine-rich RNA-binding protein
Length = 310
Score = 48.8 bits (111), Expect = 3e-05
Identities = 47/125 (37%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 527 GPERYPA-DRYPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRY 585
G RY A DR+ + Y P DRY DRY + DRF GGDRY G DRYPPG+
Sbjct: 191 GAARYGARDRFDSR-EAYIPR-DRYAS--DRYAAPADRFA-GGDRYSRGSDRYPPGSYDK 245
Query: 586 PAGIDR--YPS-NVDRYPGSLDRYPSRYPASNGERFPLDGGRYPTYDPVPNDLGRYPAA- 641
+R PS DRY G P R G F G G YP++
Sbjct: 246 ARSFERDIAPSAGSDRYGGGRAGGPIRGGGEEGRGFRSRAGAPYERPSRSGGGGAYPSSS 305
Query: 642 --DRY 644
DRY
Sbjct: 306 TFDRY 310
>At4g19200.1 68417.m02833 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 179
Score = 45.6 bits (103), Expect = 2e-04
Identities = 34/86 (39%), Positives = 37/86 (43%), Gaps = 14/86 (16%)
Query: 538 PGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPAGIDRYPSNVD 597
PG YPP+ YPP YP +PP G YPP YPPGA YPA YP
Sbjct: 20 PGGGHYPPAQGGYPP--QGYPPQ-QGYPPAGG-YPPA--GYPPGA--YPAAPGGYPPAPG 71
Query: 598 RYPGSLDRYPSRYPASNGERFPLDGG 623
YP P+ YPA GG
Sbjct: 72 GYP------PAGYPAPGAHHSGHSGG 91
Score = 36.3 bits (80), Expect = 0.14
Identities = 26/67 (38%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 566 PGGDRYPPGIDRYPPGADRYPAGIDRYPSNVDRYPGSLDRYPSRYPASNGERFPLDGGRY 625
PGG YPP YPP YP YP YP + P YPA+ G P GG
Sbjct: 20 PGGGHYPPAQGGYPP--QGYPPQ-QGYPP-AGGYPPA-GYPPGAYPAAPGGYPPAPGGYP 74
Query: 626 PTYDPVP 632
P P P
Sbjct: 75 PAGYPAP 81
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 620 LDGGRYPTYDPVPNDLGRYPAADRYPISR--YPIDVYPDRY---PTNRYPERFPVRGRYP 674
+ GG+ +D +P YP ++ YP YP + P YP G YP
Sbjct: 1 MGGGKDKHHDEQEKGFHGFPGGGHYPPAQGGYPPQGYPPQQGYPPAGGYPPAGYPPGAYP 60
Query: 675 SRPGWY 680
+ PG Y
Sbjct: 61 AAPGGY 66
>At4g35800.1 68417.m05087 DNA-directed RNA polymerase II largest
subunit (RPB205) (RPII) (RPB1) nearly identical to
P|P18616 DNA-directed RNA polymerase II largest subunit
(EC 2.7.7.6) {Arabidopsis thaliana}
Length = 1840
Score = 44.4 bits (100), Expect = 5e-04
Identities = 39/158 (24%), Positives = 51/158 (32%), Gaps = 5/158 (3%)
Query: 536 YPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPAGIDRYPSN 595
Y P Y P+ Y P Y + P Y P Y P + Y Y
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQ 1730
Query: 596 VDRYPGSLDRYPSRYPASNGERFPLDGGRYPTYDP--VPNDLGRYPAADRY-PISRYPID 652
+Y S+ PS S + Y P P P++ Y P S Y
Sbjct: 1731 SAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSG 1790
Query: 653 VYPDRYPTNRYPERFPVRGRYPSRPGWYSNQYSDRFDQ 690
PD P+ Y P G PS G Y+ D+ D+
Sbjct: 1791 ASPDYSPSAGYSPTLP--GYSPSSTGQYTPHEGDKKDK 1826
Score = 33.9 bits (74), Expect = 0.77
Identities = 35/146 (23%), Positives = 44/146 (30%), Gaps = 7/146 (4%)
Query: 536 YPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPAGIDRYPSN 595
Y P Y P+ Y P Y + P Y P Y P + Y Y
Sbjct: 1566 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 596 VDRYPGSLDRYPSRYPASNGERFPLDGGRYPTYDPVPNDLGRYPAADRY-PISRYPIDVY 654
Y + Y PA + P P Y P P + Y P S
Sbjct: 1626 SPSYSPTSPSYSPTSPAYS-PTSPAYSPTSPAYSPTSPSYS--PTSPSYSPTSPSYSPTS 1682
Query: 655 PDRYPTNRYPERFPVRGRY-PSRPGW 679
P PT+ P P Y P+ PG+
Sbjct: 1683 PSYSPTS--PSYSPTSPAYSPTSPGY 1706
Score = 31.9 bits (69), Expect = 3.1
Identities = 35/146 (23%), Positives = 44/146 (30%), Gaps = 7/146 (4%)
Query: 536 YPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPAGIDRYPSN 595
Y P Y PS Y P Y + P Y P Y P + Y Y
Sbjct: 1573 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1632
Query: 596 VDRYPGSLDRYPSRYPASNGERFPLDGGRYPTYDPVPNDLGRYPAADRY-PISRYPIDVY 654
Y + Y PA + P P+Y P P + Y P S
Sbjct: 1633 SPSYSPTSPAYSPTSPAYS-PTSPAYSPTSPSYSPTSPSYS--PTSPSYSPTSPSYSPTS 1689
Query: 655 PDRYPTNRYPERFPVRGRY-PSRPGW 679
P PT+ P P Y P+ P +
Sbjct: 1690 PSYSPTS--PAYSPTSPGYSPTSPSY 1713
Score = 31.5 bits (68), Expect = 4.1
Identities = 40/171 (23%), Positives = 50/171 (29%), Gaps = 7/171 (4%)
Query: 536 YPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPAGIDRYPSN 595
Y P Y P+ Y P Y + P Y P Y P + Y Y
Sbjct: 1545 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 1604
Query: 596 VDRYPGSLDRYPSRYPASNGERFPLDGGRYPTYDPVPNDLGRYPAADRY-PISRYPIDVY 654
Y + Y P S P P+Y P P + Y P S
Sbjct: 1605 SPSYSPTSPSYSPTSP-SYSPTSPSYSPTSPSYSPTSPAYS--PTSPAYSPTSPAYSPTS 1661
Query: 655 PDRYPTNRYPERFPVRGRY-PSRPGWYSNQYSDRFDQDRYSGSDWGRYPYS 704
P PT+ P P Y P+ P + S YS + G P S
Sbjct: 1662 PSYSPTS--PSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTS 1710
>At5g45350.1 68418.m05567 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 177
Score = 43.2 bits (97), Expect = 0.001
Identities = 31/82 (37%), Positives = 37/82 (45%), Gaps = 12/82 (14%)
Query: 528 PERYPADRYPPGIDRYPPSVDRYPPGIDRYPSVIDRFP--PGGDRYP--PGIDRYP--PG 581
P YP YPP YPP+ YPPG YP +P PG YP PG YP PG
Sbjct: 29 PAGYPQQGYPPPPGAYPPA--GYPPG--AYPPAPGGYPPAPGYGGYPPAPGYGGYPPAPG 84
Query: 582 ADRYPAGIDRYPSNVDRYPGSL 603
YP YP++ + G +
Sbjct: 85 HGGYPPA--GYPAHHSGHAGGI 104
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 638 YPAADRYPISRYPIDVYPDRYPTNRYPERFPVRGRYPSRPGWY 680
YP YP + YP YP P YP G YP PG Y
Sbjct: 21 YPPPGAYPPAGYPQQGYPP--PPGAYPPAGYPPGAYPPAPGGY 61
>At4g34150.1 68417.m04846 C2 domain-containing protein similar to
calcium-dependent protein kinase [Dunaliella
tertiolecta] GI:6644464; contains Pfam profile PF00168:
C2 domain
Length = 247
Score = 42.7 bits (96), Expect = 0.002
Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 22/110 (20%)
Query: 571 YPPGIDRY--PPGADRYP-----AGIDRYPSNVDRYPGSLDRYPSRYPASNGERFPLDGG 623
Y P + +Y PP A Y +G YP V +YP PS YP ++G +P
Sbjct: 144 YAPHVPQYSAPPSASPYSTAPPYSGPSLYPQ-VQQYP-----QPSGYPPASG--YPPQPS 195
Query: 624 RYPT-----YDPVPNDLGRYPAADRYPISRYPIDVYPDRYPTNRYPERFP 668
YP Y P+P+ P + YP YP P YP YP ++P
Sbjct: 196 AYPPPSTSGYPPIPSAYPPPPPSSAYPPQPYP--PQPSYYPQGPYPGQYP 243
Score = 42.7 bits (96), Expect = 0.002
Identities = 30/86 (34%), Positives = 35/86 (40%), Gaps = 11/86 (12%)
Query: 527 GPERYPADRYPPGIDRYPPSVDRYPPGIDRYPSV-IDRFPPGGDRYPPGIDRYPPGADRY 585
GP YP + P YPP+ YPP YP +PP YPP PP + Y
Sbjct: 168 GPSLYPQVQQYPQPSGYPPA-SGYPPQPSAYPPPSTSGYPPIPSAYPP-----PPPSSAY 221
Query: 586 PAGIDRYPSNVDRYPGSLDRYPSRYP 611
P YP YP YP +YP
Sbjct: 222 PP--QPYPPQPSYYPQG--PYPGQYP 243
>At1g05470.1 68414.m00556 endonuclease/exonuclease/phosphatase
family protein simlar to inositol polyphosphate
5-phosphatase I (GI:10444261) and II (GI:10444263)
[Arabidopsis thaliana]; contains Pfam profile PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 585
Score = 37.1 bits (82), Expect = 0.082
Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
Query: 545 PSVDRYPPGIDRYPSVIDR--FPPGGDRYPPGIDRYPPGADRYPAGIDRYPSNVDRYPGS 602
PS+ + PG+DR SV DR F + P R + R P+ R PS+ R P
Sbjct: 184 PSIPQ--PGLDRRFSVCDRVFFSHRPSDFDPSF-RGSSSSHR-PSDYSRRPSDYSRRPSD 239
Query: 603 LDRYPSRYPASNGERFPLDGGRYPTYDPVPNDLGR 637
R PS Y + P D R Y P+D R
Sbjct: 240 YSRRPSDYSRRPSDSRPSDYSRPSDYYSRPSDYSR 274
>At3g49840.1 68416.m05449 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 606
Score = 36.7 bits (81), Expect = 0.11
Identities = 34/101 (33%), Positives = 43/101 (42%), Gaps = 21/101 (20%)
Query: 532 PADRYPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPAGIDR 591
P YPP + YPP+ YPP YP ++P G YPP YPP Y G
Sbjct: 496 PPQGYPPK-EGYPPA--GYPPPAG-YPP--PQYPQAG--YPPA--GYPPPQQGYGQG--- 542
Query: 592 YPSNVDRYPGSLDRYPSRYPASNGERFPLDGGRYPTYDPVP 632
YP+ YP P +YP + ++P G P Y P
Sbjct: 543 YPAQ--GYP------PPQYPQGHPPQYPYQGPPPPHYGQAP 575
>At4g20440.2 68417.m02983 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|Q05856 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Drosophila melanogaster}
Length = 257
Score = 35.5 bits (78), Expect = 0.25
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 756 PDRGVRPGPDRFPAEPRPSFGIRRPIERPNG-YRGTYPQP-GLERP 799
P G+RP P +F P P +G R I P G RG P P G++ P
Sbjct: 184 PPYGMRPPPQQFSGPPPPQYGQRPMIPPPGGMMRGPPPPPHGMQGP 229
>At4g20440.1 68417.m02982 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|Q05856 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Drosophila melanogaster}
Length = 257
Score = 35.5 bits (78), Expect = 0.25
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 756 PDRGVRPGPDRFPAEPRPSFGIRRPIERPNG-YRGTYPQP-GLERP 799
P G+RP P +F P P +G R I P G RG P P G++ P
Sbjct: 184 PPYGMRPPPQQFSGPPPPQYGQRPMIPPPGGMMRGPPPPPHGMQGP 229
>At3g53160.1 68416.m05858 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 490
Score = 35.5 bits (78), Expect = 0.25
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 1250 GAVYKVSYEEAAVDKYLKDEVETPSHVRKMIEVFDNRNELLEENGSSDSS 1299
GA+ AVD+ + D E RK+ E+ D N+ LE+ GSSDS+
Sbjct: 425 GAMVSRECVRKAVDELMGDSEEAEERRRKVTELSDLANKALEKGGSSDSN 474
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 35.1 bits (77), Expect = 0.33
Identities = 33/118 (27%), Positives = 47/118 (39%), Gaps = 12/118 (10%)
Query: 552 PGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPAGIDRYPSNVDRYPGSL----DRYP 607
PG +PS + GG R PP PPG ++ AG +PS+ PG +P
Sbjct: 223 PGGGSFPSSPSQIHSGGGRSPP--LPLPPG--QFTAGNASFPSSTQPPPGQYMAGNASFP 278
Query: 608 SRYPASNGERFPLDGGRYPTYDPVPNDLGRYPAADRYPISRYP-IDVYPDRYPTNRYP 664
S P G+ G P P G+YPA + + P + + P +Y P
Sbjct: 279 SSTPPPPGQYM---AGNAPFSSSTPLPPGQYPAVNAQLSTSAPSVPLPPGQYTAVNAP 333
>At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3)
family protein low similarity to Translation initiation
factor IF-3 from [subsp. Schizaphis graminum] {Buchnera
aphidicola} SP|P46243, {Salmonella typhimurium}
SP|P33321; contains Pfam profiles PF05198: Translation
initiation factor IF-3 N-terminal domain, PF00707:
Translation initiation factor IF-3 C-terminal domain
Length = 520
Score = 35.1 bits (77), Expect = 0.33
Identities = 35/124 (28%), Positives = 52/124 (41%), Gaps = 7/124 (5%)
Query: 605 RYPSRY-PASNGERFPLDGGRYPTYDPVPNDLGRY-PAADRYPISRYPIDVYPDRYPTNR 662
R SR+ P S + R+ P GR+ P + P S P +P++ PT R
Sbjct: 330 RDASRFEPQSPNQHVNPQRPRFSNQAPNQQPTGRFDPQSPNQPPSA-PRPQFPNQQPTGR 388
Query: 663 YPERFPVRGRYPSRPGWYSNQYS-DRFDQDRYSGSDWGRYPYSRYP-IGVNRDPVPLGGD 720
+ +FP + P P NQ S RF+ + P SR+P N+ P +
Sbjct: 389 FDPQFPSQPPRPQFPNQAPNQQSTGRFNPQ--FPNQRPSPPQSRFPDQAPNQQPSGPSPN 446
Query: 721 RYPD 724
R+PD
Sbjct: 447 RHPD 450
Score = 35.1 bits (77), Expect = 0.33
Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 28/154 (18%)
Query: 528 PERYPADRYPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPA 587
P + P R+ P PPS R P ++ P G R+ P PP ++P
Sbjct: 356 PNQQPTGRFDPQSPNQPPSAPR--------PQFPNQQPTG--RFDPQFPSQPP-RPQFPN 404
Query: 588 GIDRYPSNVDRYPGSLDRYPSRYPASNGERFPLDGGRYPTYDPVPNDLGRYPAADRYPIS 647
S P ++P++ P+ RFP D PN P+ +R+P
Sbjct: 405 QAPNQQSTGRFNP----QFPNQRPSPPQSRFP---------DQAPNQQPSGPSPNRHPDR 451
Query: 648 RYPIDVY----PDRYPTNRYPERFPVRGRYPSRP 677
+ P + P++ PT R+ + P R P RP
Sbjct: 452 QGPPPRFQNQAPNQQPTGRFEPQPPNPPRAPPRP 485
>At1g31750.1 68414.m03895 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 176
Score = 35.1 bits (77), Expect = 0.33
Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Query: 531 YPADRYPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPAG 588
YP YPP P YPP YP +PP YPP YPP P+G
Sbjct: 24 YPPGAYPPPPQGAYPPPGGYPP--QGYPPPPHGYPPAA--YPPPPGAYPPAGYPGPSG 77
Score = 34.3 bits (75), Expect = 0.58
Identities = 27/66 (40%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 536 YPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPAGIDRYPSN 595
YPPG PP PPG YP +PP YPP PPGA PAG YP
Sbjct: 24 YPPGAYPPPPQGAYPPPG--GYPP--QGYPPPPHGYPPAAYPPPPGA-YPPAG---YPGP 75
Query: 596 VDRYPG 601
PG
Sbjct: 76 SGPRPG 81
>At4g15180.1 68417.m02328 SET domain-containing protein contains
Pfam profile PF00856: SET domain
Length = 2326
Score = 34.7 bits (76), Expect = 0.44
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 633 NDLGRYPAADRYPISRYPID-VYPDRYPT-NRYPERFPVRGRYPSRPGWYSNQYSDRFDQ 690
+D R +D Y S++ + +Y D YP+ N E++P + + S P + +SD+
Sbjct: 369 DDCSRSLHSDHY--SQHSAERLYRDSYPSKNSSLEKYPRKHQDASFP---AKAFSDKHGH 423
Query: 691 DRYSGSDWGRYPYSRYPIGVNRDPVPLGGDRYPDMYDK 728
S SDW + SRY NRD P +R P +++K
Sbjct: 424 SP-SRSDWSPHDRSRY--HENRDRSPYARERSPYIFEK 458
>At4g19590.1 68417.m02879 DNAJ heat shock N-terminal
domain-containing protein protein YJL162c, Saccharomyces
cerevisiae, PIR2:S56945; contains Pfam PF00226: DnaJ
domain;
Length = 345
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 526 VGPERYPADRYPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRY 585
V P+R + PP + PP+ + P + P + PP R PP + P +
Sbjct: 125 VKPKRSRKQKQPP---KKPPNQPKQQPNQQKQPPDQQKQPPNQPRQPPNQQKQPQNEPKQ 181
Query: 586 PAGIDRYPSN 595
P + P N
Sbjct: 182 PPNQPKQPPN 191
Score = 32.3 bits (70), Expect = 2.3
Identities = 13/50 (26%), Positives = 21/50 (42%)
Query: 566 PGGDRYPPGIDRYPPGADRYPAGIDRYPSNVDRYPGSLDRYPSRYPASNG 615
P + PP + PP R P + P N + P + + P ++NG
Sbjct: 148 PNQQKQPPDQQKQPPNQPRQPPNQQKQPQNEPKQPPNQPKQPPNQASTNG 197
>At1g51580.1 68414.m05806 KH domain-containing protein
Length = 621
Score = 33.5 bits (73), Expect = 1.0
Identities = 27/73 (36%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 526 VGPERYPADRYPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYP-PGIDRYPPGADR 584
+GP YP P G +YP S DRY + + PG DR P PG DR P
Sbjct: 454 MGP--YPEPPPPFGPRQYPASPDRYHSPVGPFHE-RHCHGPGFDRPPGPGFDRPPSPMSW 510
Query: 585 YP-AGIDRYPSNV 596
P GID +P +
Sbjct: 511 TPQPGIDGHPGGM 523
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 33.1 bits (72), Expect = 1.3
Identities = 41/153 (26%), Positives = 52/153 (33%), Gaps = 11/153 (7%)
Query: 528 PERYPADRYPPGIDRYPPSVDRYPPGIDR-YPSVIDRFPPGGDRYPPGIDRYPPGADRYP 586
P P YPP PPS YPP P + P PP YPP A P
Sbjct: 675 PPPPPPVYYPPVTQSPPPSPVYYPPVTQSPPPPPVYYLPVTQSPPPPSPVYYPPVAKSPP 734
Query: 587 AGIDRYPSNVDRYPGSLDRYPSRYPASNGERFPLDGGRYPTY-DPVPNDLGRYPAADRYP 645
Y V + P +P ++ + P P Y P P P+ D +
Sbjct: 735 PPSPVYYPPVTQSPPPPSTPVEYHPPASPNQSP-----PPEYQSPPPKGCNDSPSNDHHY 789
Query: 646 ISRYPIDVYPDRYPTNRYPERFPVRG-RYPSRP 677
+ P + P Y P P+RG Y S P
Sbjct: 790 QTPTPPSLPPPYYEDTPLP---PIRGVSYASPP 819
Score = 31.5 bits (68), Expect = 4.1
Identities = 23/83 (27%), Positives = 29/83 (34%), Gaps = 3/83 (3%)
Query: 532 PADRYPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRY---PPGADRYPAG 588
P+ P + YPP PP P I PP PP Y PP + P
Sbjct: 516 PSSEMSPSVRAYPPPPPLSPPPPSPPPPYIYSSPPPPSPSPPPPYIYSSPPPVVNCPPTT 575
Query: 589 IDRYPSNVDRYPGSLDRYPSRYP 611
P ++ P + YPS P
Sbjct: 576 QSPPPPKYEQTPSPREYYPSPSP 598
>At1g60650.2 68414.m06828 glycine-rich RNA-binding protein, putative
similar to RNA binding protein(RZ-1) GI:1435061 from
[Nicotiana sylvestris]; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 292
Score = 33.1 bits (72), Expect = 1.3
Identities = 39/119 (32%), Positives = 47/119 (39%), Gaps = 8/119 (6%)
Query: 569 DRYPPGIDRYPPGADRYPAGIDRYPSNVDRYPGSLDRYPSRYPASNGERFPLDGGRYPTY 628
DRY G R RY DR+ S D+Y D YP A G+RF D P +
Sbjct: 176 DRYMDG--RRDRDGGRYSYR-DRFDSG-DKYEPR-DHYPFERYAPPGDRFVSDRYGMPEH 230
Query: 629 DPVPNDLGRYPAADRYPISRYPIDVYPDRYPTNRYPERFPVR-GRY--PSRPGWYSNQY 684
GR + DR +R D Y D P + R G Y PSRPG + Y
Sbjct: 231 HLENEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSY 289
>At1g60650.1 68414.m06827 glycine-rich RNA-binding protein, putative
similar to RNA binding protein(RZ-1) GI:1435061 from
[Nicotiana sylvestris]; contains InterPro entry
IPR000504: RNA-binding region RNP-1 (RNA recognition
motif) (RRM)
Length = 292
Score = 33.1 bits (72), Expect = 1.3
Identities = 39/119 (32%), Positives = 47/119 (39%), Gaps = 8/119 (6%)
Query: 569 DRYPPGIDRYPPGADRYPAGIDRYPSNVDRYPGSLDRYPSRYPASNGERFPLDGGRYPTY 628
DRY G R RY DR+ S D+Y D YP A G+RF D P +
Sbjct: 176 DRYMDG--RRDRDGGRYSYR-DRFDSG-DKYEPR-DHYPFERYAPPGDRFVSDRYGMPEH 230
Query: 629 DPVPNDLGRYPAADRYPISRYPIDVYPDRYPTNRYPERFPVR-GRY--PSRPGWYSNQY 684
GR + DR +R D Y D P + R G Y PSRPG + Y
Sbjct: 231 HLENEYRGRERSYDRDRYARDTSDRYGDMGPIRDEGRPYRSRPGPYDRPSRPGGRPSSY 289
>At5g11880.1 68418.m01390 diaminopimelate decarboxylase, putative /
DAP carboxylase, putative similar to diaminopimelate
decarboxylase [Arabidopsis thaliana] GI:6562332; contains
Pfam profiles PF02784: Pyridoxal-dependent decarboxylase
pyridoxal binding domain, PF00278: Pyridoxal-dependent
decarboxylase C-terminal sheet domain
Length = 489
Score = 32.7 bits (71), Expect = 1.8
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
Query: 1087 SKVRLMILYQGRPTTTIAVGDPLTFR---LEAQDGY--NYATDIFATNVIARDPYSGRSV 1141
+++RL +L PT I G+ + L AQ+G N ++ N++ SG+ V
Sbjct: 154 NELRLALLAGFDPTKCIFNGNGKSLEDLVLAAQEGVFVNVDSEFDLNNIVEASRISGKQV 213
Query: 1142 QLIDRVGCPVDPDVFPELDKGRNGDSLEAR 1171
++ R+ VDP V P + G R
Sbjct: 214 NVLLRINPDVDPQVHPYVATGNKNSKFGIR 243
>At4g28300.2 68417.m04053 hydroxyproline-rich glycoprotein family
protein
Length = 438
Score = 32.7 bits (71), Expect = 1.8
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 572 PPGIDRYPPGADRY--PAGIDRYPSNVDRYPGSLDRYPSRYPASNGERFPLDGGRYPTYD 629
PP + PP ++ P +PS+ S +Y +P R P G YPTY
Sbjct: 201 PPSQLQAPPAQSQFMPPPPAPSHPSSAQTQ--SFPQYQQNWPPQPQAR-PQSSGGYPTYS 257
Query: 630 PVPNDLGRYPAADRYPIS 647
P P G P + P S
Sbjct: 258 PAPP--GNQPPVESLPSS 273
>At4g28300.1 68417.m04052 hydroxyproline-rich glycoprotein family
protein
Length = 496
Score = 32.7 bits (71), Expect = 1.8
Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 572 PPGIDRYPPGADRY--PAGIDRYPSNVDRYPGSLDRYPSRYPASNGERFPLDGGRYPTYD 629
PP + PP ++ P +PS+ S +Y +P R P G YPTY
Sbjct: 259 PPSQLQAPPAQSQFMPPPPAPSHPSSAQTQ--SFPQYQQNWPPQPQAR-PQSSGGYPTYS 315
Query: 630 PVPNDLGRYPAADRYPIS 647
P P G P + P S
Sbjct: 316 PAPP--GNQPPVESLPSS 331
>At3g20850.1 68416.m02636 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 134
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 532 PADRYPPGIDRY-PPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGA 582
PAD PP Y PP D PP Y D PP YPP + PP A
Sbjct: 51 PADLPPPPTPVYSPPPADLPPPPTPYYSPPAD-LPPPTPIYPPPVAFPPPQA 101
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 32.3 bits (70), Expect = 2.3
Identities = 32/111 (28%), Positives = 38/111 (34%), Gaps = 5/111 (4%)
Query: 528 PERYPADRYPP-GIDRYPPSVDRYPPGIDR-YPSVIDRF-PPGGDRYPPGIDRYPPGADR 584
P PAD PP + PP+V PP + P +D PP D PP PP D
Sbjct: 38 PPSPPADSSPPPALPSLPPAVFSPPPTVSSPPPPPLDSSPPPPPDLTPP--PSSPPPPDA 95
Query: 585 YPAGIDRYPSNVDRYPGSLDRYPSRYPASNGERFPLDGGRYPTYDPVPNDL 635
P +P +D P P P D P P P L
Sbjct: 96 PPPIPIVFPPPIDSPPPESTNSPPPPEVFEPPPPPADEDESPPAPPPPEQL 146
>At1g09070.1 68414.m01012 C2 domain-containing protein / src2-like
protein, putative similar to cold-regulated gene SRC2
[Glycine max] GI:2055230; contains Pfam profile PF00168:
C2 domain; identical to cDNA src2-like protein
GI:3426059
Length = 324
Score = 32.3 bits (70), Expect = 2.3
Identities = 27/85 (31%), Positives = 30/85 (35%), Gaps = 8/85 (9%)
Query: 528 PERYPADRYPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPA 587
P YPA P P D G+ YP +P G YP PPGA
Sbjct: 173 PSAYPAPPAGPSSGYPPQGHDDKHDGVYGYPQQAG-YPAGTGGYP------PPGAYPQQG 225
Query: 588 GIDRY-PSNVDRYPGSLDRYPSRYP 611
G Y P YPG + P YP
Sbjct: 226 GYPGYPPQQQGGYPGYPPQGPYGYP 250
>At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing
protein
Length = 809
Score = 31.9 bits (69), Expect = 3.1
Identities = 55/195 (28%), Positives = 72/195 (36%), Gaps = 24/195 (12%)
Query: 530 RYPADRYPPG-IDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPAG 588
R P YP + R D PP R P+V +R+ D YPP Y +
Sbjct: 580 RPPVPLYPKASLKRDYDRRDELPPPRSR-PAVSYSSRLSPERHLSYRDDYPPRGSGY-SD 637
Query: 589 IDRYPSNVD-RYPGSLDRYPSRYPASNGERFP-LDGGRYPTYDPVPNDLGRYPAAD---- 642
+ R S + R P D Y R+ ER P GR Y+P+P Y A D
Sbjct: 638 LPRSSSRSEIRRPFVDDLYSPRF-----ERPPSYSEGRPRAYEPLPGSKRPYAALDDLPP 692
Query: 643 -------RYPISRYPIDVYPDRYPTNRYPERFPVRG-RYPSRPGWYSNQYSDRFDQDRYS 694
R+ R DV P +Y + Y +R P Y S SN + R
Sbjct: 693 RYADVDVRHSRPRLDYDVGPSQYGES-YGDRIPRSSLGYGSSRNSMSN-HDSRGPYSSRQ 750
Query: 695 GSDWGRYPYSRYPIG 709
G D+G YS +G
Sbjct: 751 GMDYGGGSYSGSDVG 765
>At2g41420.1 68415.m05111 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 98
Score = 31.9 bits (69), Expect = 3.1
Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Query: 528 PERYPADRYPPGIDRYPPS---VDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPP 580
PE YP D YPP YPP YPP YP +P G PP +YPP
Sbjct: 19 PEGYPKDAYPP--QGYPPQGYPQQGYPP--QGYPQ--QGYPQQG-YPPPYAPQYPP 67
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 639 PAADRYPISRYPIDVYPDR-YPTNRYPER-FPVRGRYPSR 676
P YP YP D YP + YP YP++ +P +G YP +
Sbjct: 12 PPPQGYPPEGYPKDAYPPQGYPPQGYPQQGYPPQG-YPQQ 50
>At4g10020.1 68417.m01639 short-chain dehydrogenase/reductase (SDR)
family protein similar to sterol-binding dehydrogenase
steroleosin GI:15824408 from [Sesamum indicum]
Length = 389
Score = 31.5 bits (68), Expect = 4.1
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 567 GGDRYPPGIDRYPPGADRYPAGIDRYPSNVDRYPGSLDRY 606
G R P RY Y A RYP++ RYP S R+
Sbjct: 342 GPPRVPASPPRYTASPPHYTASPPRYPASPPRYPASPPRF 381
Score = 31.5 bits (68), Expect = 4.1
Identities = 15/38 (39%), Positives = 18/38 (47%)
Query: 574 GIDRYPPGADRYPAGIDRYPSNVDRYPGSLDRYPSRYP 611
G R P RY A Y ++ RYP S RYP+ P
Sbjct: 342 GPPRVPASPPRYTASPPHYTASPPRYPASPPRYPASPP 379
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 527 GPERYPAD--RYPPGIDRYPPSVDRYPPGIDRYPSVIDRF 564
GP R PA RY Y S RYP RYP+ RF
Sbjct: 342 GPPRVPASPPRYTASPPHYTASPPRYPASPPRYPASPPRF 381
>At2g42010.1 68415.m05197 phospholipase D beta 1 / PLD beta 1
(PLDBETA1) identical to SP|P93733 Phospholipase D beta 1
(EC 3.1.4.4) (AtPLDbeta1) (PLD beta 1) (PLDbeta)
{Arabidopsis thaliana}; contains Pfam profiles: PF00614
phospholipase D.active site motif, PF00168 C2 domain
Length = 1083
Score = 31.5 bits (68), Expect = 4.1
Identities = 35/145 (24%), Positives = 49/145 (33%), Gaps = 14/145 (9%)
Query: 528 PERYPADRYPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPA 587
P YPA PP + YPP P ++Y + +PP PP PP ++ +
Sbjct: 18 PYPYPAPYRPPSSEPYPP------PPTNQYSAPYYPYPPPPYATPPPY-ASPPPPHQHTS 70
Query: 588 GIDRYPSNVDR--YPGSLDRYPSRYPASNGERFP-----LDGGRYPTYDPVPNDLGRYPA 640
G P + P SL P Y + + P G + Y P P
Sbjct: 71 GSHSGPLDYSHNPQPSSLAAAPPEYHRHSFDYQPSPYPYQPQGNFGAYGPPPPHYSYQEP 130
Query: 641 ADRYPISRYPIDVYPDRYPTNRYPE 665
A P P + P T + E
Sbjct: 131 AQYPPPETKPQEPLPPPQQTQGFQE 155
>At5g47010.1 68418.m05794 RNA helicase, putative similar to type 1 RNA
helicase pNORF1 [Homo sapiens] GI:1885356
Length = 1254
Score = 31.1 bits (67), Expect = 5.4
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Query: 604 DRYPSRYPASN--GERFPLDGGRYPTYDPVPNDLGRYPAADRYPISRYPIDVYPDRYPTN 661
D + S P ++ G R G P+ P G +PA YPI R P+ +P P+
Sbjct: 957 DNFGSGNPNADRRGSRGRAGGSYLPSGPPNGARPGLHPAG--YPIPRVPLSPFPGGPPSQ 1014
Query: 662 RY--PERFPVRGRYPSRP 677
Y P R PV G P P
Sbjct: 1015 PYAIPTRGPV-GAVPHAP 1031
>At3g42120.1 68416.m04325 hypothetical protein
Length = 409
Score = 31.1 bits (67), Expect = 5.4
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 541 DRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPAGIDRYPSNVDRY 599
DR + + Y ID +++ F G DRY G+ RY G R A +D +D Y
Sbjct: 14 DRAGQAYNEYGQKIDEQGNLLPNFVEGVDRYHQGVARY-QGGYRAAAVVDGCAIQLDDY 71
>At2g35230.2 68415.m04322 VQ motif-containing protein contains
PF05678: VQ motif
Length = 295
Score = 31.1 bits (67), Expect = 5.4
Identities = 61/258 (23%), Positives = 96/258 (37%), Gaps = 37/258 (14%)
Query: 545 PSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPAGIDRYPSNVDR--YPGS 602
P+ ++ PG ++ P + PG ++ P Y PG ++ P P N R PG
Sbjct: 60 PNANQMQPGHEQRPYI-----PGHEQRP-----YVPGNEQQPY----MPGNEQRPYIPGH 105
Query: 603 LDRYPSRYPASNGERFPLDGGRYPTYDPVPNDLGRYPAADRYPISRY--PIDVYPDRYPT 660
R S PA + + P +P R ++Y P + P P
Sbjct: 106 EQR--SYMPAQSQSQSQPQPQPQPQQHMMPGPQPRMNMQGPLQPNQYLPPPGLVPSPVPH 163
Query: 661 NRYPERF--PVRGRYPSRPGWYSNQYSDRFDQDRYSGSDWGRYPYSRYPIGVNRDPVPLG 718
N RF PV P++P +Q F RY+G + P S++ P P G
Sbjct: 164 NLPSPRFNAPVPVT-PTQPSPMFSQMYGGFPSPRYNGFGPLQSPTSQF-----LQPSPTG 217
Query: 719 GDRYPDMYDKXXXXXXXXXXXXXXXXXXQDFPGADRFPDRGVRPG--PDRFPAEPRPSFG 776
YP+M+ +F + + PG P + P +P PS G
Sbjct: 218 ---YPNMFSPRSPYPLLSPGVQYPQPLTPNFSFSQIAQQGSLGPGAGPSQGPPQPPPSPG 274
Query: 777 IRRPIERPNGYRGTYPQP 794
+ P+ P+G+ +P P
Sbjct: 275 LMFPLS-PSGF---FPMP 288
>At2g35230.1 68415.m04321 VQ motif-containing protein contains
PF05678: VQ motif
Length = 402
Score = 31.1 bits (67), Expect = 5.4
Identities = 61/258 (23%), Positives = 96/258 (37%), Gaps = 37/258 (14%)
Query: 545 PSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPPGADRYPAGIDRYPSNVDR--YPGS 602
P+ ++ PG ++ P + PG ++ P Y PG ++ P P N R PG
Sbjct: 167 PNANQMQPGHEQRPYI-----PGHEQRP-----YVPGNEQQPY----MPGNEQRPYIPGH 212
Query: 603 LDRYPSRYPASNGERFPLDGGRYPTYDPVPNDLGRYPAADRYPISRY--PIDVYPDRYPT 660
R S PA + + P +P R ++Y P + P P
Sbjct: 213 EQR--SYMPAQSQSQSQPQPQPQPQQHMMPGPQPRMNMQGPLQPNQYLPPPGLVPSPVPH 270
Query: 661 NRYPERF--PVRGRYPSRPGWYSNQYSDRFDQDRYSGSDWGRYPYSRYPIGVNRDPVPLG 718
N RF PV P++P +Q F RY+G + P S++ P P G
Sbjct: 271 NLPSPRFNAPVPVT-PTQPSPMFSQMYGGFPSPRYNGFGPLQSPTSQF-----LQPSPTG 324
Query: 719 GDRYPDMYDKXXXXXXXXXXXXXXXXXXQDFPGADRFPDRGVRPG--PDRFPAEPRPSFG 776
YP+M+ +F + + PG P + P +P PS G
Sbjct: 325 ---YPNMFSPRSPYPLLSPGVQYPQPLTPNFSFSQIAQQGSLGPGAGPSQGPPQPPPSPG 381
Query: 777 IRRPIERPNGYRGTYPQP 794
+ P+ P+G+ +P P
Sbjct: 382 LMFPLS-PSGF---FPMP 395
>At5g48780.1 68418.m06036 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 669
Score = 30.3 bits (65), Expect = 9.5
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Query: 293 LSEEDSVSQKDDVTVSASPTHHFYDLVCLDNLSHRVTARGTEYPDNSV-TSHLFSPGRRP 351
L E S+ + +S T F DLV +++ ++A D V ++ G
Sbjct: 417 LYEYSSIMETFSSQPISSTTRSFEDLVGMNHRMQALSALLELESDKEVRVVGIWGTGGIG 476
Query: 352 DTAFQRYRNSRITGEFHS----EITGRSLSECLDECLRQTSFQCRSAVYSDRARTC 403
T RY RI+ +FH+ E S S CL+E + Q R A+ ++ C
Sbjct: 477 KTTLSRYAYERISQQFHTHAFLENAQESSSSCLEERFLSKAIQ-REALAVRNSKDC 531
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/53 (30%), Positives = 20/53 (37%)
Query: 528 PERYPADRYPPGIDRYPPSVDRYPPGIDRYPSVIDRFPPGGDRYPPGIDRYPP 580
P P PP + PP V PP + P + PP PP + PP
Sbjct: 684 PPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVQSPPP 736
>At3g14390.1 68416.m01820 diaminopimelate decarboxylase, putative /
DAP carboxylase, putative similar to diaminopimelate
decarboxylase [Arabidopsis thaliana] GI:6562332; contains
Pfam profiles PF02784: Pyridoxal-dependent decarboxylase
pyridoxal binding domain, PF00278: Pyridoxal-dependent
decarboxylase C-terminal sheet domain
Length = 484
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 1113 LEAQDGY--NYATDIFATNVIARDPYSGRSVQLIDRVGCPVDPDVFPELDKGRNGDSLEA 1170
L AQ+G N ++ N++ SG+ V ++ R+ VDP V P + G
Sbjct: 178 LAAQEGVFVNVDSEFDLNNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNKNSKFGI 237
Query: 1171 R 1171
R
Sbjct: 238 R 238
>At2g37070.1 68415.m04549 expressed protein
Length = 420
Score = 30.3 bits (65), Expect = 9.5
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 558 PSVIDRFPPGGDRYPPGI-DRYPPGADRYPAGIDRYPSNVDRYPGSLDRYPSRYPASNGE 616
PS ++ P R PGI + A ++P + + +++ R L+R PS S +
Sbjct: 67 PSSEEKMKPNPIRKRPGIRSQGLAKATKHPVASEEHNTSISRPSTGLNR-PSS-GLSKTK 124
Query: 617 RFPLDGGRYPTYDPVPNDLGRYPAADRYPISRYP 650
R +D + + G+ P A R PISR P
Sbjct: 125 RASVDTNKAKQETNPKSSGGKEPLASRVPISRRP 158
>At1g48110.1 68414.m05369 expressed protein contains Pfam profile
PF04146: YT521-B-like family
Length = 639
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 1203 SHTGRSEPSFGRRRRDVNATISFEGNDTVIPKSEDANKTVDKPDNNEG 1250
++ GRS+ G R+R AT + ND +P K +KP N G
Sbjct: 140 ANRGRSDGR-GSRQRSGTATAGLQRNDPKLPAGNSLGKISEKPRPNSG 186
>At1g12810.1 68414.m01488 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 129
Score = 30.3 bits (65), Expect = 9.5
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 642 DRYPISRYPIDVYPDRYPTNRYPERFPVRGRYPSRP 677
DR P YP Y YP YP P G YPS P
Sbjct: 4 DRVPPESYPPPGYQSHYPPPGYPSAPPPPG-YPSPP 38
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.138 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,975,823
Number of Sequences: 28952
Number of extensions: 1530492
Number of successful extensions: 3416
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 3146
Number of HSP's gapped (non-prelim): 155
length of query: 1386
length of database: 12,070,560
effective HSP length: 90
effective length of query: 1296
effective length of database: 9,464,880
effective search space: 12266484480
effective search space used: 12266484480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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