Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001895-TA|BGIBMGA001895-PA|undefined
(641 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 36 0.023
SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schi... 30 0.86
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 29 1.5
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 29 2.0
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 29 2.0
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 29 2.0
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 29 2.6
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 2.6
SPAC9.08c |||steroid reductase |Schizosaccharomyces pombe|chr 1|... 28 3.5
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 28 3.5
SPCC1840.03 |sal3|pse1|karyopherin Sal3|Schizosaccharomyces pomb... 28 4.6
SPAC57A7.04c |pabp||mRNA export shuttling protein |Schizosacchar... 28 4.6
SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase Ppk30|Schizos... 27 6.1
SPBC36.10 |||mitochondrial intermembrane space protein sorting p... 27 6.1
SPAC806.08c |mod21||gamma tubulin complex subunit Mod21|Schizosa... 27 6.1
SPBC15D4.05 |||conserved protein|Schizosaccharomyces pombe|chr 2... 27 6.1
SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor Mc... 27 6.1
SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1 |Schizosacch... 27 8.0
SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces pom... 27 8.0
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 35.5 bits (78), Expect = 0.023
Identities = 41/227 (18%), Positives = 84/227 (37%)
Query: 142 GQREQGSRASSPDMDFLEMDFDPGPSCEMDTGDESIPDAEIEAASNMPEENEPVMMSPSP 201
G S +SS + + D D S + S D++ ++S+ E S S
Sbjct: 106 GSSSDESDSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSS 165
Query: 202 ENVSAPRANSVNLPSASSHNDLEAYSHDIPSTSNDNTGQGDVVESTSLYGPYIMQSNARG 261
+ S+ + S + + SS + ++ S S+ ++ D +S G S++
Sbjct: 166 SSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSS 225
Query: 262 EELLVRRTMSLWPTSGLACHHATTGDLVCLSEMLNSDEEEYPDGILYEYHKGHSRRVDPN 321
E +S + +++ D S +S+ E + S +
Sbjct: 226 ESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSS 285
Query: 322 NLSSVYHLKIAKNSTGEKTKPDSDSHIPTKENDTTEQATTSSNVCAE 368
+ S +++S + DSDS +++ ++ TTS V A+
Sbjct: 286 DSSDSESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTSGEVSAQ 332
Score = 33.5 bits (73), Expect = 0.092
Identities = 48/242 (19%), Positives = 89/242 (36%), Gaps = 17/242 (7%)
Query: 7 KDVISSKKVYDNGVELNQDVLSCQKHKICQDLAANSPNVPSTSGINRVNEPDSNCRESRK 66
+DV KK ++ + N D K + A +S + + ++ S+ ES
Sbjct: 64 EDVGKHKKTKESLEKSNDDSQKISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESESSS 123
Query: 67 RPSSLKLNRPNFDADDSSSDTGNDDYSLGSEDGCIYTYRGGEHLADLPSSFFSLDMGXXX 126
+ + + +++ SS D+ + S SE +D SS S +
Sbjct: 124 EDNDSSSSSSDSESESSSEDSDSSSSSSDSES------ESSSEGSDSSSSSSSSESESSS 177
Query: 127 XXXXXXXXXXXVPQQGQREQGSRASSPDMDFLEMDFDPGPSCEMDTGDESIPDAEIEAAS 186
+ S +SS D D D + D S + E+ S
Sbjct: 178 EDNDSSSSSS--------DSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESES 229
Query: 187 NMPEENEPVMMSPSPENVSAPRANSVNLPSASSHNDLEAYSHDIPSTSNDNTGQGDVVES 246
+ E+N+ S S ++ S + + S+SS ++ E+ S D S+SN + + D
Sbjct: 230 S-SEDND--SSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSD 286
Query: 247 TS 248
+S
Sbjct: 287 SS 288
Score = 30.7 bits (66), Expect = 0.65
Identities = 47/239 (19%), Positives = 88/239 (36%), Gaps = 17/239 (7%)
Query: 5 NDKDVISSKKVYDNGVELNQDVLSCQKHKICQDLAANSPNVPSTSGINRVNEPDSNCRES 64
ND SS ++ E + D S + + S + S+S + + N S
Sbjct: 126 NDSSSSSSDSESESSSE-DSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSS 184
Query: 65 RKRPSSLKLNRPNFDADDSSSDTGNDDYSLGSEDGCIYTYRGGEHLA-DLPSSFFSLDMG 123
S + + + D+ SSSD+ ++ S GS+ + E + D SS S D
Sbjct: 185 SSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSE 244
Query: 124 XXXXXXXXXXXXXXVPQQGQREQGSRASSPDMDFLEMDFDPGPSCEMDTGDESIPDAEIE 183
+ S +SS D D S D+ D+S D+
Sbjct: 245 SESSSEDSDS------SSSSSDSESESSSKDSD--------SSSNSSDSEDDSSSDSSDS 290
Query: 184 AASNMPEENEPVMMSPSPENVSAPRANSVNLPSASSHNDLEAYSHDIPSTSNDNTGQGD 242
+ + E+++ S ++ S+ + N + +S ++ A S ++S ++T D
Sbjct: 291 ESESSSEDSDSTSSSSDSDSSSSSEDGNSNTDTTTS-GEVSAQSSTNSTSSEESTSVKD 348
>SPCC576.13 |swc5||chromatin remodeling complex subunit
Swc5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 30.3 bits (65), Expect = 0.86
Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Query: 159 EMDFDPGPSCEMDTGDESIPDAEIEAASNMPEENEPVMMSPSPENVSAPRANSVNLPSAS 218
+ +F PG S + ++ S DA+ + EE E + + ++ + V L + +
Sbjct: 16 DTEFVPGDSTDTES---SFSDAD-SSEEEFVEEKEASQVQSTKSKIATSESEDVTLKNIA 71
Query: 219 SHNDLEAYSHDIPSTSNDNTGQGDVVESTS 248
N E IP SN++ V+ST+
Sbjct: 72 KKNKRERNDKLIPQQSNESEAIEKPVQSTT 101
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 38 LAANSPNVPSTSGINRVNEPDSNCRESRKRPSSLKLNRPNFDADDSSSDTGNDDYSLGSE 97
+++ P P + + D+ + SR PS + P++ SSS N S SE
Sbjct: 137 MSSTGPQTPINGELKSNDSQDTAFQSSRNMPSDTSVASPDYSHSQSSSPIANYQESGNSE 196
Query: 98 D 98
+
Sbjct: 197 E 197
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 29.1 bits (62), Expect = 2.0
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 186 SNMPEENEPVM-MSPSPENVSAPRANSVNLPSAS--SHNDLEAYSHDIPSTSN 235
SN+P +N P + PSP ++ P N +NLP+AS S + L +IP+ +N
Sbjct: 337 SNLPSQNAPARPVEPSP-SIQPP--NLLNLPTASPESTSWLPGSQTNIPANTN 386
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 150 ASSPDMDFLEMDFDPGPSCEMDTGDESIPDAEIEAASNMPEENEPVMMSPSPENVSAPRA 209
ASSP ++ +P +++ DE+ P A A S EE EP +S +++SA
Sbjct: 499 ASSPVTFSEDVKKEPSEEKKLEVSDEA-PKAAPLAESKKVEEKEPFYVSKDKKDISAVNL 557
Query: 210 NSVN 213
+N
Sbjct: 558 ADLN 561
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 173 GDESIPDAEIEAASNMPEENEPVMMSPSPENVSAPRANSVNLPSASSHNDLEAYSHDIP 231
GD++IPD AS P+ ++P P S +N P S + AYS P
Sbjct: 263 GDDNIPDLPKRPASIAPQPTGASTIAPQPTGTSPSPPVEMNFPDTS--DITPAYSEPEP 319
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/75 (24%), Positives = 28/75 (37%)
Query: 323 LSSVYHLKIAKNSTGEKTKPDSDSHIPTKENDTTEQATTSSNVCAELPRCMVWSEREACE 382
L S + K +STG T + T D T A+ SS+ + P+ + +
Sbjct: 804 LLSEFSKKDTASSTGADTPLSRSQSVITSSTDVTSSASRSSDTVSNYPKATIKGTGRIRK 863
Query: 383 RQVTQIGTSACGATA 397
R + A G A
Sbjct: 864 RLTDEDNVKATGQAA 878
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
Query: 172 TGDESIPDAEIEAASNMPEENEPVMMSPSPENVSAPRANSVNLPSASSHNDLEAYSHDIP 231
T ++S P + + S P E +PSP+ P LPS S N Y D P
Sbjct: 473 TTNDSSPPKDSSSTSTQPTEQSNAQQAPSPKEEERP------LPSEPSQNQPAEY-RDTP 525
Query: 232 ST 233
T
Sbjct: 526 DT 527
>SPAC9.08c |||steroid reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 282
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 302 YPDGILYEYHKGHSRRVDPNNLSSV 326
Y D ILY+ + +++ DP+NL +V
Sbjct: 173 YHDNILYDLRRSSNKKKDPDNLDTV 197
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 28.3 bits (60), Expect = 3.5
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 480 WISLGAIPILTLNLQMGCQGDLPDAWHHQMVFGVSPRGVYLCNPVECVREHVLWARLVS- 538
W ++GA+ + + LQM + +Q V +P GV L P C + L A+ V+
Sbjct: 491 WNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGK--TLLAKAVAN 548
Query: 539 ---PSVLLVRSRDILSRYTPDTD 558
+ + +R ++L++Y +++
Sbjct: 549 ESKANFISIRGPELLNKYVGESE 571
>SPCC1840.03 |sal3|pse1|karyopherin Sal3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1095
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 178 PDAEIEAASNMPEENEPVMMSPSPENVSAPRANSVNLPSASSHNDLEAYSHDI 230
PD +++ S + E PV+ SP + A VN + + LE Y DI
Sbjct: 445 PDMQVKYPSRILEALVPVLESPESRVQAHAAAAMVNFSEEADNKVLEPYLDDI 497
>SPAC57A7.04c |pabp||mRNA export shuttling protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 653
Score = 27.9 bits (59), Expect = 4.6
Identities = 23/92 (25%), Positives = 41/92 (44%), Gaps = 11/92 (11%)
Query: 153 PDMDFLEMDFDPGPSCEMDTGDESIPDAEIEAASNMPE-ENEPVMMSPSPENVSAP---- 207
P D L+ D +++T +E++ + E +SN P E +P + PE + P
Sbjct: 2 PSTD-LKKQADAAVESDVNTNNEAVESSTKEESSNTPSTETQPEKKAEEPEAAAEPSEST 60
Query: 208 ----RANSVNLPSASSHNDLEAYSHDI-PSTS 234
A+SV PS ++ Y ++ PS +
Sbjct: 61 STPTNASSVATPSGTAPTSASLYVGELDPSVT 92
>SPBC6B1.02 |ppk30||Ark1/Prk1 family protein kinase
Ppk30|Schizosaccharomyces pombe|chr 2|||Manual
Length = 953
Score = 27.5 bits (58), Expect = 6.1
Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 185 ASNMPEENEPVMMSPSPENVSAPRANSVNLPSASSHNDLEA 225
+SN+P N P + S SP +VS +N ++ P +S++ND+ A
Sbjct: 383 SSNVPPVNRPSLKSKSP-SVSNILSNQLS-PISSANNDVMA 421
>SPBC36.10 |||mitochondrial intermembrane space protein sorting
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 27.5 bits (58), Expect = 6.1
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 553 YTPDTDLTPLMFVPDRRFHTYNVFGQVVNLIREWRAAGWVERSTR 597
Y+P +L +F + R ++ NLI +W G+ ++++R
Sbjct: 111 YSPHPELEATVFQQEARIEALACMKRLSNLIEQWSVDGFGKKASR 155
>SPAC806.08c |mod21||gamma tubulin complex subunit
Mod21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 618
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 22 LNQDVLSCQKHKICQDLAANSPNVPSTSGINRVNEP 57
LN+++L+CQK ++ D+ N+ + + SGI N+P
Sbjct: 541 LNEELLNCQKQEL-PDVMENTYQISTVSGIK--NDP 573
>SPBC15D4.05 |||conserved protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 411
Score = 27.5 bits (58), Expect = 6.1
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 179 DAEIEAASNMPEENEPVMMSPSPENVSAPRANSVNLPSASSHNDLEAYSHDIPSTSNDNT 238
D EIE S +P+ + E + P + ++++P+ SS+ND++++ D+
Sbjct: 2 DFEIENESEIPQ------LVDVEEVNTQPHSETLSVPTVSSNNDIDSFEQQSDFLLVDHD 55
Query: 239 GQGDVVESTSLYG 251
D V T L G
Sbjct: 56 STLDPVPVTILTG 68
>SPAPB1E7.02c |mcl1|slr3|DNA polymerase alpha accessory factor
Mcl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 27.5 bits (58), Expect = 6.1
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 36 QDLAANSPNVPSTSGINRVNEPDSNCRESRKRPSSLKLNRPNFDADDSSSDTGND-DYSL 94
Q + + P+V S + N+P S+ + + K F +DD S ND D +
Sbjct: 291 QGILYSCPDVIPKSILKEENDPTKPLTSSKSKNRTSKELDDLFGSDDEQSQNVNDLDGNS 350
Query: 95 GSEDGCIYTYRGGEHLADLPSSFFSLD 121
+E+ + G + DL + +D
Sbjct: 351 ANEENEFINHDGLDSSLDLDGDSYMVD 377
>SPAC30D11.03 |drs1||ATP-dependent RNA helicase Drs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 754
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 150 ASSPDMDFLEMDFDPGPSCEMDTGDESIPDAEIEAASNMPEENEPVMMSPSPENVSAPRA 209
+S+ DM++ DFD G E + ++ I + + P+++E PS E + P
Sbjct: 108 SSATDMNW---DFDMGSKTESNRASNTVDLDAIISRNRKPDDDEFPSSFPSEEELQEPEQ 164
Query: 210 NSVN 213
+++
Sbjct: 165 ENID 168
>SPAC23D3.06c |nup146||nucleoporin Nup146|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1325
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 180 AEIEAASNMPEEN---EPVMMSPSPENVSAPRANSVNLPSASSHNDLEAYSHDIPSTSND 236
AE + PE N +P +PS +++ A N+PSA D + S +PST
Sbjct: 722 AETQVEQKKPENNVLTKPFSFAPSDKSMFA-----ANIPSAGEGLDQQKTSKALPSTGIT 776
Query: 237 NTGQGD 242
+ D
Sbjct: 777 KLSEND 782
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.130 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,118,280
Number of Sequences: 5004
Number of extensions: 140585
Number of successful extensions: 404
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 388
Number of HSP's gapped (non-prelim): 26
length of query: 641
length of database: 2,362,478
effective HSP length: 77
effective length of query: 564
effective length of database: 1,977,170
effective search space: 1115123880
effective search space used: 1115123880
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 57 (27.1 bits)
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