Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001895-TA|BGIBMGA001895-PA|undefined
(641 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0018 + 31075488-31075694 34 0.40
06_03_0433 - 20718726-20719895 33 0.53
07_03_1794 - 29580767-29584189 32 1.2
12_01_1042 - 10723599-10723906,10724849-10724912 32 1.6
04_03_0049 - 10158876-10159381,10159823-10159904 32 1.6
03_02_0021 - 5049705-5049713,5049744-5049770,5049877-5049940,505... 32 1.6
11_01_0420 - 3230936-3231710,3232265-3233885,3234411-3234834 31 2.1
06_03_1105 - 27634787-27636025 31 2.1
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 31 2.1
06_01_1173 + 10014391-10014678,10015478-10017245,10017333-100174... 31 2.8
05_03_0595 + 15972381-15972566,15975641-15975710,15975813-15975868 31 2.8
04_03_0559 + 17118319-17118396,17119329-17119467,17119569-171196... 31 2.8
03_01_0586 - 4339090-4339194,4340186-4340366,4340531-4340601,434... 31 3.7
01_05_0317 + 20822881-20822994,20824036-20824176,20824249-20825022 31 3.7
12_01_0924 + 9161155-9161646,9161748-9162164,9162250-9162313,916... 30 4.9
05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,753... 30 4.9
01_01_0833 - 6517489-6517503,6517762-6517827,6517938-6518006,651... 30 4.9
12_01_0395 - 3117315-3118117,3118354-3118478,3118558-3118770,311... 29 8.6
08_02_1330 + 26191062-26191314,26191894-26191961,26192125-261923... 29 8.6
06_03_0355 + 19822110-19824491 29 8.6
01_05_0351 + 21269339-21269527,21269758-21269961 29 8.6
01_02_0078 - 10894871-10895841,10897268-10898426 29 8.6
01_02_0038 - 10487024-10487728,10487824-10488272,10488356-10489070 29 8.6
>03_06_0018 + 31075488-31075694
Length = 68
Score = 33.9 bits (74), Expect = 0.40
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Query: 194 PVMMSPSPENVSAPRANSVNLPSASSHNDLEAY 226
P+MM+ +P S+PRAN+V LP +H+D+ Y
Sbjct: 13 PMMMASAP---SSPRANAVGLPDDLNHSDIAGY 42
>06_03_0433 - 20718726-20719895
Length = 389
Score = 33.5 bits (73), Expect = 0.53
Identities = 40/172 (23%), Positives = 68/172 (39%), Gaps = 15/172 (8%)
Query: 217 ASSHNDLEAYSHDIPSTSNDNTGQGDVVESTSLYGPYIMQSNARGEELLVRRTM---SLW 273
+S+ + EA S+D T+N + G+ ES S + ++ G+++ T+ S
Sbjct: 94 SSADGNTEANSNDEDGTTNHSEGEKSDAESNSSDAESKGEDHSTGDDMPQSNTVLEESSA 153
Query: 274 PTSGLACHHATTGDLVCLSEMLNSDEEEYPDGILYEYHKGHSRRVDPNNLSSVYHLKIAK 333
T+ + GD E N D+ E VD N S AK
Sbjct: 154 ETNRMPHEEVAHGD-----ESTNEDQSNVKSDGSNEEEAEKKEAVDSQNASESLS-DDAK 207
Query: 334 NSTGEK----TKPDSDSHIPT--KENDTTEQATTSSNVCAELPRCMVWSERE 379
T ++ T PD ++P+ EN ++ +T+S+ +E SE E
Sbjct: 208 GGTDDEHSSGTLPDETGNLPSGQNENSQSDATSTTSDASSEAVHIETGSENE 259
>07_03_1794 - 29580767-29584189
Length = 1140
Score = 32.3 bits (70), Expect = 1.2
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 318 VDPNNLSSVYHLKIAKNSTGEKTKPDSDSHIPTKENDTTEQATTSSNV 365
+DP +++S L A + GE T D + +P +E TE+ATT N+
Sbjct: 388 IDPEDMTS---LSAAVENDGEITSDDISTSLPEEEFRGTEEATTDDNL 432
>12_01_1042 - 10723599-10723906,10724849-10724912
Length = 123
Score = 31.9 bits (69), Expect = 1.6
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 42 SPNVPSTSGINRVNEPDSNCRESRKRPSSLKLNRPNFDADDSSSDTGNDDYSLGSE 97
SP++PS+ + + P SN + K+PSS ++ R N D S GN L E
Sbjct: 28 SPSIPSSPWLPCILPPRSNLNQITKKPSSTQVKRNNQTRD---SPNGNSTARLSIE 80
>04_03_0049 - 10158876-10159381,10159823-10159904
Length = 195
Score = 31.9 bits (69), Expect = 1.6
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 197 MSPSPENVSAPRANSVNLPSASSHN-DLEAYSHDIPSTSNDNTGQGDVVESTSLY 250
MS P N + SV LP+ +S+ + E+ SH+I + SN+ +G+ +++S S Y
Sbjct: 1 MSEVPRNRHQEKIWSV-LPNPTSNGGEGESTSHEILTVSNEKSGEASMLDSASSY 54
>03_02_0021 -
5049705-5049713,5049744-5049770,5049877-5049940,
5050019-5050806,5050888-5051046,5051778-5052419
Length = 562
Score = 31.9 bits (69), Expect = 1.6
Identities = 24/75 (32%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 167 SCEMDTGDESIPDAEIEAASNMPEENEPVMMSPSPENVSAPRANSVNLPSASSHNDLEAY 226
SC MDT +P + A E++ + PSP AP PSA S Y
Sbjct: 454 SCTMDTDRPDMP-VKSPFAERWLNESKVI---PSPSRQPAPWQLKQGAPSAGSSYHSMPY 509
Query: 227 SHDIPSTSNDNTGQG 241
D+ S NTG G
Sbjct: 510 GLDLLSRGKRNTGDG 524
>11_01_0420 - 3230936-3231710,3232265-3233885,3234411-3234834
Length = 939
Score = 31.5 bits (68), Expect = 2.1
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 10/121 (8%)
Query: 158 LEMDFDPGPSCEMDTGDESIPDAE--IEAASNMPEENEPV--MMSPSPENVSAPRANSVN 213
+E D + TG++ D + E + + EPV M+SPS ++ + +N +
Sbjct: 452 MEADVESVAGASAFTGEQITVDKKGLFERICVLWNDTEPVKPMLSPSQDDTHSKGSNDLL 511
Query: 214 LPSASS--HNDLEAYSHDIPSTSNDNTGQGDVVESTSLYGPYI--MQSNARGEELLVRRT 269
A+S HN L + I ST+ DN+ GD V+STS M +N ++L V+
Sbjct: 512 TQYANSNEHNSLLTRTLKIFSTT-DNS-DGDNVDSTSAISSSFSNMTANDHSDKLNVKEN 569
Query: 270 M 270
+
Sbjct: 570 V 570
>06_03_1105 - 27634787-27636025
Length = 412
Score = 31.5 bits (68), Expect = 2.1
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Query: 156 DFLEMDFDPGPSCEMDTGDESIPDAE---IEAASNMPEENEPVMMSPSPENVSAPRANSV 212
DF++ +F G S M DE D + + A+ +PE + P PE + AP
Sbjct: 69 DFIDFEFSLGGSATMLPADELFADGKLLPLRKAAAVPEMDAAAPRPPQPEAMPAPSEPMK 128
Query: 213 NLPSASSHNDLE---AYSHDIPSTSN 235
L +A++ D +S PS S+
Sbjct: 129 PLRAATAAVDAADPYVFSPKAPSCSS 154
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 31.5 bits (68), Expect = 2.1
Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 4/185 (2%)
Query: 183 EAASNMPEENEPVMMSPSPENVSAPRANSVNLPSASSHNDLEAYSHDIPSTSNDNTGQGD 242
E + PE++ P EN++ + + +S LE + + ++NT +
Sbjct: 2021 EVTQHEPEDSIPRTTDAMVENITEIKEETEEENGPNSGGTLEVSAKNYNEDVHENTEKDA 2080
Query: 243 VVESTSLYGPYIMQSNARGEELLVRRTMSLWPTSGLACHHATTGDLVCLSEMLNSDEEEY 302
VVE TS + R EE + T+ S L DL +ML ++
Sbjct: 2081 VVEKTSSSEHDEIAGEIRNEE-VTYVTVEPCLASSLERDLQVDSDL-SNDQMLENNPIAV 2138
Query: 303 P--DGILYEYHKGHSRRVDPNNLSSVYHLKIAKNSTGEKTKPDSDSHIPTKENDTTEQAT 360
P D +Y +G++ +V+ + + K+ +++ ++ + D+ + E+ T Q
Sbjct: 2139 PQNDEYMYRAEEGYTNKVNVDMHAIQESDKVIEDAEEKQGMQNEDNVVHHDESLVTTQKE 2198
Query: 361 TSSNV 365
+S V
Sbjct: 2199 EASQV 2203
>06_01_1173 +
10014391-10014678,10015478-10017245,10017333-10017436,
10017632-10017706,10017887-10017918,10019396-10019482,
10020848-10021294,10021477-10021630,10022203-10022329,
10022547-10022632,10022719-10022790,10023083-10023286,
10023732-10024049
Length = 1253
Score = 31.1 bits (67), Expect = 2.8
Identities = 16/40 (40%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 313 GHSRRVDPNNLSSVYH----LKIAKNSTGEKTKPDSDSHI 348
GH++++ P N S V+ L++AK+S G+K KPD+ S +
Sbjct: 366 GHAKKISPKNSSDVHKAWKMLEMAKSSGGKK-KPDNPSSL 404
>05_03_0595 + 15972381-15972566,15975641-15975710,15975813-15975868
Length = 103
Score = 31.1 bits (67), Expect = 2.8
Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Query: 62 RESRKRPSSLKLN--RPNFDADDSSSDTGNDD 91
+ SR RPS K+ RP ++A DS SD NDD
Sbjct: 69 KASRYRPSVWKVGTKRPGYNASDSDSDEMNDD 100
>04_03_0559 +
17118319-17118396,17119329-17119467,17119569-17119660,
17119974-17120660
Length = 331
Score = 31.1 bits (67), Expect = 2.8
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 553 YTPDTDLTPLMFVPDRRFHTYNVFGQVVNLIREWRAAGWV------ERSTRTRHVRVPAS 606
+ P TD++ + H + V +VV+ + W+A G E T +R + A+
Sbjct: 70 FIPVTDVSGEVIEVGSAIHEFKVGDKVVSKLNLWKAGGLAEYVAASESDTVSRPAGISAA 129
Query: 607 YQAGVTVAALTGSEA 621
AG+ VA LT +A
Sbjct: 130 DAAGLPVAGLTALQA 144
>03_01_0586 -
4339090-4339194,4340186-4340366,4340531-4340601,
4340689-4340826,4341342-4342337
Length = 496
Score = 30.7 bits (66), Expect = 3.7
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 162 FDPGPSCEMDTGDESIPDAEIEAASNMPEENEPVMMSPSPENVSAPRANSVNLPSASSHN 221
F P + + + +I DA EA + EN+ + P++VS NSV P S +
Sbjct: 197 FQPVTNVDAERVINNINDAVQEAKPTL--ENKAA--TDEPDSVSTFEPNSVIEPENLSLD 252
Query: 222 DLEAYSHDIPSTSNDNTGQGDVVE 245
DL+ S D P S+ + G+ E
Sbjct: 253 DLDHISDDEPDASDTDEPSGEYDE 276
>01_05_0317 + 20822881-20822994,20824036-20824176,20824249-20825022
Length = 342
Score = 30.7 bits (66), Expect = 3.7
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 54 VNEPDSNC--RESRKRPSSLKLNRPNFDADDSSSDTG-NDDYSLGSEDGCIYTYRGGEHL 110
VN + +C R K+P+S++L+ D S S+ G +DD+ + EDG + GE
Sbjct: 178 VNNKEIHCGDRTIGKKPTSVQLDD---SVDSSDSEHGMSDDFCVADEDGIGHDVSAGEDS 234
Query: 111 ADL 113
D+
Sbjct: 235 VDV 237
>12_01_0924 +
9161155-9161646,9161748-9162164,9162250-9162313,
9162621-9163030
Length = 460
Score = 30.3 bits (65), Expect = 4.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 165 GPSCEMDTGDESIPDAEIEAASNMPEENEPVMMSPSP 201
G +C + G++ + A+ A N EE+E M PSP
Sbjct: 3 GYACWVKRGEQEVTSADRSGAKNQEEEDEHDMFVPSP 39
>05_03_0031 -
7534327-7534480,7535546-7535649,7535724-7535793,
7535889-7535932,7536042-7536146,7536223-7536344,
7536807-7536894,7536966-7537052,7537718-7537786,
7537859-7538188,7539777-7539824,7540003-7540069,
7540150-7540208,7541220-7541453,7541536-7541601,
7541684-7541883,7542104-7542197,7542295-7542414,
7542596-7542703,7542808-7542871,7543378-7543409,
7546049-7548007
Length = 1407
Score = 30.3 bits (65), Expect = 4.9
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 163 DPGPSCEMDTGDESIPDAEIEAASNMP-EENEPVMMSPSPENVSAPRAN 210
D G C D S P + +A P ++ P M SP P +V++ AN
Sbjct: 226 DSGVDCSPDPPPSSSPPVDFDARGFDPVADSAPAMESPLPPSVASSEAN 274
>01_01_0833 -
6517489-6517503,6517762-6517827,6517938-6518006,
6518104-6518214,6518319-6518526,6518598-6518653,
6519048-6519689
Length = 388
Score = 30.3 bits (65), Expect = 4.9
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 144 REQGSRASSPDMDFLEMDFDPGPSCEMDTGDESIPDAEIE-AASNMPEE--NEPVMMSPS 200
RE A + E++ D G S E D+SIPD +E + SN +E +E ++ S
Sbjct: 248 REAIEEAFLAERGLFELETDEGCSLEKSVNDQSIPDGLLEGSGSNNEQECQSEAQVVGKS 307
Query: 201 P 201
P
Sbjct: 308 P 308
>12_01_0395 -
3117315-3118117,3118354-3118478,3118558-3118770,
3118850-3120076,3120537-3120622,3121197-3121223
Length = 826
Score = 29.5 bits (63), Expect = 8.6
Identities = 13/62 (20%), Positives = 30/62 (48%)
Query: 36 QDLAANSPNVPSTSGINRVNEPDSNCRESRKRPSSLKLNRPNFDADDSSSDTGNDDYSLG 95
+D+ N + ++G+ PDS C+ ++R ++ + + DS+S+ D + +
Sbjct: 735 EDMTINRSTISKSNGVGAAQAPDSGCQHVQERCEPIEFVPIDHNDPDSASEACLDLFPVR 794
Query: 96 SE 97
E
Sbjct: 795 HE 796
>08_02_1330 +
26191062-26191314,26191894-26191961,26192125-26192355,
26192736-26192837,26192893-26192955,26193910-26193984
Length = 263
Score = 29.5 bits (63), Expect = 8.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Query: 175 ESIPDAEIEAASNMPEENEPVMMSPSPENVSAPRANSVNLPSA 217
+S+P EI ++ ++ EPV P N + P VN PSA
Sbjct: 137 KSVP--EISTSAKPVQKREPVQKREPPVNAALPATKKVNEPSA 177
>06_03_0355 + 19822110-19824491
Length = 793
Score = 29.5 bits (63), Expect = 8.6
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 580 VNLIREWRAAGWVERSTRTRHVRVPASYQAGVTVAALTGSEAHRRLNAARQLPVITPQND 639
+NL+RE R A +T V PA+ A VT AA TG E A ++ V TP +
Sbjct: 646 INLLREKRKATVTNPATEEAKVTTPATEVAEVTTAA-TGVEV--TTPATEKVEVTTPATE 702
>01_05_0351 + 21269339-21269527,21269758-21269961
Length = 130
Score = 29.5 bits (63), Expect = 8.6
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 23 NQDVLSCQKHKICQDLAANSPNVPSTS-GINRVNEPDSNCRESRKRPSSL 71
+ D SC + C LAA++P+ P++ G+++ E CR K P+SL
Sbjct: 15 SDDFYSCGEASPCS-LAASAPSCPASRLGLSKKLEARELCRAELKLPTSL 63
>01_02_0078 - 10894871-10895841,10897268-10898426
Length = 709
Score = 29.5 bits (63), Expect = 8.6
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 501 LPDAWHHQMVFGVSPRGVYLCNPVECVREHVLWARLVSPSVLLVRSRDILSR 552
L D HQM+ G +P+ YLC+ V+ L RL +P RSR L+R
Sbjct: 363 LDDPSIHQMIIGDAPKPPYLCSDNGHVQRVTLACRLKTPR----RSRAELAR 410
>01_02_0038 - 10487024-10487728,10487824-10488272,10488356-10489070
Length = 622
Score = 29.5 bits (63), Expect = 8.6
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 151 SSPDMDFLEMDFDPGPSCEMDTGDESIPDAEIEAASNMPEENEPVMMSPSPENVSAPRA 209
+SP E+D G ++ ES+P+ + + E + VM + PE++ A R+
Sbjct: 559 ASPRFQVYEVDLGWGAPSRVEFASESLPNGMVAMTAGRKEASVQVMATLRPEHMEAFRS 617
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.130 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,136,391
Number of Sequences: 37544
Number of extensions: 907515
Number of successful extensions: 1951
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1941
Number of HSP's gapped (non-prelim): 26
length of query: 641
length of database: 14,793,348
effective HSP length: 87
effective length of query: 554
effective length of database: 11,527,020
effective search space: 6385969080
effective search space used: 6385969080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 63 (29.5 bits)
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