Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001895-TA|BGIBMGA001895-PA|undefined
(641 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 35 0.23
SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.53
SB_33075| Best HMM Match : Big_2 (HMM E-Value=1.7) 33 0.70
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 32 1.2
SB_46754| Best HMM Match : zf-C2H2 (HMM E-Value=1.5e-29) 31 2.2
SB_7993| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.2
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 31 2.8
SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.8
SB_23651| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.8
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 31 2.8
SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2) 31 2.8
SB_28025| Best HMM Match : Peptidase_M10 (HMM E-Value=5.1e-36) 31 3.8
SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.8
SB_14839| Best HMM Match : Homeobox (HMM E-Value=4.3e-13) 31 3.8
SB_19513| Best HMM Match : UPF0058 (HMM E-Value=5.1) 30 5.0
SB_14778| Best HMM Match : MH1 (HMM E-Value=2.8026e-45) 30 5.0
SB_55241| Best HMM Match : PH (HMM E-Value=6.1e-12) 30 5.0
SB_54036| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.0
SB_27034| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.0
SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16) 30 6.6
SB_57229| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.6
SB_35587| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.6
SB_43319| Best HMM Match : Laminin_A (HMM E-Value=0.0086) 29 8.7
SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.7
SB_9023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.7
SB_41998| Best HMM Match : Nol1_Nop2_Fmu (HMM E-Value=3.2e-16) 29 8.7
SB_31117| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.7
SB_9895| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.7
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 34.7 bits (76), Expect = 0.23
Identities = 47/221 (21%), Positives = 88/221 (39%), Gaps = 12/221 (5%)
Query: 36 QDLAANSPNVPSTSGINRVNEPDSNCRESRKRPSSLKLNRP-NFDADDSSSD-TGNDDYS 93
QD + + + P S N N +SN S S+ + P N +D+S++D +G+D+ S
Sbjct: 135 QDNSNSDDSKPDNSNTNNSNSDNSNTDNSNSDNSTSDNSNPDNLTSDNSNTDNSGSDNSS 194
Query: 94 LGSEDGCIYTYRGGEHLADLPSSFFSL-DMGXXXXXXXXXXXXXXVPQQGQREQGSRASS 152
G+ + T +D +S S D ++ S ++
Sbjct: 195 SGNFNSDNST--SDNSTSDNSNSDNSTSDNSTSDNSNSDNSYTDNSTSDNSKKDNSNPNN 252
Query: 153 PDMDFLEMDFDPGP-SCEMDTGDESIPDAEIEAASNMPEENEPVMMSPS----PENVSAP 207
+ D + P + D + +++ ++ N +N S S PEN ++
Sbjct: 253 SNTDNSSSADNSNPDNSNSDNSNTDNSNSDNSSSDNSNSDNSNTDNSTSNNSNPENSTSD 312
Query: 208 RANSVNLPSASSHNDLEAYSHDIPSTSNDNTGQGDVVESTS 248
+NS N +S++D D +T+N N+ + STS
Sbjct: 313 NSNSNNSNQDNSNSD--DSKPDNSNTNNSNSDNSNSDNSTS 351
Score = 29.9 bits (64), Expect = 6.6
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 36 QDLAANSPNVPSTSGINRVNEPDSNCRES---RKRPSSLKLNRPNFD---ADDSSSDTGN 89
QD + + + P S N N +SN S P +L + PN D +D+SSS N
Sbjct: 321 QDNSNSDDSKPDNSNTNNSNSDNSNSDNSTSDNSNPDNLTSDNPNTDNSGSDNSSSGNFN 380
Query: 90 DDYS 93
D S
Sbjct: 381 SDNS 384
>SB_663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2028
Score = 33.5 bits (73), Expect = 0.53
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 34 ICQDLAANSPNVPSTSGINRVNEPDSNCRESRKRPSSLKLNRPNFDADDSSSDTGNDDYS 93
+ ++ AA P++ S+ + +EP+ R R +L N+D D +D +DD
Sbjct: 1401 VVENHAARPPSLASSDVSDVQSEPEQRTRSGRVSKKPQRLGTDNYDDDIEGTDNYDDDDD 1460
Query: 94 L-GSED 98
+ GS+D
Sbjct: 1461 IDGSDD 1466
>SB_33075| Best HMM Match : Big_2 (HMM E-Value=1.7)
Length = 334
Score = 33.1 bits (72), Expect = 0.70
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Query: 177 IPDAEIEAASNMPEENEPVMMSPSPENVSAPRANSVNLPSASSHNDLEAYSHDIPSTSND 236
+ D +IE N ++ E +SP+P V+ RANS + + + + PST N
Sbjct: 198 VDDGDIEVGDNSSKQMEKRSVSPTP-RVALSRANSTQIADSYRRPTAHSLAKTYPSTRNH 256
Query: 237 NTGQGDV 243
DV
Sbjct: 257 KPNIRDV 263
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 32.3 bits (70), Expect = 1.2
Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 4/134 (2%)
Query: 169 EMDTGDESIPDAEIEAASNMPEENEPVMMS---PSPENVSAPRANSVNLPSASSHNDLEA 225
+MD G E + D EIEAA+ + V + P E V+ S H+D
Sbjct: 2787 KMDNGQEEMLD-EIEAATAEKTADADVFKTKELPVEELQEEVEVEHVDDKILSDHDDKTP 2845
Query: 226 YSHDIPSTSNDNTGQGDVVESTSLYGPYIMQSNARGEELLVRRTMSLWPTSGLACHHATT 285
S DI + T Q D + S P ++ + EE+ V+R + G +C
Sbjct: 2846 ASEDIDNYDEHETHQKDSEDEHSEDEPGVIITGVFLEEVEVKRLLEGEREDGPSCEEVDE 2905
Query: 286 GDLVCLSEMLNSDE 299
+ E+L E
Sbjct: 2906 EKDISEEELLEEVE 2919
>SB_46754| Best HMM Match : zf-C2H2 (HMM E-Value=1.5e-29)
Length = 487
Score = 31.5 bits (68), Expect = 2.2
Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 330 KIAKNSTGEKTKPDSDSHIPTKENDTTEQATTSSNVCAELPRCMVWSEREACERQVTQIG 389
K+++ E+ K T+EN+ E T ++NV +L + +EA + +
Sbjct: 391 KMSRKRPSERAKQRQQQFKKTRENNLGESETENNNVSMDLIDGLEKLRKEALDIDHSIAE 450
Query: 390 TSACGATAVINVFIALGVPVNIEKITSAVGTRLRANN 426
+C ++ A P+N+ T++ G R R+ N
Sbjct: 451 EDSCKDKWAVS---AAAEPLNVSSATTSRGRRGRSRN 484
>SB_7993| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 31.5 bits (68), Expect = 2.2
Identities = 37/173 (21%), Positives = 65/173 (37%), Gaps = 15/173 (8%)
Query: 13 KKVYDNGVELNQDVLSCQKHKICQDLAANSPNVPSTSGINRVNEPDSNCRESRKRPSSLK 72
+K ++G+E +V + + + + NS + + + RV EP S E+ P+ K
Sbjct: 68 EKAVNDGIEKPSEVGMQESSENKEGMKPNSQEDINEADLTRVGEPSSG--ENDANPN--K 123
Query: 73 LNRPNFDADDSSSDTGNDDYSLGSEDGCIYTYRGGEHLADLPSSFFSLDMGXXXXXXXXX 132
+ D + + D DD GS + T + H+A+ G
Sbjct: 124 DENISGDGGEGNKDVKGDDREKGSTESGEITEKDYSHIAEESK---GKKQGVDTPQTENV 180
Query: 133 XXXXXVPQQGQREQGSRASSPDMDFLEMDFDPGPSCEMDTGDESIPDAEIEAA 185
GQ + GS S + D +D PS E E++P E++
Sbjct: 181 V--------GQGQMGSNGSQAENDEQRVDGSAKPSTEGGVSVEALPSQNTESS 225
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 31.1 bits (67), Expect = 2.8
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Query: 140 QQGQREQGSRASSPDMDFLEMDFDPGPSCEMDTGDESIPDAEIEAASNMPEENEPVMMSP 199
Q+G+ E S P + E+D S E ES+ + EE PV
Sbjct: 1310 QEGKAESEGTESVPQGEAPEVDIAEPTSEETPVEGESLEAQAVGHVEAAGEETSPVQ--- 1366
Query: 200 SPENVSAPRANSVNLPSASSHNDLEAYSHDIPSTSNDNTGQGDVVES 246
S + S ++P+ S +++ DI +++D D+VES
Sbjct: 1367 SNQIESTVEEVPTDVPTESPSAEVKPVQSDIVESTSDEAPAEDLVES 1413
>SB_24117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1276
Score = 31.1 bits (67), Expect = 2.8
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 171 DTGDESIPDAEIEAASNMPEENEPVMMSPSPENVSAPRANSVNLPSASSHNDLEAYSHDI 230
+T D+S+ D + ++ +PE ++ V EN + R +S+ P S ND Y DI
Sbjct: 209 ETKDDSVTDVNTKKSAILPESSQAV-TDQVEENDGSVR-DSIAAPKPKSFNDASLYDADI 266
>SB_23651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 31.1 bits (67), Expect = 2.8
Identities = 45/193 (23%), Positives = 66/193 (34%), Gaps = 18/193 (9%)
Query: 174 DESIPDAEIEAASNMPEENEPVMMSPSPENVSAPRANSVNLPSASSHNDLEAYSHDIPST 233
DES + E E S+ E + P P + ++P+ S + S S
Sbjct: 518 DESESETESETESSTEESSSEEEQKPPPRTTPVRKTAVNSIPAKPSQQRAQLKSESTGSE 577
Query: 234 SNDNTGQGDVVESTSLYGPYIMQSNARGEELLVRRTMSLWPTSGLACHHATTGDLVCL-S 292
S T + T P + S ++S TS + TTG L S
Sbjct: 578 SETETSSEEEAAPTKT-PPSTVNSRTPVTRAQSTPSLSSSVTSPTSRQPVTTGGSRALKS 636
Query: 293 EMLNSDEEEYPDGILYEYHKGHSRRVDPNNLSSVYHLKIAKNSTGEKTKPDSDSHIPTKE 352
L+ D+ KG + P S + + A EK +P S PT+
Sbjct: 637 PFLDQDK------------KGPASPTTPTTPSRTFGSRFADRE--EKKEPSSQFGFPTRT 682
Query: 353 N--DTTEQATTSS 363
TT +TTSS
Sbjct: 683 TAATTTTNSTTSS 695
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 31.1 bits (67), Expect = 2.8
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Query: 140 QQGQREQGSRASSPDMDFLEMDFDPGPSCEMDTGDESIPDAEIEAASNMPEENEPVMMSP 199
Q+G+ E S P + E+D S E ES+ + EE PV
Sbjct: 205 QEGKAESEGTESVPQGEAPEVDIAEPTSEETPVEGESLEAQAVGHVEAAGEETSPVQ--- 261
Query: 200 SPENVSAPRANSVNLPSASSHNDLEAYSHDIPSTSNDNTGQGDVVES 246
S + S ++P+ S +++ DI +++D D+VES
Sbjct: 262 SNQIESTVEEVPTDVPTESPSAEVKPVQSDIVESTSDEAPAEDLVES 308
>SB_25374| Best HMM Match : DUF1087 (HMM E-Value=3.2)
Length = 144
Score = 31.1 bits (67), Expect = 2.8
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 2 NSCNDK-DVISSKKVYDNGVELNQDVLSCQKHKICQDLAANSPNVPSTSGINRVNEPDSN 60
NS +D D +S N LN D L+ K K + NS + S S +++ +SN
Sbjct: 2 NSDSDNSDSDTSNSDNSNSDNLNSDNLNSDKLKSDNSNSDNSNSDNSNS--DKLKSDNSN 59
Query: 61 CRESRKRPS-SLKLNRPNFDADDSSSDTGNDD 91
+ S S N N ++D+S+SD N D
Sbjct: 60 SEKLNSNNSDSNNSNSDNSNSDNSNSDNSNSD 91
>SB_28025| Best HMM Match : Peptidase_M10 (HMM E-Value=5.1e-36)
Length = 219
Score = 30.7 bits (66), Expect = 3.8
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 5/56 (8%)
Query: 295 LNSDEEEYPDGILYEYHKGHSRRV-----DPNNLSSVYHLKIAKNSTGEKTKPDSD 345
L D + I+Y Y+ G+ ++ D + S+Y KI +N+ K K D D
Sbjct: 127 LGLDHSDVQGAIMYPYYTGYDPKIALHSDDIKGVQSLYGQKIVENNKSRKRKQDCD 182
>SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6500
Score = 30.7 bits (66), Expect = 3.8
Identities = 16/65 (24%), Positives = 28/65 (43%)
Query: 372 CMVWSEREACERQVTQIGTSACGATAVINVFIALGVPVNIEKITSAVGTRLRANNAPIPR 431
C +W+ + + I G ++ VPV IE++ G+ +RANN P+
Sbjct: 3790 CFIWTLDDVGVAINSSIALDKLGVRVIVVAMQMPNVPVEIEQVAPDRGSIIRANNNDKPQ 3849
Query: 432 YILSR 436
I +
Sbjct: 3850 AIADK 3854
>SB_14839| Best HMM Match : Homeobox (HMM E-Value=4.3e-13)
Length = 319
Score = 30.7 bits (66), Expect = 3.8
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 200 SPENVSAPRANSVNLPSASSHNDLEAYSHDIPS 232
S + V+ PR N +N+PS N+ E+ S D+PS
Sbjct: 229 SDDKVNIPRDNEINIPS-DIENNTESVSIDVPS 260
>SB_19513| Best HMM Match : UPF0058 (HMM E-Value=5.1)
Length = 188
Score = 30.3 bits (65), Expect = 5.0
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 27 LSCQKHKICQDLAANSPNVPSTSGINRVNEPDSNCRESRKRPSSLKLNRP 76
L+C K + +D A N+PN PS G+ + + SRK PS L P
Sbjct: 97 LACSKQPL-ED-AMNTPNRPSQQGVTEEDRTSPSSIWSRKSPSVCYLGTP 144
>SB_14778| Best HMM Match : MH1 (HMM E-Value=2.8026e-45)
Length = 1133
Score = 30.3 bits (65), Expect = 5.0
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 55 NEPDSNCRESRKRPSSLKLNRPNFDADDSSSDTGNDDYSLGSED 98
NE ++NC + K P R + DD ++D N D S+G++D
Sbjct: 931 NERETNCSPAPK-PGMSTGTRHDSRPDDGATDAANTDRSMGAKD 973
>SB_55241| Best HMM Match : PH (HMM E-Value=6.1e-12)
Length = 734
Score = 30.3 bits (65), Expect = 5.0
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 8/84 (9%)
Query: 2 NSCNDKDVISSKKVYDNGVELNQDVLSCQKHKICQD-LAANSPNVPSTSGIN--RVNEP- 57
N N V+S + + E V+S Q K C+ L + P P SG + V E
Sbjct: 53 NEPNGIAVVSESRKQEQETESEVPVVSDQNDKDCKSGLPVSLPIAPEASGDDGKEVFESL 112
Query: 58 ----DSNCRESRKRPSSLKLNRPN 77
SNC+ES+K +S + PN
Sbjct: 113 MEIVSSNCKESQKTSASGACDEPN 136
>SB_54036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 30.3 bits (65), Expect = 5.0
Identities = 20/91 (21%), Positives = 39/91 (42%)
Query: 2 NSCNDKDVISSKKVYDNGVELNQDVLSCQKHKICQDLAANSPNVPSTSGINRVNEPDSNC 61
N+ N+ + ++K Y+N N + + + + N+ N + + I N ++N
Sbjct: 23 NNNNNNNNNNNKNNYNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNIKNNNNNNNNN 82
Query: 62 RESRKRPSSLKLNRPNFDADDSSSDTGNDDY 92
++ N + D DD D G+DDY
Sbjct: 83 NNKNNNNNNNNNNNNDDDDDDDDVDDGDDDY 113
>SB_27034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 629
Score = 30.3 bits (65), Expect = 5.0
Identities = 16/60 (26%), Positives = 26/60 (43%)
Query: 33 KICQDLAANSPNVPSTSGINRVNEPDSNCRESRKRPSSLKLNRPNFDADDSSSDTGNDDY 92
K+ D+ A P++S N+ + R RP+ + + D DD + D N DY
Sbjct: 138 KLRNDVNALRTMAPASSSDEDDNDESDKKDQQRNRPAEVSYDIEKSDYDDDNGDDDNYDY 197
>SB_32465| Best HMM Match : Chromo (HMM E-Value=3.5e-16)
Length = 411
Score = 29.9 bits (64), Expect = 6.6
Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 139 PQQGQREQGSRASSPDMDFLEM----DFDPGPSC-EMDTGDESIPDAEIEAASNMPEENE 193
P++ +R+Q + P+ EM + +P + + +TG+ SIP+ +AA+ E +
Sbjct: 201 PKKKKRKQKRKLKIPEKCSSEMVHLANDEPSTNFGKTETGELSIPEDSPKAATGEIEMKD 260
Query: 194 PVMMSPSP-ENVSAPRANSVNLPSASSHNDLEAYSHDIPS---TSNDNTGQGDVVESTSL 249
+ P+P E+ P SV+ A++H+ P T++ + G G S SL
Sbjct: 261 LTLEIPTPRESCQFPGPVSVSPRVATTHSPPPISPRVTPEKTPTASTSNGHGIPSASVSL 320
Query: 250 YG 251
G
Sbjct: 321 LG 322
>SB_57229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 29.9 bits (64), Expect = 6.6
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 24 QDVLSCQKHKICQDLAANSPNVPSTSGINRVNEPDSNCRESRKRPSSLKLNRPNFDADDS 83
Q++ + + + +C + SPN S +G R D PS++ LN P+ D+D+
Sbjct: 35 QNMAALRDNLVCNNKREASPNSRSGAGSARKKSRDET---EGLDPSTIALNSPSGDSDNR 91
Query: 84 SSDTGNDDYS 93
D+ S
Sbjct: 92 DKGDSEDEES 101
>SB_35587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 29.9 bits (64), Expect = 6.6
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 375 WSEREACERQVTQIGTSAC------GATAVINVFIALGVPVNIEKITSAVGTRL 422
W++RE + GTS C GA+ I++ G P+N+ +I VG L
Sbjct: 403 WTQRENIRPTPLKTGTSGCEDSVFGGASDAIDMVRKYGFPMNVYRIADVVGRPL 456
>SB_43319| Best HMM Match : Laminin_A (HMM E-Value=0.0086)
Length = 375
Score = 29.5 bits (63), Expect = 8.7
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 218 SSHNDLEAYSHDIPSTSNDNTGQGDVVESTSLYGPYI-MQSNARGEELLVRRTMSLWPT 275
S N + S IP T N NT V EST + + S GE L+ + + PT
Sbjct: 187 SMDNTIRTLSGSIPETINTNTVTSTVGESTMALNVVVNLSSRELGEVALLSKGLKFCPT 245
>SB_12106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 29.5 bits (63), Expect = 8.7
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 5 NDKDVISSKKVYDNGVELNQDVLSCQKHKICQDLAANSPNVPSTSGINRVNEPDSNCRES 64
NDKD DN N D + D N N +T+ N ++ + N +
Sbjct: 62 NDKDTNDDNTNEDNDKNNNDDNNNKTNDNDTNDENINDDNEKNTNDKNNNDDSNENTNDD 121
Query: 65 RKRPSSLKLNRPNFDADDSSSDTGNDD 91
+ ++ ++ N D D +++D +D+
Sbjct: 122 NDKNTNDDNDKKNDDKDKNTNDDFDDN 148
>SB_9023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 29.5 bits (63), Expect = 8.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 65 RKRPSSLKLNRPNFDADDSSSDTGND 90
RK+ SLK + FDA DSSS++ D
Sbjct: 50 RKKKKSLKTGQSLFDASDSSSESSTD 75
>SB_41998| Best HMM Match : Nol1_Nop2_Fmu (HMM E-Value=3.2e-16)
Length = 467
Score = 29.5 bits (63), Expect = 8.7
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Query: 13 KKVYDNGVELNQDVLSCQKHKICQDLAANSPNVPSTSGI----NRVNEPDSNCRESRKRP 68
K + DNG+EL ++ K ++ SP P+T G+ NR + D +
Sbjct: 68 KLITDNGLELKNRLVEAFAEKNGIQISHGSPRTPTTQGLVERSNRTFKEDLRAILQSEAN 127
Query: 69 SSLKLNRPNFDADDSSSDTGNDDYSLGSE 97
LK + S S+ +D++ G +
Sbjct: 128 KELKRWKKTQQKPVSDSEDDDDEFDDGDD 156
>SB_31117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 29.5 bits (63), Expect = 8.7
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 53 RVNEPDSNCRESRKRPSSLKLNRPNFDADDSSSDTGN-DDYSLGSEDG--CIYTYRGGEH 109
R E S +RK+ S NRP+ + S++ TG DY E C+ YR G+
Sbjct: 51 RTGEQQSVYNNARKKESRTDANRPSPCSSGSTTPTGEVQDYHRNDEQVAICMECYRLGDR 110
Query: 110 L 110
L
Sbjct: 111 L 111
>SB_9895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1547
Score = 29.5 bits (63), Expect = 8.7
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 337 GEKTKPDSDSHIPTKENDTTEQATT--SSNVCAELPRCMVWSERE 379
G K KP +PTK ATT + N+ L CM WSERE
Sbjct: 201 GVKEKPTMP--VPTKVIRPRYNATTDVNYNLSISLSSCMYWSERE 243
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.130 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,061,969
Number of Sequences: 59808
Number of extensions: 1036458
Number of successful extensions: 2801
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 2768
Number of HSP's gapped (non-prelim): 61
length of query: 641
length of database: 16,821,457
effective HSP length: 87
effective length of query: 554
effective length of database: 11,618,161
effective search space: 6436461194
effective search space used: 6436461194
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 63 (29.5 bits)
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