GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001894-TA|BGIBMGA001894-PA|undefined
         (302 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.8  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.7  
EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    21   8.5  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 93  DSSGILITVRSSQEDSNTKKVAY 115
           D+  + I +RS QED++T  V Y
Sbjct: 295 DTMYLFIHIRSRQEDTDTLVVIY 317


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)

Query: 93  DSSGILITVRSSQEDSNTKKVAY 115
           D+  + I +RS QED++T  V Y
Sbjct: 251 DTMYLFIHIRSRQEDTDTLVVIY 273


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)

Query: 263 KAEIKCNGGVKMKTPEIVNCVFT 285
           K ++  NGGV +  PE V  V T
Sbjct: 71  KLDVCGNGGVNLLNPEDVELVLT 93


>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 220 GIKDETTKKADLIILAYQILQNQ 242
           G  +   +  D I+L Y+I+QN+
Sbjct: 34  GESNRCKESVDTIMLIYKIIQNE 56


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.134    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,281
Number of Sequences: 317
Number of extensions: 2568
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 302
length of database: 114,650
effective HSP length: 56
effective length of query: 246
effective length of database: 96,898
effective search space: 23836908
effective search space used: 23836908
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)