GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001894-TA|BGIBMGA001894-PA|undefined
         (302 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   2.0  
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    25   3.5  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        25   3.5  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 14/65 (21%), Positives = 32/65 (49%)

Query: 44  LYNLQYNGIKLKQYGSKILQALVSSLQMSNTAKYTVVLEELPLLKYSEEDSSGILITVRS 103
           L  L+  GI +K     + Q  V ++ + N  + T + EE+      +ED + +   ++ 
Sbjct: 128 LAELEKIGINVKAKNFLVFQGAVETIAIKNAKERTALFEEISGSGLLKEDYNRLKHEMQM 187

Query: 104 SQEDS 108
           ++E++
Sbjct: 188 AEEET 192


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)

Query: 133 HLPYMLERGEQRVGTVVKTILQTAFD 158
           HLPY L+  EQ++ T +  ++ TA D
Sbjct: 338 HLPYHLDADEQQIPT-LSEMVSTAMD 362


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 9/28 (32%), Positives = 19/28 (67%)

Query: 37  KINKVSPLYNLQYNGIKLKQYGSKILQA 64
           K+N +S LY++    I LK+Y + ++++
Sbjct: 410 KLNPISVLYHIDDANINLKKYKNMVVKS 437


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.134    0.385 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,769
Number of Sequences: 2123
Number of extensions: 11069
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 3
length of query: 302
length of database: 516,269
effective HSP length: 64
effective length of query: 238
effective length of database: 380,397
effective search space: 90534486
effective search space used: 90534486
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 48 (23.4 bits)