BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001894-TA|BGIBMGA001894-PA|undefined (302 letters) Database: fruitfly 52,641 sequences; 24,830,863 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 33 0.37 EF428975-1|ABO20847.1| 2381|Drosophila melanogaster Kon-tiki pro... 31 2.0 AY051797-1|AAK93221.1| 514|Drosophila melanogaster LD31354p pro... 31 2.0 AE014134-2938|AAF53672.2| 2355|Drosophila melanogaster CG10275-P... 31 2.0 AE014297-111|ABI31133.1| 403|Drosophila melanogaster CG41467-PB... 29 7.9 >AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein protein. Length = 437 Score = 33.5 bits (73), Expect = 0.37 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 12/105 (11%) Query: 108 SNTKKVAYVAILLSWGISISMENAIHLPYMLERGEQRVGTVVKTILQTAFDCNIKQFSFT 167 S T +V YV+ +L+ S S ++ H Q + T+ +T+ Q C + + F Sbjct: 185 SRTYRVRYVSFILTTSSSFSKDDETHY--------QNLDTIFRTLQQANMKCQLDKCEFM 236 Query: 168 QHQLLNFGFSFIDS--DTSRSNDQFTLVYRSPQT--EVKSKLSLS 208 + ++ GF D +TS + Q + P+T E++S L LS Sbjct: 237 KRKVEFLGFVVSDKGIETSPTKVQAISDFPIPRTLKELRSFLGLS 281 >EF428975-1|ABO20847.1| 2381|Drosophila melanogaster Kon-tiki protein. Length = 2381 Score = 31.1 bits (67), Expect = 2.0 Identities = 15/49 (30%), Positives = 26/49 (53%) Query: 166 FTQHQLLNFGFSFIDSDTSRSNDQFTLVYRSPQTEVKSKLSLSFDIGDV 214 FTQ QL S++ +D +RSND F + P T +++ + ++ V Sbjct: 2009 FTQQQLETSQISYMQTDLNRSNDSFQVSAYVPGTNYVAQVDVVMEVEPV 2057 >AY051797-1|AAK93221.1| 514|Drosophila melanogaster LD31354p protein. Length = 514 Score = 31.1 bits (67), Expect = 2.0 Identities = 15/49 (30%), Positives = 26/49 (53%) Query: 166 FTQHQLLNFGFSFIDSDTSRSNDQFTLVYRSPQTEVKSKLSLSFDIGDV 214 FTQ QL S++ +D +RSND F + P T +++ + ++ V Sbjct: 449 FTQQQLETSQISYMQTDLNRSNDSFQVSAYVPGTNYVAQVDVVMEVEPV 497 >AE014134-2938|AAF53672.2| 2355|Drosophila melanogaster CG10275-PA protein. Length = 2355 Score = 31.1 bits (67), Expect = 2.0 Identities = 15/49 (30%), Positives = 26/49 (53%) Query: 166 FTQHQLLNFGFSFIDSDTSRSNDQFTLVYRSPQTEVKSKLSLSFDIGDV 214 FTQ QL S++ +D +RSND F + P T +++ + ++ V Sbjct: 1983 FTQQQLETSQISYMQTDLNRSNDSFQVSAYVPGTNYVAQVDVVMEVEPV 2031 >AE014297-111|ABI31133.1| 403|Drosophila melanogaster CG41467-PB, isoform B protein. Length = 403 Score = 29.1 bits (62), Expect = 7.9 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 78 TVVLEELPLLKYSEE---DSSGILITVRSSQEDSNTKKVAYVAILLSWGISISMENAIHL 134 TVVL P +K S I + V+S N +V +WG+ +++ +H+ Sbjct: 58 TVVLWPCPRMKISSNFLPSFEAISLAVQSISTKLNWSQVDIYIGDDNWGLGLAIAANLHV 117 Query: 135 PYMLERG 141 PY +E G Sbjct: 118 PYRIEIG 124 Database: fruitfly Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 24,830,863 Number of sequences in database: 52,641 Lambda K H 0.318 0.134 0.385 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,472,892 Number of Sequences: 52641 Number of extensions: 505429 Number of successful extensions: 1266 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 1261 Number of HSP's gapped (non-prelim): 7 length of query: 302 length of database: 24,830,863 effective HSP length: 85 effective length of query: 217 effective length of database: 20,356,378 effective search space: 4417334026 effective search space used: 4417334026 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 62 (29.1 bits)
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