GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001893-TA|BGIBMGA001893-PA|IPR004365|nucleic acid
binding, OB-fold, tRNA/helicase-type, IPR008994|Nucleic acid-binding,
OB-fold
         (127 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    22   5.7  
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    21   9.9  

>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 55  DGVIDKNSIKKGTYCCIIGTAVKT-KGVPEVQA-YKFIDLSSQPEMKSSWEI 104
           D ++  N       C  IGT + T +  P +   YK +++++QP +K S ++
Sbjct: 336 DTILSLNEQGHKIDCFGIGTHLVTCQRQPALGCVYKMVEINNQPRIKLSQDV 387


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 81  VPEVQAYKFIDLSSQPEMKSSWEIEVNEANLFLEGKLIPNI 121
           +P++       LS+  ++K SW   V++  + +   L P I
Sbjct: 373 LPQISIILLQQLSAAMKLKLSWVFRVSDILILVHFMLDPYI 413


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.138    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,750
Number of Sequences: 2123
Number of extensions: 4712
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 2
length of query: 127
length of database: 516,269
effective HSP length: 57
effective length of query: 70
effective length of database: 395,258
effective search space: 27668060
effective search space used: 27668060
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)