BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001892-TA|BGIBMGA001892-PA|IPR000834|Peptidase M14, carboxypeptidase A (298 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_37943| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 80 2e-15 SB_49100| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 77 2e-14 SB_24088| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 5e-12 SB_15763| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08 SB_62| Best HMM Match : Peptidase_M14 (HMM E-Value=2.7e-34) 48 1e-05 SB_49098| Best HMM Match : Peptidase_M14 (HMM E-Value=4.5e-12) 38 0.010 SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.16 SB_34368| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28 SB_41552| Best HMM Match : RVT_1 (HMM E-Value=5.4e-32) 32 0.65 SB_37941| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 31 0.86 SB_51769| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1 SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 31 1.5 SB_23547| Best HMM Match : NLPC_P60 (HMM E-Value=2.5) 30 2.6 SB_50158| Best HMM Match : Toxin_16 (HMM E-Value=2) 29 3.5 SB_15157| Best HMM Match : DUF1153 (HMM E-Value=1.7) 29 3.5 SB_27034| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6 SB_18998| Best HMM Match : Exo_endo_phos (HMM E-Value=1.1e-10) 29 6.1 SB_13109| Best HMM Match : Dynein_heavy (HMM E-Value=2.6e-09) 29 6.1 SB_59792| Best HMM Match : RVT_1 (HMM E-Value=4.2039e-45) 28 8.0 SB_24812| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0 SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 28 8.0 SB_6367| Best HMM Match : Seryl_tRNA_N (HMM E-Value=0.84) 28 8.0 >SB_37943| Best HMM Match : Peptidase_M14 (HMM E-Value=0) Length = 249 Score = 79.8 bits (188), Expect = 2e-15 Identities = 59/191 (30%), Positives = 88/191 (46%), Gaps = 11/191 (5%) Query: 26 INKEVEKAKEDLKPVIIIDAGQQGGK-ESVMLALYVIEQLVACNDN----SEMIEKVKWV 80 IN K K D KPV ++ G + S +Y+I +LV+ + + +++K+ ++ Sbjct: 58 INGTNGKYKAD-KPVFFVNCGIHAREWVSPATCMYIIHELVSKYEKDAKVTSVLDKMDFI 116 Query: 81 VLPSTNPDGMEFARYLMP--YWKKNLKPLDDGPRLGVDISRNFDKEWNSCPEVENKFSQI 138 + P NPDG F W+K+ KP +G D++RNF +W + S I Sbjct: 117 IHPMVNPDGYVFTHKNESNRLWRKSRKPTSKAGCIGADLNRNFGYQWGKPGSSDKPCSFI 176 Query: 139 YPGAAAASENETIFIQNALKKYQKNAKIYLSIRRDGHSIAYPYGYSKTAPSNEAKLKRVA 198 Y G A SE E + L K N K YL I G YP+GY+ + E K + Sbjct: 177 YRGEAPYSEVEVKNMAAFLWKLAPNLKGYLDIHSYGQLWMYPWGYTNQSTQVE---KEMD 233 Query: 199 SEIATRVNQKT 209 + ATR NQ T Sbjct: 234 THGATRANQPT 244 >SB_49100| Best HMM Match : Peptidase_M14 (HMM E-Value=0) Length = 313 Score = 77.0 bits (181), Expect = 2e-14 Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 8/174 (4%) Query: 56 LALYVIEQLVACNDNSEMIEKVKWVVLPSTNPDGMEFARYLMPYWKKNLKPLDDGPR-LG 114 LA+ ++E + +D ++M++ +WV+LP N DG E+ R W+K P G + +G Sbjct: 90 LAIKILETGDSDSDVTDMLDNYEWVILPVLNVDGYEYTRTKDRMWRKTRTP---GTKCVG 146 Query: 115 VDISRNFDKEWNSCPEVENKFSQIYPGAAAASENETIFIQNALKKYQKNAKIYLSIRRDG 174 VD +RNF+ + N+ SQIY G A SE T + L + + K Y+ Sbjct: 147 VDPNRNFNYRFGVTGTSNNECSQIYRGKQAFSEKVTYNVAKFLYENRHRLKGYIDFHAYS 206 Query: 175 HSIAYPYGYSKTAPSNEAKLKRVASEIATRVNQKTNGI-YLF--VNTSIYELEG 225 P+GY+ PSN + + A A Q +G Y+F +T+IY G Sbjct: 207 QMFLSPWGYTDAKPSNYTEHMK-AMTAAVNALQAVHGTRYVFGPASTTIYPTAG 259 >SB_24088| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 245 Score = 68.9 bits (161), Expect = 5e-12 Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 5/164 (3%) Query: 38 KPVIIIDAGQQGGK-ESVMLALYVIEQLVACNDN----SEMIEKVKWVVLPSTNPDGMEF 92 KPV ++ G + S +Y+ +QL++ + +++K+ +V++P NPDG F Sbjct: 9 KPVFFMNCGIHAREWVSPATCMYIAKQLLSRYGKDANVTSVLDKMDFVIMPVLNPDGYVF 68 Query: 93 ARYLMPYWKKNLKPLDDGPRLGVDISRNFDKEWNSCPEVENKFSQIYPGAAAASENETIF 152 +W+K LKP +G D +RN+D +W + + + Y G A SE E + Sbjct: 69 TWERQRFWRKTLKPNSGTFCVGTDPNRNWDYKWGAEGASTDPCADDYRGPHAFSEIEIVN 128 Query: 153 IQNALKKYQKNAKIYLSIRRDGHSIAYPYGYSKTAPSNEAKLKR 196 + LKK K Y+ I P+G+++T + +L R Sbjct: 129 VAKYLKKLGDRIKGYMDIHAYSQFWMIPWGHTQTPSKDYQELVR 172 >SB_15763| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 391 Score = 55.2 bits (127), Expect = 6e-08 Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 17/210 (8%) Query: 38 KPVIIIDAGQQGGKESVMLA--LYVIEQLVAC--NDNS--EMIEKVKWVVLPSTNPDGME 91 KPV ++ G +E + A +Y+I Q + +D S E+++K+ ++++P N DG Sbjct: 137 KPVFFMNCGIHA-REWITPATCMYIITQFITKYRSDKSVTEVLDKMDFIIMPVLNADGYV 195 Query: 92 FARYLMPYWKKNLKPLDD---GPRL--GVDISRNFDKEWNSCPEVENKFSQIYPGAAAAS 146 + W+K KP G + G D +RN+ +W N S + G A S Sbjct: 196 YTWTGNRMWRKTRKPNIQSWWGQKTCYGTDPNRNWGYKWGLPGASSNPCSDTFRGKTAQS 255 Query: 147 ENETIFIQNALKKYQKNAKIYLSIRRDGHSIAYPYGYSKTAPSNEAKLKRVASEIATRVN 206 E E + LK K Y+ I P+GY+ + +L RV+ + Sbjct: 256 EVEVDNVAKFLKGLGPRVKGYMDIHAYSQFWMIPWGYTTANAKDHKELMRVSKIGVDAIR 315 Query: 207 QKTNGIYLFVNTS--IYELEG--KQYC-GH 231 Q Y + ++S IY+ G K Y GH Sbjct: 316 QTYGTAYRYGSSSNIIYKNSGSSKDYTYGH 345 >SB_62| Best HMM Match : Peptidase_M14 (HMM E-Value=2.7e-34) Length = 235 Score = 47.6 bits (108), Expect = 1e-05 Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 2/141 (1%) Query: 73 MIEKVKWVVLPSTNPDGMEFARYLMPYWKKNLKPLDDGPRLGVDISRNFDKEWNSCPEVE 132 M++K+ +V++P N DG + W+K KP G G D +RN+ +W Sbjct: 14 MLDKMDFVIMPILNVDGYVYTHTHNRMWRKTRKPY--GGCYGADPNRNWSFKWGGVGTSS 71 Query: 133 NKFSQIYPGAAAASENETIFIQNALKKYQKNAKIYLSIRRDGHSIAYPYGYSKTAPSNEA 192 + Y G SE E + + L + +K+ Y+ I +G+++ P Sbjct: 72 DPCRDTYRGPRPFSEVEALNVARYLYRNRKSLIGYMDIHAYSQLWMTSWGFNRAYPPAYN 131 Query: 193 KLKRVASEIATRVNQKTNGIY 213 + A + A +K G + Sbjct: 132 TKVKPAGQKAVEALRKVYGTH 152 >SB_49098| Best HMM Match : Peptidase_M14 (HMM E-Value=4.5e-12) Length = 290 Score = 37.9 bits (84), Expect = 0.010 Identities = 20/72 (27%), Positives = 33/72 (45%) Query: 136 SQIYPGAAAASENETIFIQNALKKYQKNAKIYLSIRRDGHSIAYPYGYSKTAPSNEAKLK 195 S IYPG+ SE ET + L K +K + Y+ G P+G++K P N + Sbjct: 11 SPIYPGSRPFSEVETRNVARYLYKKRKRLRAYVDFHSYGQLWMSPWGFTKKFPPNYRRHA 70 Query: 196 RVASEIATRVNQ 207 R + + + + Sbjct: 71 RAMNAVVKAIKR 82 >SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 561 Score = 33.9 bits (74), Expect = 0.16 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 5/96 (5%) Query: 31 EKAKEDLKPVIIIDAGQQGGKESVM-LALYVIEQLVACNDNSEMIEKVKWVVLPSTNPDG 89 E + + K + I + G+E ++ L Y+ E + +++ + +LPS NPDG Sbjct: 111 EPGEPEFKYIANIHGNEVVGRELLLQLIRYLCENYESHEKVRTLVDTTRIHILPSINPDG 170 Query: 90 MEFARYLMPYWKKNLKPLDDGPRLGVDISRNFDKEW 125 E A K K + GVD++RNF ++ Sbjct: 171 YELASVK----GKTHKFIGRRNAYGVDLNRNFPDQF 202 >SB_34368| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 542 Score = 33.1 bits (72), Expect = 0.28 Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%) Query: 29 EVEKAKEDLKPVIIIDAGQQGGKE-SVMLALYVIEQLVAC--NDN--SEMIEKVKWVVLP 83 +V+ A + KPV G + S +Y I+Q+V D+ + M++K+ +V+LP Sbjct: 469 QVKGAYKPNKPVFYWQCGIHAREWISPATCMYAIDQMVTKYGKDSGITSMLDKMDFVILP 528 Query: 84 STNPDGMEF 92 NPDG E+ Sbjct: 529 VVNPDGYEY 537 >SB_41552| Best HMM Match : RVT_1 (HMM E-Value=5.4e-32) Length = 1241 Score = 31.9 bits (69), Expect = 0.65 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 84 STNPDGMEFARYLMPYWKKNLKPLDDG--PRLGVDISRNFDKEWNSCPE 130 ST+P +E L PYW +PLDD P LG+ + W C + Sbjct: 933 STSPSSVEACYKLTPYWGNMFRPLDDPDYPWLGIWTTLPIMGVWYWCTD 981 >SB_37941| Best HMM Match : Peptidase_M14 (HMM E-Value=0) Length = 1328 Score = 31.5 bits (68), Expect = 0.86 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 7/96 (7%) Query: 31 EKAKEDLKPVIIIDAGQQGGKESVM-LALYVIEQLVACNDNSEMIEKVKWVVLPSTNPDG 89 E + ++K I + GKE ++ L Y+ +++++ + +LPS NPDG Sbjct: 115 EVKEPEMKYTANIHGNEVVGKEMLLHLIRYLCHNYGVNKRITDLVDSTRIHILPSLNPDG 174 Query: 90 MEFARYLMPYWKKNLKPLDDGPRLGVDISRNFDKEW 125 E A +K GVD++RNF ++ Sbjct: 175 YEMAA------QKTKTHTGTKNANGVDLNRNFPDQF 204 >SB_51769| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 71 Score = 31.1 bits (67), Expect = 1.1 Identities = 17/54 (31%), Positives = 25/54 (46%) Query: 151 IFIQNALKKYQKNAKIYLSIRRDGHSIAYPYGYSKTAPSNEAKLKRVASEIATR 204 +F + L + ++ A R D S A PY Y +TA AKL+ + A R Sbjct: 11 LFASDELFRMEELAICRFVTRTDSRSAANPYAYHRTAKLRHAKLRHFYTSSAAR 64 >SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0) Length = 1258 Score = 30.7 bits (66), Expect = 1.5 Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 1/64 (1%) Query: 31 EKAKEDLKPVIIIDAGQQGGKESVM-LALYVIEQLVACNDNSEMIEKVKWVVLPSTNPDG 89 E K + K + + + GKE ++ A Y+ + ++ ++ ++ + +LPS NPDG Sbjct: 681 EPGKPEFKYIANMHGNEVVGKEVLLTFAKYLCDNYKKDDEVTKALDTTRVHLLPSMNPDG 740 Query: 90 MEFA 93 E A Sbjct: 741 YELA 744 >SB_23547| Best HMM Match : NLPC_P60 (HMM E-Value=2.5) Length = 232 Score = 29.9 bits (64), Expect = 2.6 Identities = 36/164 (21%), Positives = 65/164 (39%), Gaps = 12/164 (7%) Query: 51 KESVMLALYVIEQLVACNDNSEMIEKVKWVVLPSTNPDGMEFARYLMPYWKKNLKPLD-- 108 +E++ +AL E++ +DN + +E +K + P + F R + + L LD Sbjct: 34 REAIPIALSW-EEIKTSSDNCDSVENMKEALKTGCTPFSLMFGREM----RTKLPQLDFT 88 Query: 109 -DGPRLGVDISRNFDKEWNSCPEVENKFSQIYPGAAAASENETIFIQNALKKYQKNAKIY 167 P L D R + + + + K S+I G NE Q L+ + K Y Sbjct: 89 ASDPELARDRDREYKLKLKKHADKKAKESEIKEGDTVLMRNEQ---QGKLEPNFRPEK-Y 144 Query: 168 LSIRRDGHSIAYPYGYSKTAPSNEAKLKRVASEIATRVNQKTNG 211 + ++G I T N K V + +V+++ G Sbjct: 145 KVVSKNGSDIVCESETGGTLRRNVQCAKNVPEATSEKVSKENQG 188 >SB_50158| Best HMM Match : Toxin_16 (HMM E-Value=2) Length = 746 Score = 29.5 bits (63), Expect = 3.5 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Query: 241 IPLCF-EMRVFLENN-NKIISKFHKMPRGFEASLRNGYFSGIRELYNVIVN 289 +PL + V L+NN N +S+ +++ + FEA+ R Y + N+I+N Sbjct: 17 LPLLLRDEHVTLQNNRNAALSRLNQLKKRFEAANRKQYREDYIQFMNIIIN 67 Score = 29.5 bits (63), Expect = 3.5 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Query: 241 IPLCF-EMRVFLENN-NKIISKFHKMPRGFEASLRNGYFSGIRELYNVIVN 289 +PL + V L+NN N +S+ +++ + FEA+ R Y + N+I+N Sbjct: 98 LPLLLRDEHVTLQNNRNAALSRLNQLKKRFEAANRKQYREDYIQFMNIIIN 148 >SB_15157| Best HMM Match : DUF1153 (HMM E-Value=1.7) Length = 412 Score = 29.5 bits (63), Expect = 3.5 Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 11/153 (7%) Query: 62 EQLVACNDNSEMIEKVKWVVLPSTNPDGMEFARYLMPYWKKNLKPLD---DGPRLGVDIS 118 E++ +DN + +E +K + P + F R + + L LD P L D Sbjct: 224 EEIKTSSDNCDSVENMKEALKTGCTPFSLMFGREM----RTKLPQLDFTASDPELARDRD 279 Query: 119 RNFDKEWNSCPEVENKFSQIYPGAAAASENETIFIQNALKKYQKNAKIYLSIRRDGHSIA 178 R + + + + K S+I G NE Q L+ + K Y + ++G I Sbjct: 280 REYKLKLKKHADKKAKESEIKEGDTVLMRNEQ---QGKLEPNFRPEK-YKVVSKNGSDIV 335 Query: 179 YPYGYSKTAPSNEAKLKRVASEIATRVNQKTNG 211 T N K+V + +V+++ G Sbjct: 336 CESETGGTLRRNVQCAKKVPEATSEKVSKENQG 368 >SB_27034| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 629 Score = 29.1 bits (62), Expect = 4.6 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%) Query: 126 NSCPEVENKFSQIYPGAAAASENETIFIQNALKKYQKNAKIYLSIRRDGHSIAYPYGYSK 185 NS E + F A +E T +++ +K+ K+ + + + R + PY Y K Sbjct: 344 NSLLEEDLNFDHTAVAAPPITEETTQNLEDIIKQRIKD-EAWDDVERKAKPVLQPYEYKK 402 Query: 186 TAPSNEAKLKRVASEI 201 P ++ K K S+I Sbjct: 403 KMPLDQEKSKLSLSQI 418 >SB_18998| Best HMM Match : Exo_endo_phos (HMM E-Value=1.1e-10) Length = 422 Score = 28.7 bits (61), Expect = 6.1 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 4/34 (11%) Query: 104 LKPLDDGPRLGVDISRNFDKEWNSCPEVENKFSQ 137 LKP++ P LGV++S D W+ + NK S+ Sbjct: 341 LKPVEHNPYLGVELSNTLDWSWH----INNKVSK 370 >SB_13109| Best HMM Match : Dynein_heavy (HMM E-Value=2.6e-09) Length = 1703 Score = 28.7 bits (61), Expect = 6.1 Identities = 16/59 (27%), Positives = 30/59 (50%) Query: 4 QLLDGDEASCIEDASIGSSAVVINKEVEKAKEDLKPVIIIDAGQQGGKESVMLALYVIE 62 +L DGD +E++ + V++ E+ L+P+++ +QGG + L VIE Sbjct: 1178 KLTDGDYIRTLENSIQFGNPVLLENVGEELDPSLEPLLLKQTFKQGGVVCIRLGESVIE 1236 >SB_59792| Best HMM Match : RVT_1 (HMM E-Value=4.2039e-45) Length = 565 Score = 28.3 bits (60), Expect = 8.0 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 3/67 (4%) Query: 179 YPYGYSKTAPSNEAKLKRVASEIATRVNQKTNGIYLFVNTSIYELEGKQYCG---HSVDY 235 Y + Y PS + K + ++I + NQ I T+ + + K YC ++Y Sbjct: 360 YHHSYLGVLPSGDLKWDKHIAQITSSANQTLGVIRRNFRTASVDCKSKLYCSLVRPKLEY 419 Query: 236 ANDLGIP 242 AN P Sbjct: 420 ANSAWYP 426 >SB_24812| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1384 Score = 28.3 bits (60), Expect = 8.0 Identities = 14/45 (31%), Positives = 23/45 (51%) Query: 248 RVFLENNNKIISKFHKMPRGFEASLRNGYFSGIRELYNVIVNQKK 292 RV L++ NK +F KM ++G +RE + I+N+ K Sbjct: 415 RVELDDRNKSTLEFKKMEEDLRVKGKDGLSGQLREEFEKILNEHK 459 >SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) Length = 5087 Score = 28.3 bits (60), Expect = 8.0 Identities = 18/62 (29%), Positives = 31/62 (50%) Query: 15 EDASIGSSAVVINKEVEKAKEDLKPVIIIDAGQQGGKESVMLALYVIEQLVACNDNSEMI 74 E+AS + I KE E+ E + V+ +AG++ +E V + + + + SE I Sbjct: 1622 EEASALGISEEIEKETEETVEQHEEVVESEAGEKVEEEEVPAVVVALSEEASALGISEEI 1681 Query: 75 EK 76 EK Sbjct: 1682 EK 1683 >SB_6367| Best HMM Match : Seryl_tRNA_N (HMM E-Value=0.84) Length = 563 Score = 28.3 bits (60), Expect = 8.0 Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 2/96 (2%) Query: 130 EVENKFSQIYPGAAAASENETIFIQNALKKYQKNAKIYLSIRRDGHSIAYPYGYSKTAPS 189 +VE+ F+ + A + ET + YQ++ R G A+ G SK+A S Sbjct: 116 QVESMFNALLDMRKGARKMETACAETQTVIYQEDGSTQWEERDIGPMRAH--GTSKSASS 173 Query: 190 NEAKLKRVASEIATRVNQKTNGIYLFVNTSIYELEG 225 N+A+ + ++ ++K VNT L G Sbjct: 174 NKARDVAMVDDVVGLTSEKNGESVTEVNTDKKVLTG 209 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.316 0.135 0.392 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,258,607 Number of Sequences: 59808 Number of extensions: 430919 Number of successful extensions: 915 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 9 Number of HSP's that attempted gapping in prelim test: 896 Number of HSP's gapped (non-prelim): 24 length of query: 298 length of database: 16,821,457 effective HSP length: 82 effective length of query: 216 effective length of database: 11,917,201 effective search space: 2574115416 effective search space used: 2574115416 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.6 bits) S2: 60 (28.3 bits)
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