GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001892-TA|BGIBMGA001892-PA|IPR000834|Peptidase M14,
carboxypeptidase A
         (298 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.1  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    22   4.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   8.4  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 13/48 (27%), Positives = 22/48 (45%)

Query: 152 FIQNALKKYQKNAKIYLSIRRDGHSIAYPYGYSKTAPSNEAKLKRVAS 199
           FI+N  +  +  A++ L  R +   I + +      P N   LK +AS
Sbjct: 391 FIRNDQESAEATAELKLGGRFEPPQIRHAFNEETVQPGNSVFLKCIAS 438


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/15 (60%), Positives = 11/15 (73%)

Query: 26  INKEVEKAKEDLKPV 40
           + +EVEKAK DL  V
Sbjct: 90  LRREVEKAKRDLSSV 104


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 141 GAAAASENETIFIQNALKK 159
           GAA  S+  T+F+ + +KK
Sbjct: 74  GAAVVSKGTTLFMTSQIKK 92


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 141 GAAAASENETIFIQNALKK 159
           GAA  S+  T+F+ + +KK
Sbjct: 74  GAAVVSKGTTLFMTSQIKK 92


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)

Query: 205 VNQKTNGIYLFVNTSIYELEGKQ 227
           + +  NGIYL+ +  +  LEG++
Sbjct: 4   LGESPNGIYLYHDGRVKLLEGRR 26


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.135    0.392 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,771
Number of Sequences: 317
Number of extensions: 3215
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 5
length of query: 298
length of database: 114,650
effective HSP length: 56
effective length of query: 242
effective length of database: 96,898
effective search space: 23449316
effective search space used: 23449316
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 43 (21.4 bits)