Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001891-TA|BGIBMGA001891-PA|IPR000834|Peptidase M14,
carboxypeptidase A, IPR009020|Proteinase inhibitor, propeptide
(418 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr 2... 115 1e-26
SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase Rdp1|Schizosa... 30 0.70
SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomy... 27 3.7
SPBC27.08c |sua1|SPBC28F2.01c|sulfate adenylyltransferase |Schiz... 27 3.7
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 4.9
SPAP27G11.05c |vps41||vacuolar protein sorting-associated protei... 27 6.5
SPBC25D12.04 |suc22||ribonucleotide reductase small subunit Suc2... 27 6.5
SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein Ubr1|Sc... 26 8.6
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 26 8.6
SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit Nse6|Schizosa... 26 8.6
SPAC18B11.09c |||N-acetyltransferase |Schizosaccharomyces pombe|... 26 8.6
SPCC290.02 |rpc34||DNA-directed RNA polymerase III complex subun... 26 8.6
>SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 497
Score = 115 bits (276), Expect = 1e-26
Identities = 71/249 (28%), Positives = 128/249 (51%), Gaps = 23/249 (9%)
Query: 111 YNSHAAIQDYLDTVAKRHPDLVRLQVLGTSYQGRVMRLVKISTNPSAGN-------PIIF 163
Y + +I +L +A + DL L +G + +GR + +K++ + N +I
Sbjct: 183 YQNLESINSWLRLMASLYKDLSELVPVGITAEGRTILGLKLNGRHPSDNGEKIRNKKVII 242
Query: 164 IDAGIHAREWVAPAMALYVIHRLI----NDPEAKNDLNGVDWYILPVVNPDGYEYTRNSR 219
I G HAREW+ Y +L+ +D + L+ +W +PV+N DGYEYT +
Sbjct: 243 IQGGSHAREWIGIPSVCYAAWQLLAKYDSDGHVRKLLDKFEWIFIPVLNVDGYEYTWS-- 300
Query: 220 NNRLWRKTRS--KHANCYGVDGNRNYGFKWAVSGVSYNPCNKETYAGPEPFSEPETQIVR 277
N+RLW K R ++ C+G++ + N+ F + +G + +PC+ E Y G PF ET +
Sbjct: 301 NDRLWSKNRQPLNNSECFGINLDANWAFGF--NG-NIDPCSNE-YGGLSPFQANETMALF 356
Query: 278 NIMMENA----KRMKLYVSIHSYGQYLVYPWGYTGDFLPKEWKKLDSLARAVSDAIQRVG 333
N++ E+ K++ ++ +HSY Q +++P+ YT D P + + + LA + + RV
Sbjct: 357 NLITESLSQEQKKVVGFLDVHSYSQSVLWPYAYTCDLFPPDTENFEELAIGLVKELHRVN 416
Query: 334 GQPFKVMSA 342
+ + A
Sbjct: 417 SRYYTYQQA 425
>SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase
Rdp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1215
Score = 29.9 bits (64), Expect = 0.70
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 5/115 (4%)
Query: 36 RFEDVDNQVEILKQSRGINDSLDLIVPPNKLDYVQSYAQNTNLTYEIKRRNYGRSFESPE 95
+F+ + +E++K SR N L++ + + ++ + E+ R + ES
Sbjct: 676 KFKSFHSTLEVIKISRFSNAHLNMQL----ITLLEGLGVEKTVFLELTRSQLSKMNESIN 731
Query: 96 RVPRRRLLRGLNVFEYNSHAAIQDYLDTVAKRHPDLVRLQVLGTSYQGRVMRLVK 150
+ L+ NV EY+S I D++ D +L Y+ V+RL+K
Sbjct: 732 SKQKSILMLRDNVDEYHSTLIIADFIQAGFLERDDAFTENLLNLYYEW-VLRLIK 785
>SPAC26A3.12c |dhp1||5'-3' exoribonuclease Dhp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 991
Score = 27.5 bits (58), Expect = 3.7
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 5 LLKDLIEIIHLCSYTLIRLFPETTSQLENITRFEDVDNQVEILKQSRGINDSLDLIVPPN 64
L D+ I+H CS+ R PET ++ + FE D + +++ + + ++D + P
Sbjct: 52 LYLDMNGIVHPCSHPEDRPAPETEDEM-MVAVFEYTDRILAMVRPRQLLFIAIDGVAPRA 110
Query: 65 KLDYVQS 71
K++ +S
Sbjct: 111 KMNQQRS 117
>SPBC27.08c |sua1|SPBC28F2.01c|sulfate adenylyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 27.5 bits (58), Expect = 3.7
Identities = 16/64 (25%), Positives = 23/64 (35%)
Query: 53 INDSLDLIVPPNKLDYVQSYAQNTNLTYEIKRRNYGRSFESPERVPRRRLLRGLNVFEYN 112
+ L + P D+V+ L + +R N+ R R P R R L V
Sbjct: 152 VGGKLQAVTPIRHFDFVEYRYSPAQLRSDFQRNNWNRVVAFQTRNPMHRAHRELTVRAAK 211
Query: 113 SHAA 116
H A
Sbjct: 212 QHGA 215
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 31 LENITRFEDVDNQVEILKQSRGINDSLDLIVPPNKLDYVQSYA 73
L I E +DN V IL+ GI++ + +++ L Y+QS+A
Sbjct: 85 LLEIASREFMDNLVSILRSPAGIDEDVKMVI----LRYIQSWA 123
>SPAP27G11.05c |vps41||vacuolar protein sorting-associated protein
Vps41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 886
Score = 26.6 bits (56), Expect = 6.5
Identities = 9/45 (20%), Positives = 25/45 (55%)
Query: 54 NDSLDLIVPPNKLDYVQSYAQNTNLTYEIKRRNYGRSFESPERVP 98
++S ++ PN + YV+ Q ++ Y + + Y + ++ +++P
Sbjct: 338 SNSHSFVISPNDIVYVRERNQIDHVKYLVSKEMYAEAIDAVKKLP 382
>SPBC25D12.04 |suc22||ribonucleotide reductase small subunit Suc22
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 391
Score = 26.6 bits (56), Expect = 6.5
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 53 INDSLDLIVPPNKLDYVQSYAQNTNLTY-----EIKRRNYGRSFESPERVPRRRLLRGLN 107
I+ S DL+ NKL+ + Y +T L Y I N F S ++P R + G
Sbjct: 103 IDLSKDLVDWDNKLNADERYFISTVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQ 162
Query: 108 VFEYNSHAAIQDYLDTVAKRHP 129
+ N H+ L R P
Sbjct: 163 IMIENIHSETYSLLLDTYIREP 184
>SPBC19C7.02 |ubr1|SPBC32F12.14|N-end-recognizing protein
Ubr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1958
Score = 26.2 bits (55), Expect = 8.6
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 27 TTSQLENITRFEDVDNQVEILKQSRGINDSLDLIVPPNKLDYVQ----SYAQNTNLTYE- 81
T L +FE +V + + GINDS + DYV Y++N E
Sbjct: 884 TCEHLLEHKQFESTLKKVATFRNAEGINDSGSFTLKDEYFDYVDPFNIHYSRNQREEAEN 943
Query: 82 IKRRNYGR 89
I RR Y +
Sbjct: 944 ILRRRYSK 951
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 26.2 bits (55), Expect = 8.6
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 278 NIMMENAKRMKLYVSIHSYGQYLVYPWGYTGDFLPKEWKKLDSLARAVSDAIQRVGGQPF 337
+++ME+ K + + +I S Q+L T D+LP K R +++ I R+
Sbjct: 343 HLLMEDVKNLSIR-NISSIPQFLSLSEEQTKDYLPNYSKNQLKEMREIANGIPRISVVAA 401
Query: 338 KVM 340
KV+
Sbjct: 402 KVL 404
>SPAC11E3.08c |nse6||Smc5-6 complex non-SMC subunit
Nse6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 522
Score = 26.2 bits (55), Expect = 8.6
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 11/97 (11%)
Query: 33 NITRFEDVDNQVEILKQSRGINDSLDL--------IVPPNKLDYVQSYAQNTNLTYEIKR 84
NI++F D+DN +++ +DS +L +VP + + Y +N + R
Sbjct: 6 NISKFPDLDNSSKLIDHILDSDDSEELDELPDISSLVPSARAQSRKQYLKNDSSNSSTYR 65
Query: 85 RN---YGRSFESPERVPRRRLLRGLNVFEYNSHAAIQ 118
N + + V +RR L N+ +Y+S Q
Sbjct: 66 WNIDLLSSTATIDDSVAKRRKLAVQNLLQYDSTQTFQ 102
>SPAC18B11.09c |||N-acetyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 207
Score = 26.2 bits (55), Expect = 8.6
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 20 LIRLFPETTSQLENITRFEDVDNQVEILKQSRGIND-SLDLIVPPNKLDY 68
L+R F +T LEN+ E + + E+L + ++ S I PP DY
Sbjct: 42 LMRRFNDTMGDLENVGPAELIKRRAELLAEVFVFDESSAPEIEPPMAFDY 91
>SPCC290.02 |rpc34||DNA-directed RNA polymerase III complex subunit
Rpc34|Schizosaccharomyces pombe|chr 3|||Manual
Length = 301
Score = 26.2 bits (55), Expect = 8.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 212 YEYTRNSRNNRLWRKTRSKHANCY 235
Y + +NS N +WRKT + N +
Sbjct: 91 YSFIKNSGNEGIWRKTLTLRTNLH 114
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.321 0.138 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,038,431
Number of Sequences: 5004
Number of extensions: 89293
Number of successful extensions: 235
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 228
Number of HSP's gapped (non-prelim): 12
length of query: 418
length of database: 2,362,478
effective HSP length: 75
effective length of query: 343
effective length of database: 1,987,178
effective search space: 681602054
effective search space used: 681602054
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
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