Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001891-TA|BGIBMGA001891-PA|IPR000834|Peptidase M14,
carboxypeptidase A, IPR009020|Proteinase inhibitor, propeptide
(418 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0141 + 1017654-1017745,1018332-1018389,1018485-1018595,101... 57 2e-08
10_06_0006 - 9496990-9497592,9497695-9497802,9497884-9497997,949... 32 0.98
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 30 3.0
06_01_0324 - 2357432-2357724,2358042-2358105,2358321-2358404,235... 30 4.0
06_03_1013 - 26896690-26896818,26897051-26897089,26897178-268973... 29 9.2
03_05_1111 - 30479793-30479823,30479887-30479978,30480261-304804... 29 9.2
01_01_0450 - 3344203-3344259,3344339-3344506,3344743-3344956,334... 29 9.2
>02_01_0141 +
1017654-1017745,1018332-1018389,1018485-1018595,
1018853-1018990,1019559-1019628,1019711-1019766,
1020203-1020328,1020648-1020787,1020932-1021004,
1021095-1021169,1021277-1021591
Length = 417
Score = 57.2 bits (132), Expect = 2e-08
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 12/203 (5%)
Query: 111 YNSHAAIQDYLDTVAKRHPDLVRLQVLGTSYQGRVMRLVKISTN---PSAGNPI---IFI 164
Y+S ++ + + RHPD + + + S +G L ++ N S N + +
Sbjct: 28 YHSSDSLLSDIKALVARHPDKLSMDTITASNKGYSTDLFIVTFNHAKESTSNSSKIHVLL 87
Query: 165 DAGIHAREWVAPAMALYVIHRLINDPE-AKNDLNGVDWYILPVVNPDGYEYTRNSRNNRL 223
G H RE + +AL +++ L + A DL+ + + +V N R R+
Sbjct: 88 SFGQHGRELITSEVALNLLYILTEKRKIAGVDLSSFEKILENLVIKVVPMENLNGRK-RV 146
Query: 224 WRKTRSKHANCYGVDGNRNYGFKWAVSGVSYNPCNKETYAGPEPFSEPETQIVRNIMMEN 283
N GVD NRN+ W Y+P E G PFSEPE QI+R +
Sbjct: 147 EEGELCDRRNGRGVDLNRNWSVDWGKKEKDYDPY--EENPGTAPFSEPEAQIMRE--LSK 202
Query: 284 AKRMKLYVSIHSYGQYLVYPWGY 306
+ + ++V++HS + L P+ +
Sbjct: 203 SFKPHMWVNVHSGMEALFMPYDH 225
>10_06_0006 -
9496990-9497592,9497695-9497802,9497884-9497997,
9498170-9498219,9498346-9498434,9498542-9498738,
9498877-9499038,9499337-9499455,9499579-9499666,
9499744-9499849,9499968-9500056,9500167-9500319,
9500434-9500526,9500625-9500691,9500811-9500923,
9501544-9501639,9501782-9501961
Length = 808
Score = 31.9 bits (69), Expect = 0.98
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 70 QSYAQNTNLTYEIKRRNYGRSFE 92
Q Y+ N N T+++K NYG SFE
Sbjct: 519 QQYSPNENFTFQLKSPNYGGSFE 541
>01_06_0893 - 32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 30.3 bits (65), Expect = 3.0
Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 4/115 (3%)
Query: 212 YEYTRNSRNNRLWRKTRSKHANCYGVDGNRNYGFKWAVSGVSYNPCNKETYAGPEPFSE- 270
++ T+ + + WR + A C G +G P N +Y P P E
Sbjct: 1070 HQMTKGDAHTQSWRDNSYQQAGCSGTGEQGEFGGLQYRQFQREIPTNLVSYQLPGPVGEE 1129
Query: 271 -PETQIVRNIMMENAKRMKL-YVSIHSYGQYLVYPWGYTGDFLPKEWKKLDSLAR 323
P I+ +++ E + ++H Y L P+ G+ + E + S R
Sbjct: 1130 FPHLDIINDLLEEEQSSGSMAEPTLHGY-HTLGLPYSSRGNLVDSEVTSISSSGR 1183
>06_01_0324 -
2357432-2357724,2358042-2358105,2358321-2358404,
2358638-2358715,2359298-2359360,2359459-2359561,
2359675-2359800,2360212-2360258,2361284-2361388,
2361483-2361605,2361759-2361854,2362052-2362141,
2362759-2362815,2362899-2363028,2363613-2363708,
2363815-2363875,2364391-2364490
Length = 571
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 178 MALYVIHRLINDPEAKNDLNGVDWYILPVVNPDGYEYTRNSRNNRL 223
+A ++ + DP A + + +ILP +NPDG+ R N +
Sbjct: 197 LANWLCDNYLKDPLATLIVKNMHLHILPTMNPDGFALRRRGNANNV 242
>06_03_1013 -
26896690-26896818,26897051-26897089,26897178-26897300,
26897822-26897902,26898048-26898138,26898325-26898396,
26898474-26898574,26899211-26899309,26899942-26900286
Length = 359
Score = 28.7 bits (61), Expect = 9.2
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 11/63 (17%)
Query: 39 DVDNQVEILKQSRGINDSLDLIVPPNKLDYVQSYAQNTNLTYEIKRRN---YGRSFESPE 95
DVDNQ +L ++DS VP + DYV +Y TN+++ R+ +G SPE
Sbjct: 170 DVDNQFFVL-----LSDSC---VPLHTFDYVYNYLMGTNISFIDCFRDPGPHGNGRYSPE 221
Query: 96 RVP 98
+P
Sbjct: 222 MLP 224
>03_05_1111 -
30479793-30479823,30479887-30479978,30480261-30480410,
30482229-30482354,30482563-30482628,30483134-30483214,
30483310-30483422,30483553-30483721,30484253-30484330,
30485489-30485752,30486239-30486379,30486548-30486759,
30486819-30486940,30487281-30487398,30487925-30487997
Length = 611
Score = 28.7 bits (61), Expect = 9.2
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 5 LLKDLIEI--IHLCSYTLIRLFPETTSQLENITRFEDVDNQVEILKQSRGINDSLDL 59
+LK IE+ HLCS L PET + + T F D D+ + +L S I L+L
Sbjct: 308 MLKRRIEMGGKHLCSVVYGSLPPET--RTKQATMFNDQDSNLNVLVASDAIGMGLNL 362
>01_01_0450 -
3344203-3344259,3344339-3344506,3344743-3344956,
3345039-3345101,3345582-3345769,3345846-3346029,
3346535-3346606,3346676-3346787,3346878-3346953,
3347050-3347100,3347179-3347260,3347331-3347567,
3347650-3347772,3348141-3348326,3348680-3349625,
3350426-3350551,3350683-3350811,3350918-3351049,
3351167-3351301,3351450-3351575,3352080-3352148,
3352149-3352205,3352302-3352436,3352600-3352704,
3352841-3352906,3353333-3353503,3353806-3353983
Length = 1395
Score = 28.7 bits (61), Expect = 9.2
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 67 DYVQSYAQNTNLTYEIKRRNYGRSFESPERVPR-RRLLRGLNVFEYNSHAAIQDYLDTV 124
+Y+ +++ NT+ KRR GR+ SP + PR R + YNS +D D V
Sbjct: 757 NYIDTHSVNTDYLAGEKRRFGGRNSISPFKRPRSSRCTIFFTLLTYNSCDQTEDVTDEV 815
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.321 0.138 0.427
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,457,252
Number of Sequences: 37544
Number of extensions: 524240
Number of successful extensions: 974
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 969
Number of HSP's gapped (non-prelim): 8
length of query: 418
length of database: 14,793,348
effective HSP length: 84
effective length of query: 334
effective length of database: 11,639,652
effective search space: 3887643768
effective search space used: 3887643768
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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