GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001891-TA|BGIBMGA001891-PA|IPR000834|Peptidase M14,
carboxypeptidase A, IPR009020|Proteinase inhibitor, propeptide
         (418 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   8.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   8.5  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 265 PEPFSEPETQIVRNIMMENAKR 286
           P+P    E   +RNI+++N K+
Sbjct: 192 PQPIESFEAAGLRNIVLDNIKK 213


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 8.5
 Identities = 11/46 (23%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 22  RLFPETTSQLENITRFEDVDNQVEILKQSRGIND----SLDLIVPP 63
           ++FP  T  +EN+ R  D      + + ++G +      + ++VPP
Sbjct: 538 KVFPNGTLIIENVERMSDQATYTCVARNAQGYSARGTLEVQVMVPP 583


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.138    0.427 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,825
Number of Sequences: 429
Number of extensions: 6050
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 2
length of query: 418
length of database: 140,377
effective HSP length: 59
effective length of query: 359
effective length of database: 115,066
effective search space: 41308694
effective search space used: 41308694
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)