Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001890-TA|BGIBMGA001890-PA|IPR000834|Peptidase M14,
carboxypeptidase A
(353 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr 2... 72 1e-13
SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|c... 32 0.11
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 29 0.75
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 29 1.3
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 28 1.7
SPAC1782.03 |||microfibrillar-associated protein family protein|... 27 3.0
SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr ... 27 4.0
SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomy... 27 5.3
SPBC36B7.07 |tlg1||SNARE Tgl1|Schizosaccharomyces pombe|chr 2|||... 27 5.3
SPBC800.07c |tsf1||mitochondrial translation elongation factor E... 26 7.0
SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase |Schizosacc... 26 9.3
>SPBC337.07c |||carboxypeptidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 497
Score = 72.1 bits (169), Expect = 1e-13
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 30/224 (13%)
Query: 89 DEIPEKKVLFIV---HGLNILGINNLRCLINTKALAILLS--YYFEHLDKFDIFFIPLAN 143
++I KKV+ I H +GI ++ C + LA S + + LDKF+ FIP+ N
Sbjct: 233 EKIRNKKVIIIQGGSHAREWIGIPSV-CYAAWQLLAKYDSDGHVRKLLDKFEWIFIPVLN 291
Query: 144 PDGYTFLGNSQHIWNKNIAPQN--DCPGVFLDRNFDVAWNVSSINSCSQLYPGEQPFSEV 201
DGY + ++ +W+KN P N +C G+ LD N+ +N +I+ CS Y G PF
Sbjct: 292 VDGYEYTWSNDRLWSKNRQPLNNSECFGINLDANWAFGFN-GNIDPCSNEYGGLSPFQAN 350
Query: 202 ETRAIRGI----LHRYSHKIIAYFNVHVGSINHRVIKGDAVLYPNGYT-DVQIDDDKYFD 256
ET A+ + L + K++ + +VH S +VL+P YT D+ D + F+
Sbjct: 351 ETMALFNLITESLSQEQKKVVGFLDVHSYS--------QSVLWPYAYTCDLFPPDTENFE 402
Query: 257 -----LKAEIEEA-MKNSSFQNAAVQVETLQNWYGKISGTSVDY 294
L E+ + ++Q A + + Y + GT++D+
Sbjct: 403 ELAIGLVKELHRVNSRYYTYQQACIPYDGFHKHY--LPGTAIDW 444
>SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 216
Score = 32.3 bits (70), Expect = 0.11
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 242 NGYTDVQIDDDKYFDLKAEIEEAMKNSSFQNAAVQVETLQNWYGKISGT 290
N Y + D K +L AEI+ M N Q A+ + +TLQ +G ++G+
Sbjct: 156 NHYDETASQDLKLRELSAEIDTEMSNFRTQLASFKTQTLQWVFGIVTGS 204
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 29.5 bits (63), Expect = 0.75
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 28 KLSPYTIKQQILEIMSAFPNANVT-YEVIGRTASYNDILLLKVTELKRDITRYFRANKNK 86
KL P + IL +S F N+ VT Y NDIL+L+V R + RY R N
Sbjct: 810 KLDPDDV-YNILSFLS-FANSQVTSYTPPNSIDRPNDILILEVAPFVRCMRRYDRIRLNS 867
Query: 87 Y 87
Y
Sbjct: 868 Y 868
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 28.7 bits (61), Expect = 1.3
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 113 CLINTKALAILLSYYFEHLDKFDIFFIPLANPDGYTFLGNSQHI--WNKN-IAPQNDCPG 169
CL ++++ +I + + +D + LA P G + N+ HI NK IA Q PG
Sbjct: 449 CLASSRSTSISRKNRYTDIVPYDKTRVRLAVPKGCSDYINASHIDVGNKKYIACQAPKPG 508
Query: 170 VFLDRNFDVAWNVSSIN 186
LD +++ W+ S N
Sbjct: 509 TLLD-FWEMVWHNSGTN 524
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 314 NGQPKEKPSTQTLALSEIWKRVI-DTTFNFISRRTNNTEM 352
N + K++ S+ TL E K DTTFNF+ RR N ++
Sbjct: 512 NSRLKQQLSSITLPSVEYGKLTFNDTTFNFMERRPRNFDV 551
>SPAC1782.03 |||microfibrillar-associated protein family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 355
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/35 (31%), Positives = 24/35 (68%)
Query: 5 QLLQHASFEDSTDTNLTKGITSQKLSPYTIKQQIL 39
+++++ + + DT + K +TSQK+ TIK+++L
Sbjct: 134 KVIKNRAKANEEDTEVLKKVTSQKILEETIKRELL 168
>SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1026
Score = 27.1 bits (57), Expect = 4.0
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 5/126 (3%)
Query: 12 FEDSTDTNLTKGITSQKLSPYTIKQQILEIMSAFPNANVTYEVIGRTASYNDILLLKVTE 71
++ +DT LT+GI + T+ I + + N+ + I ++ + L+ E
Sbjct: 647 YDGLSDTKLTEGILLKLKDLKTVDYSISVLSYVWNNSGKVMQGIIKSMLSRTLELISPEE 706
Query: 72 LKRDITRYFRANKNKYVDEIPEKKVLFIVHGLNILG-INNLR-CLINTKALAILLSYYFE 129
L+R I YF + +K+V H L IL I +LR + L L SY +
Sbjct: 707 LQRLIYYYFEFFTTTGGEYYLKKEV---QHSLYILSLIVSLRPSAFDVSQLKFLSSYLLQ 763
Query: 130 HLDKFD 135
+ D
Sbjct: 764 KSESMD 769
>SPBC18H10.12c |rpl701||60S ribosomal protein L7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 251
Score = 26.6 bits (56), Expect = 5.3
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 53 EVIGRTASYNDILLLKVTELKRDITRYFRANKNKYVDEIPEKKVLFIVHGLNILGINNL 111
E+I + A D K + ++ R RA N YV + E K++F++ I GINN+
Sbjct: 50 ELIAKRAESYDAEYRKAEREQIELGRKARAEGNYYVPD--ETKLVFVI---RIRGINNI 103
>SPBC36B7.07 |tlg1||SNARE Tgl1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 225
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Query: 234 KGDAVLYPNGYTDVQIDD--DKYFDLKAEIEEAMKNS 268
+ VL PN ID+ + DLKA +E AMKNS
Sbjct: 30 RNSGVLSPNTELTYAIDELSETLKDLKAAVEIAMKNS 66
>SPBC800.07c |tsf1||mitochondrial translation elongation factor
EF-Ts Tsf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 299
Score = 26.2 bits (55), Expect = 7.0
Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Query: 182 VSSINSCSQLYPGEQPFSEVETRAIRGILHRYSHKIIAYFNVHVGSINHRVIKGDAVLYP 241
++ IN S PF ++ R LH Y + ++V ++ + ++K A +
Sbjct: 108 MAEINCESDFVAQTTPFQDLARRIASTFLH-YLPTNHSSYSVEA-TLKNEILKHQAYVSK 165
Query: 242 NGYTDVQIDDDKYFDLKAEIEEAMKNSSFQNAAVQVETLQNWYGKISGTSV 292
N + + D ++ E EE +K +SF VQV+ L ++ T++
Sbjct: 166 NHEAN---EKDVSSNVSLE-EEIVKMTSFTGEKVQVQRLHCMNARVPSTAI 212
>SPAC13C5.05c |||N-acetylglucosamine-phosphate mutase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 518
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 286 KISGTSVDYASTIY---GIPFAMELVMQTYANGQPKE 319
KIS V Y + + G+PF++ +V YANG E
Sbjct: 291 KISTALVGYLNILVKKSGMPFSLGVVQTAYANGASTE 327
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.135 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,719,432
Number of Sequences: 5004
Number of extensions: 75446
Number of successful extensions: 195
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 189
Number of HSP's gapped (non-prelim): 12
length of query: 353
length of database: 2,362,478
effective HSP length: 73
effective length of query: 280
effective length of database: 1,997,186
effective search space: 559212080
effective search space used: 559212080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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