Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001890-TA|BGIBMGA001890-PA|IPR000834|Peptidase M14,
carboxypeptidase A
(353 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37943| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 75 1e-13
SB_49100| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 71 1e-12
SB_62| Best HMM Match : Peptidase_M14 (HMM E-Value=2.7e-34) 70 3e-12
SB_24088| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 6e-12
SB_15763| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_49098| Best HMM Match : Peptidase_M14 (HMM E-Value=4.5e-12) 43 4e-04
SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 35 0.11
SB_35588| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.61
SB_37941| Best HMM Match : Peptidase_M14 (HMM E-Value=0) 32 0.81
SB_9115| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.9
SB_34368| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.3
SB_32575| Best HMM Match : SNF7 (HMM E-Value=1.1) 29 5.7
SB_21191| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 10.0
>SB_37943| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 249
Score = 74.5 bits (175), Expect = 1e-13
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 131 LDKFDIFFIPLANPDGYTFL--GNSQHIWNKNIAPQND--CPGVFLDRNFDVAWNV--SS 184
LDK D P+ NPDGY F S +W K+ P + C G L+RNF W SS
Sbjct: 110 LDKMDFIIHPMVNPDGYVFTHKNESNRLWRKSRKPTSKAGCIGADLNRNFGYQWGKPGSS 169
Query: 185 INSCSQLYPGEQPFSEVETRAIRGILHRYSHKIIAYFNVHVGSINHRVIKGDAVLYPNGY 244
CS +Y GE P+SEVE + + L + + + Y ++H G +YP GY
Sbjct: 170 DKPCSFIYRGEAPYSEVEVKNMAAFLWKLAPNLKGYLDIH--------SYGQLWMYPWGY 221
Query: 245 TDVQIDDDKYFD 256
T+ +K D
Sbjct: 222 TNQSTQVEKEMD 233
>SB_49100| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 313
Score = 71.3 bits (167), Expect = 1e-12
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 2/118 (1%)
Query: 131 LDKFDIFFIPLANPDGYTFLGNSQHIWNKNIAPQNDCPGVFLDRNFDVAWNV--SSINSC 188
LD ++ +P+ N DGY + +W K P C GV +RNF+ + V +S N C
Sbjct: 108 LDNYEWVILPVLNVDGYEYTRTKDRMWRKTRTPGTKCVGVDPNRNFNYRFGVTGTSNNEC 167
Query: 189 SQLYPGEQPFSEVETRAIRGILHRYSHKIIAYFNVHVGSINHRVIKGDAVLYPNGYTD 246
SQ+Y G+Q FSE T + L+ H++ Y + H S G P+ YT+
Sbjct: 168 SQIYRGKQAFSEKVTYNVAKFLYENRHRLKGYIDFHAYSQMFLSPWGYTDAKPSNYTE 225
>SB_62| Best HMM Match : Peptidase_M14 (HMM E-Value=2.7e-34)
Length = 235
Score = 69.7 bits (163), Expect = 3e-12
Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Query: 131 LDKFDIFFIPLANPDGYTFLGNSQHIWNKNIAPQNDCPGVFLDRNFDVAWN--VSSINSC 188
LDK D +P+ N DGY + +W K P C G +RN+ W +S + C
Sbjct: 15 LDKMDFVIMPILNVDGYVYTHTHNRMWRKTRKPYGGCYGADPNRNWSFKWGGVGTSSDPC 74
Query: 189 SQLYPGEQPFSEVETRAIRGILHRYSHKIIAYFNVHVGSINHRVIKGDAVLYPNGY 244
Y G +PFSEVE + L+R +I Y ++H S G YP Y
Sbjct: 75 RDTYRGPRPFSEVEALNVARYLYRNRKSLIGYMDIHAYSQLWMTSWGFNRAYPPAY 130
>SB_24088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 68.9 bits (161), Expect = 6e-12
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 131 LDKFDIFFIPLANPDGYTFLGNSQHIWNKNIAPQND--CPGVFLDRNFDVAWNV--SSIN 186
LDK D +P+ NPDGY F Q W K + P + C G +RN+D W +S +
Sbjct: 50 LDKMDFVIMPVLNPDGYVFTWERQRFWRKTLKPNSGTFCVGTDPNRNWDYKWGAEGASTD 109
Query: 187 SCSQLYPGEQPFSEVETRAIRGILHRYSHKIIAYFNVHVGS 227
C+ Y G FSE+E + L + +I Y ++H S
Sbjct: 110 PCADDYRGPHAFSEIEIVNVAKYLKKLGDRIKGYMDIHAYS 150
>SB_15763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 60.5 bits (140), Expect = 2e-09
Identities = 64/233 (27%), Positives = 97/233 (41%), Gaps = 26/233 (11%)
Query: 91 IPEKKVLFIVHGLNILG-INNLRCL-INTKALAILLS--YYFEHLDKFDIFFIPLANPDG 146
+PEK V F+ G++ I C+ I T+ + S E LDK D +P+ N DG
Sbjct: 134 LPEKPVFFMNCGIHAREWITPATCMYIITQFITKYRSDKSVTEVLDKMDFIIMPVLNADG 193
Query: 147 YTFLGNSQHIWNKNIAP-------QNDCPGVFLDRNFDVAWNV--SSINSCSQLYPGEQP 197
Y + +W K P Q C G +RN+ W + +S N CS + G+
Sbjct: 194 YVYTWTGNRMWRKTRKPNIQSWWGQKTCYGTDPNRNWGYKWGLPGASSNPCSDTFRGKTA 253
Query: 198 FSEVETRAIRGILHRYSHKIIAYFNVHVGSINHRVIKGDAVLYPNGYTDVQIDDDKYFDL 257
SEVE + L ++ Y ++H S + P GYT D K
Sbjct: 254 QSEVEVDNVAKFLKGLGPRVKGYMDIHAYS--------QFWMIPWGYTTANAKDHKELMR 305
Query: 258 KAEI-EEAMKNSSFQNAAVQVETLQNWYGKISGTSVDYASTIYGI--PFAMEL 307
++I +A++ + A + + N K SG+S DY I FA+EL
Sbjct: 306 VSKIGVDAIRQT--YGTAYRYGSSSNIIYKNSGSSKDYTYGHLNIKYSFALEL 356
>SB_49098| Best HMM Match : Peptidase_M14 (HMM E-Value=4.5e-12)
Length = 290
Score = 42.7 bits (96), Expect = 4e-04
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 188 CSQLYPGEQPFSEVETRAIRGILHRYSHKIIAYFNVH 224
CS +YPG +PFSEVETR + L++ ++ AY + H
Sbjct: 10 CSPIYPGSRPFSEVETRNVARYLYKKRKRLRAYVDFH 46
>SB_1170| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 36.3 bits (80), Expect = 0.038
Identities = 68/266 (25%), Positives = 105/266 (39%), Gaps = 36/266 (13%)
Query: 92 PEKKVLFIVHGLNILGINNLRCLINTKALAILLSYYFEH------LDKFDIFFIPLANPD 145
PE K + +HG ++G L LI L Y H +D I +P NPD
Sbjct: 115 PEFKYIANIHGNEVVGRELLLQLIR-----YLCENYESHEKVRTLVDTTRIHILPSINPD 169
Query: 146 GYTFLGNSQHIWNKNIAPQNDCPGVFLDRNFDVAWNVSSINSCSQLYPGEQPFSEVETRA 205
GY L + + +K I +N GV L+RNF Q +P + ETRA
Sbjct: 170 GYE-LASVKGKTHKFIGRRN-AYGVDLNRNFP-----------DQFFPSSNGPPQPETRA 216
Query: 206 IRGILHRYSHKIIAYFNVHVGSINHRVIKGDAVLYPNGYTDVQIDDDKYFDLKAEIEEAM 265
+ + Y + A ++H G++ D+ + Y+ DDD + + + +
Sbjct: 217 VMNWIRDYPFVLSA--SLHSGALVALYPYDDSPSGQSLYSATP-DDDVFRHVHRGVHGFV 273
Query: 266 KNSSFQNAAVQVETLQNWYGKISGTSVDYASTIYGIPFAMELVMQTYANGQPKEKPSTQT 325
KN +Q E L N + K+S D S G + + LV +Y QT
Sbjct: 274 KN-------IQGEPLANAFIKVSDRRHDVTSAKDGDYWRL-LVPGSYEVTASATGYEPQT 325
Query: 326 LALSEIWKRVIDTTFNFISRRTNNTE 351
L E+ ++ NF R +N E
Sbjct: 326 -KLVELRGEEVEKEVNFTLRHSNELE 350
>SB_28263| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 1258
Score = 34.7 bits (76), Expect = 0.11
Identities = 66/262 (25%), Positives = 102/262 (38%), Gaps = 37/262 (14%)
Query: 40 EIMSAFPNANVTYEVIGRTASYNDILLLKVTELKRDITRYFRANKNKYVDEIPEKKVLFI 99
E+ FPN Y IG++ D+ ++ ++ + NK+ PE K +
Sbjct: 645 ELHGQFPNITRLYS-IGKSVEGRDLWVIALS-----------STPNKHEPGKPEFKYIAN 692
Query: 100 VHGLNILGINNLRCLINTKALAILLSYYFE---HLDKFDIFFIPLANPDGY--TFLGNSQ 154
+HG ++G L L K L E LD + +P NPDGY F G+++
Sbjct: 693 MHGNEVVGKEVL--LTFAKYLCDNYKKDDEVTKALDTTRVHLLPSMNPDGYELAFKGDNR 750
Query: 155 HIWNKNIAPQNDCPGVFLDRNFDVAWNVSSINSCSQLYPGEQPFSEVETRAIRGILHRYS 214
W I +++ V L+RNF + SS QP ET+A+ +
Sbjct: 751 KNW---IIGRSNSKNVDLNRNFPDQFFKSSTGE-------PQP----ETKAVMKWIKEVP 796
Query: 215 HKIIAYFNVHVGSINHRVIKGDAVLYPNGYTDVQIDDDKYFDLKAEIEEAMKNSSFQNAA 274
+ A N+H GS+ D+ + Y+ DDD + L E N
Sbjct: 797 FVLSA--NLHGGSLVANYPFDDSPSGKSEYSK-SPDDDVFQSLAKAYSENHPTMHLDNPP 853
Query: 275 VQVETLQNWY-GKISGTSVDYA 295
+ Q Y GK GT + YA
Sbjct: 854 WECPEGQGGYEGKTLGTRMGYA 875
>SB_35588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1474
Score = 32.3 bits (70), Expect = 0.61
Identities = 21/93 (22%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Query: 1 MTPVQLLQHASFEDSTDTNLTKGITSQKLSPYTIKQQILEIMSAFPNANVTYEVIGRTAS 60
M LL ++FE T T L+ G+ S +P T E ++ + + E++G+ +
Sbjct: 696 MAITSLLCGSTFERRT-TVLSMGVVSDWSTPATTPSDAWEKLAILVASGKSREMVGKALT 754
Query: 61 YNDILLLKVTELKRDITRYFRANKNKYVDEIPE 93
++D+ + E++ RY A ++ D + +
Sbjct: 755 HDDVKRMSAEEVRTYEKRYETALASRTTDALAD 787
>SB_37941| Best HMM Match : Peptidase_M14 (HMM E-Value=0)
Length = 1328
Score = 31.9 bits (69), Expect = 0.81
Identities = 47/192 (24%), Positives = 69/192 (35%), Gaps = 19/192 (9%)
Query: 83 NKNKYVDEIPEKKVLFIVHGLNILGINNLRCLINTKALAILLSYYFEHL-DKFDIFFIPL 141
N K+ + PE K +HG ++G L LI ++ L D I +P
Sbjct: 110 NPGKHEVKEPEMKYTANIHGNEVVGKEMLLHLIRYLCHNYGVNKRITDLVDSTRIHILPS 169
Query: 142 ANPDGYTFLGNSQHIWNKNIAPQNDCPGVFLDRNFDVAWNVSSINSCSQLYPGEQPFSEV 201
NPDGY K + GV L+RNF Q +P +
Sbjct: 170 LNPDGYEMAAQK----TKTHTGTKNANGVDLNRNFP-----------DQFFPSTTGPPQP 214
Query: 202 ETRAIRGILHRYSHKIIAYFNVHVGSINHRVIKGDAVLYPNGYTDVQIDDDKYFDLKAEI 261
ETRAI + S+ + ++H GS+ D + Y+ DDD + L
Sbjct: 215 ETRAIMDWIK--SNPFVLSASLHSGSLVANYPYDDNPSGQSLYSATP-DDDVFRQLARAY 271
Query: 262 EEAMKNSSFQNA 273
EA N+
Sbjct: 272 SEAHPTMHLANS 283
>SB_9115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 30.7 bits (66), Expect = 1.9
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 13/104 (12%)
Query: 45 FPNANVTYEVIGRTASYNDILLLKVTELKRDITRYFRANKNKYVDEIPEKKVLFIVHGLN 104
FPN Y IGR+ + ++++T+ N K++ PE K + +HG
Sbjct: 18 FPNITRVY-TIGRSYQGKSLRVIEITK-----------NPGKHIPGKPEFKYIANMHGNE 65
Query: 105 ILGINNLRCLINTKALAI-LLSYYFEHLDKFDIFFIPLANPDGY 147
++G L L A + + LD I +P NPDGY
Sbjct: 66 VVGRELLLLLAEHLCEAYGKMPGITQLLDTTRIHLLPSMNPDGY 109
>SB_34368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 29.9 bits (64), Expect = 3.3
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 131 LDKFDIFFIPLANPDGYTF 149
LDK D +P+ NPDGY +
Sbjct: 519 LDKMDFVILPVVNPDGYEY 537
>SB_32575| Best HMM Match : SNF7 (HMM E-Value=1.1)
Length = 579
Score = 29.1 bits (62), Expect = 5.7
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 8/101 (7%)
Query: 25 TSQKLSPYTIK---QQILEIMSAFPNANVTYEVIGRTASYNDILLLKVTELKRDITRYFR 81
T+ + PYT K ++++E +A + + G+T N++ K E+ ++ Y
Sbjct: 440 TNIRGEPYTTKAELKRLIERSAAMKSYDADCRKNGQTLP-NELSKRKRIEIC-ELRGYGE 497
Query: 82 ANKN--KYVDEIPEKKVLFIVHGLNILGINNLRCLINTKAL 120
N+ KY+ +P +K L H ++LG+NN I KAL
Sbjct: 498 TNEYIAKYL-RVPVEKGLITAHSQSLLGLNNSAQSIPVKAL 537
>SB_21191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 541
Score = 28.3 bits (60), Expect = 10.0
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 6/120 (5%)
Query: 201 VETRAIRGILHRYSHKI----IAYFNVHVGSINHRVIKGDAVLY--PNGYTDVQIDDDKY 254
V+T G RY+ + +A V ++HR + D +Y NG+ V +
Sbjct: 325 VQTAYANGSSTRYAQDVLKVPVALAKTGVKFVHHRAEQFDIGVYFEANGHGTVLFSKEAV 384
Query: 255 FDLKAEIEEAMKNSSFQNAAVQVETLQNWYGKISGTSVDYASTIYGIPFAMELVMQTYAN 314
+K +++ KNS AA ++ L + + G S+ + I A + ++ + N
Sbjct: 385 AKIKEVAQKSEKNSEQHRAATELIYLIDLVNQAVGDSISDMLVVESILNAQDWELEDWFN 444
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.135 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,777,621
Number of Sequences: 59808
Number of extensions: 480603
Number of successful extensions: 1135
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1121
Number of HSP's gapped (non-prelim): 15
length of query: 353
length of database: 16,821,457
effective HSP length: 83
effective length of query: 270
effective length of database: 11,857,393
effective search space: 3201496110
effective search space used: 3201496110
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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