SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001889-TA|BGIBMGA001889-PA|undefined
         (112 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0512 - 24460391-24462337                                         32   0.12 
09_03_0166 + 12956794-12956832,12956936-12956977,12957084-129571...    30   0.36 
03_03_0248 + 15819264-15819460,15820691-15820729,15820797-158209...    30   0.48 
11_06_0182 + 20997071-20997832,20998010-20998150                       29   0.63 
06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866     29   0.84 
01_05_0167 + 18849791-18849973,18850081-18850250,18850341-188504...    29   0.84 
07_01_1089 + 10004773-10004831,10004924-10005033,10005631-100057...    27   2.6  
03_05_1007 - 29637911-29638333,29640095-29640282,29640688-296407...    27   2.6  
02_05_1041 - 33713561-33714564,33714844-33714904,33715640-337159...    27   2.6  
01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010           27   2.6  
07_03_1214 + 24931142-24932314,24934177-24934434                       27   3.4  
03_02_0829 - 11599665-11600364,11600853-11601076,11601786-116020...    27   3.4  
02_05_0484 - 29401195-29401404,29401572-29401755,29401866-294039...    27   3.4  
06_03_1454 - 30261240-30261470,30261896-30262615,30262700-302628...    27   4.5  
04_04_1057 - 30451759-30452523,30452627-30452701,30453180-304532...    27   4.5  
04_03_0649 - 18402976-18403220,18403305-18404499                       27   4.5  
04_03_0434 + 15889712-15889797,15890086-15890287,15891184-158913...    27   4.5  
12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,752...    26   5.9  
08_02_0747 - 20728073-20728081,20728167-20728353,20728810-207289...    26   5.9  
07_01_1164 - 11016314-11017688,11019144-11019181                       26   5.9  
04_01_0314 - 4243928-4244361,4245178-4245415                           26   5.9  
03_05_0654 + 26479416-26479605,26480058-26480246,26480674-264809...    26   5.9  
09_06_0211 + 21601321-21601807,21601982-21602265,21603337-21603666     26   7.8  
06_01_0497 + 3555919-3557154,3557815-3558143,3558177-3558775,355...    26   7.8  
05_06_0234 - 26602660-26602728,26602814-26602988,26603077-266031...    26   7.8  
05_04_0084 - 17788077-17789240                                         26   7.8  
03_06_0146 - 31976538-31978643,31978653-31978751                       26   7.8  
03_05_0001 - 19386264-19386284,19386446-19386517,19386614-193873...    26   7.8  
02_05_0415 + 28787353-28787496,28787658-28788204,28788297-287883...    26   7.8  
02_03_0390 + 18448671-18448889,18449567-18449632,18449702-184497...    26   7.8  
01_06_0213 + 27580635-27581105,27581206-27581298,27581376-275815...    26   7.8  

>11_06_0512 - 24460391-24462337
          Length = 648

 Score = 31.9 bits (69), Expect = 0.12
 Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 7/76 (9%)

Query: 23  DGQDFSDAESDDDIEKVQSIRNFLSEPLSNVETSFSP---QIYQFSSPVNEHVTNIVNRQ 79
           D + F  AES  D+ ++ SIR+ + E L  +         +I     P+ E V +++N  
Sbjct: 38  DAKSFRGAESSSDLAQLDSIRDMMRE-LQAIFVKMGENERRIVHLFDPIEELVDDVLNSL 96

Query: 80  P---EISNPQPSISGM 92
               EIS  QP ++G+
Sbjct: 97  AAGGEISTLQPKLAGV 112


>09_03_0166 +
           12956794-12956832,12956936-12956977,12957084-12957149,
           12957237-12957350,12957435-12957515,12957613-12957690,
           12958702-12958784,12959645-12959726,12959801-12959901,
           12960016-12960055,12960162-12960221,12960302-12960348,
           12960437-12960575,12960716-12960931,12961010-12961344,
           12961525-12961596,12962449-12962589,12962680-12962716,
           12962837-12963256
          Length = 730

 Score = 30.3 bits (65), Expect = 0.36
 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 7   RDEDIEGFWDIPSGSEDGQDFSDAESDDDIEKVQSIRNFLSEPLSNVETSFSPQIYQFS 65
           R   I+  W+   GS D  D  +    DD   V S  N +SEP  N E+ F     Q S
Sbjct: 293 RSSKIKPLWE---GSCDEDDMCEFADKDDCPAVGSSYNPMSEPFDNWESKFDASPEQTS 348


>03_03_0248 +
           15819264-15819460,15820691-15820729,15820797-15820936,
           15821150-15821225,15822866-15823160,15823236-15823342,
           15823442-15823489,15823568-15823853,15823954-15823961,
           15824083-15824184,15824426-15824553,15824664-15824741,
           15825047-15825145,15825247-15825302
          Length = 552

 Score = 29.9 bits (64), Expect = 0.48
 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 20  GSEDGQDFSDAESDDDIEKVQSIRNFLS-----EPLSNVETSFSPQIYQFSSPVNEHVTN 74
           G+E+ +D    E D++ E  +  + F S     E + ++   F  + Y +   +++    
Sbjct: 175 GNEESEDLKSDEEDEEEEDEEDEKGFSSDDSSDERMESIAKEFGVKRYNWLVYMDKKAKE 234

Query: 75  IVNRQPEISNPQPSISGMTSR 95
              RQ EI    PSI  ++ R
Sbjct: 235 EEKRQKEIIKGDPSIKKLSRR 255


>11_06_0182 + 20997071-20997832,20998010-20998150
          Length = 300

 Score = 29.5 bits (63), Expect = 0.63
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)

Query: 7   RDEDIEGFWDIPSGSEDGQDFSDAESDDDIE 37
           R +D+   WD+P G ED     D+ES+ D E
Sbjct: 215 RSDDLPK-WDVPEGDEDDDHSFDSESEFDSE 244


>06_01_1174 - 10025086-10027217,10027271-10027333,10027704-10027866
          Length = 785

 Score = 29.1 bits (62), Expect = 0.84
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 1   MSLRRLRDEDIEGFWDIPSGSEDGQDFS-DAESDDDIEKVQSIRNF 45
           M  RRL  E  E   +I SG ED   F  D E D ++ K Q   +F
Sbjct: 584 MEARRLAIEREESSTEIDSGDEDAIQFELDCEDDHEMLKAQPAYHF 629


>01_05_0167 +
          18849791-18849973,18850081-18850250,18850341-18850413,
          18850729-18850839,18850947-18850992,18851085-18851148,
          18851810-18851912,18851999-18852094,18852186-18852215,
          18852434-18852533,18852761-18852845,18852965-18853088
          Length = 394

 Score = 29.1 bits (62), Expect = 0.84
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 12 EGFWDIPSGSEDGQDFSDAESDDDIEKVQSIRNFLSE 48
          E F+   SGSED +  S +  DDD E+ +     + E
Sbjct: 43 ESFYSARSGSEDDRQVSSSNDDDDSEEEEQEEREMDE 79


>07_01_1089 +
           10004773-10004831,10004924-10005033,10005631-10005749,
           10005833-10005930,10006834-10006921,10006993-10007127,
           10007211-10007313,10007506-10007618,10007821-10007868
          Length = 290

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)

Query: 9   EDIEGFWDIPSGSEDGQDFSDAESDDD 35
           EDIE F  +P   ED  D +D E+D+D
Sbjct: 219 EDIEDFGGLPDDDED--DDNDGETDED 243


>03_05_1007 -
           29637911-29638333,29640095-29640282,29640688-29640773,
           29641108-29641173,29641289-29641331,29641398-29642328
          Length = 578

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 8   DEDIEGFWDIPSGSEDGQDFSDAESDD 34
           + ++ G   IP G E+   FSD E DD
Sbjct: 550 EAELSGHTTIPIGDEEDVSFSDLEDDD 576


>02_05_1041 -
           33713561-33714564,33714844-33714904,33715640-33715951,
           33716780-33716917
          Length = 504

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%)

Query: 8   DEDIEGFWDIPSGSEDGQDFSDAESDDDIEKVQSIRNFLSEPLSNVET 55
           DED EG     S S++G DFS+    +D    Q +    S+ LS V+T
Sbjct: 250 DEDGEG-----SSSDEGSDFSEDGDQEDESVHQGLGLLESKNLSGVQT 292


>01_01_0902 - 7099260-7099778,7100291-7100704,7101579-7102010
          Length = 454

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 51  SNVETSFSPQIYQFSSPVNEHVTNIVNRQ 79
           S VE + S  +   + P+NEH  +IVNR+
Sbjct: 329 SVVELAASSDVLVVACPLNEHTRHIVNRE 357


>07_03_1214 + 24931142-24932314,24934177-24934434
          Length = 476

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 4/37 (10%)

Query: 8   DED-IEGFWDIPSGS---EDGQDFSDAESDDDIEKVQ 40
           DED +    D+PS S   EDG +  D E D+D E+V+
Sbjct: 285 DEDAVVEVHDVPSSSDEEEDGIEEEDEEEDEDEEEVE 321


>03_02_0829 -
           11599665-11600364,11600853-11601076,11601786-11602000,
           11602300-11602377,11602593-11603907
          Length = 843

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 2   SLRRLRDEDIEGFWDIPSGSEDGQDFSDAESDDDIEKVQS 41
           ++RR RDE      D      +G++   AES+DD +   S
Sbjct: 221 NVRRFRDEKTSDLKDAEKSPINGREDDFAESEDDFDNPSS 260


>02_05_0484 - 29401195-29401404,29401572-29401755,29401866-29403973,
            29404320-29404403,29404507-29404777,29404864-29405117,
            29405513-29405722,29406357-29406503
          Length = 1155

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 13/25 (52%), Positives = 15/25 (60%)

Query: 18   PSGSEDGQDFSDAESDDDIEKVQSI 42
            PSGSE G +  D E DD   + QSI
Sbjct: 1121 PSGSELGAEQDDEEDDDSERRNQSI 1145


>06_03_1454 -
           30261240-30261470,30261896-30262615,30262700-30262843,
           30262953-30263204,30263542-30263751
          Length = 518

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 16  DIPSGSEDGQDFSDAESDDDIEKVQSIRNFLSEPLSNVE 54
           D  S  ED +D  D + DDD ++   +   ++E +S  E
Sbjct: 469 DFDSSEEDDEDDDDDDDDDDDDEEDGLSVSINEDMSYEE 507


>04_04_1057 -
           30451759-30452523,30452627-30452701,30453180-30453254,
           30453503-30453591,30454058-30454157,30454244-30454388,
           30454609-30454658,30455033-30455114,30455200-30455282,
           30455360-30455429,30455523-30455632,30455719-30455872,
           30456639-30456796,30457338-30457517
          Length = 711

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query: 78  RQPEISNPQPSISGMTSRTTTSPLHNLR 105
           R PE S P PS SG    T  S LH ++
Sbjct: 30  RSPEASLPSPSSSGNGVATRISNLHGVK 57


>04_03_0649 - 18402976-18403220,18403305-18404499
          Length = 479

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 54  ETSFSPQIYQFSSPVNEHVTNIVNRQPEISNPQPSISGMTSRTTTSPLHNL 104
           +T  SP+    +    +     V R P + +P P+ + M+S +TTS    L
Sbjct: 405 QTKISPEFKNVTGGARQTQAP-VQRPPALQSPAPTTAPMSSSSTTSSFSRL 454


>04_03_0434 +
           15889712-15889797,15890086-15890287,15891184-15891323,
           15891420-15891559,15891762-15891913,15892773-15892902,
           15892990-15893141
          Length = 333

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 7   RDEDIEGFWDIPSGSEDGQDFSDAESDDDIE 37
           +D+  E  W+  + +ED   F   E D+DIE
Sbjct: 185 KDQVAESKWENEAAAEDLDGFDGDEEDEDIE 215


>12_01_0818 +
           7524549-7524747,7524855-7525863,7525964-7526108,
           7526206-7526295,7526404-7526553,7527333-7528094,
           7528177-7528496,7528581-7528707,7528792-7528959,
           7529054-7530466,7530563-7530823,7530983-7531144,
           7531976-7532121,7532601-7532667,7533483-7533587
          Length = 1707

 Score = 26.2 bits (55), Expect = 5.9
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 7/61 (11%)

Query: 55  TSFSPQIYQFSSPVNEHVTNIVN------RQPEISNPQPSISGMTSRTTTSPLHNLRNLD 108
           + F   I Q S P  +H  NI+        Q +  NP+ S+    S+  TS  H  R LD
Sbjct: 601 SKFCSDIAQNSDPT-QHALNILASDGQYVNQDDFVNPEKSVCMHDSKIETSREHADRKLD 659

Query: 109 D 109
           D
Sbjct: 660 D 660


>08_02_0747 -
           20728073-20728081,20728167-20728353,20728810-20728913,
           20729008-20729139,20729583-20729810,20730263-20730358,
           20730440-20730511,20730588-20730760,20730947-20731000,
           20731086-20731134,20731228-20731326,20731420-20731511,
           20731607-20731832,20731927-20732100,20732186-20732809,
           20732890-20733033,20733108-20733218,20733516-20733650,
           20733963-20733989
          Length = 911

 Score = 26.2 bits (55), Expect = 5.9
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 6/70 (8%)

Query: 19  SGSEDGQDFSDAESDDDIEKVQSIRNFLSEPLSNVETSFS----PQIYQFSSPVNEHVTN 74
           SG E   +  +  +DD  + VQ   NF S P  N +T       P   +  +PVN+  + 
Sbjct: 480 SGIEPDHEPVEENNDDVNQAVQKNNNFTSSPKGNSKTVLDDDKLPIPNEEFNPVNK--ST 537

Query: 75  IVNRQPEISN 84
           I+N   EI +
Sbjct: 538 ILNSSEEIKH 547


>07_01_1164 - 11016314-11017688,11019144-11019181
          Length = 470

 Score = 26.2 bits (55), Expect = 5.9
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 24  GQDFSDAE-SDDDIEKVQSIRNFLSEPLSNVETSFSPQIYQFSSPVNEHV 72
           G D  +A  SDD + + +   +   + + +VET  S   Y+F SP+ +H+
Sbjct: 132 GMDKDEASYSDDAVRRFEWFADKAGKFVRDVETGCSLAHYRFFSPLIKHL 181


>04_01_0314 - 4243928-4244361,4245178-4245415
          Length = 223

 Score = 26.2 bits (55), Expect = 5.9
 Identities = 11/19 (57%), Positives = 14/19 (73%)

Query: 81  EISNPQPSISGMTSRTTTS 99
           EI+NPQ S+S +   TTTS
Sbjct: 103 EINNPQKSVSKLRHNTTTS 121


>03_05_0654 +
           26479416-26479605,26480058-26480246,26480674-26480989,
           26481286-26481844
          Length = 417

 Score = 26.2 bits (55), Expect = 5.9
 Identities = 7/34 (20%), Positives = 22/34 (64%)

Query: 2   SLRRLRDEDIEGFWDIPSGSEDGQDFSDAESDDD 35
           ++ +++++ I   W++P G   G+  +++++ DD
Sbjct: 363 NMAQMQEDSISSSWEMPQGGPLGEILTNSKNPDD 396


>09_06_0211 + 21601321-21601807,21601982-21602265,21603337-21603666
          Length = 366

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 16  DIPSGSEDGQDFSDAESDDDIEKVQSIRNFLSE 48
           D+P GS  G   +DA+++DD +K  S   F+S+
Sbjct: 313 DVPVGSTFGG--ADADAEDDPDKDDSWMQFISD 343


>06_01_0497 +
           3555919-3557154,3557815-3558143,3558177-3558775,
           3558919-3560393
          Length = 1212

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 3/31 (9%)

Query: 8   DEDIEGFWD-IPSGS--EDGQDFSDAESDDD 35
           DED    WD +  G   +DG D +D ++DDD
Sbjct: 861 DEDDTADWDAVDDGDAVDDGDDAADWDTDDD 891


>05_06_0234 -
           26602660-26602728,26602814-26602988,26603077-26603120,
           26603204-26603381,26603468-26603652,26603737-26603801,
           26603985-26604066,26604342-26604434,26605096-26605191,
           26605312-26605355,26605467-26605530
          Length = 364

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 7   RDEDIEGFWDIPSGSEDGQDFSDAESDDD 35
           +DED EG  D     +D +D  D E +DD
Sbjct: 305 QDEDFEGIMD--DEDDDDEDDDDDEDEDD 331


>05_04_0084 - 17788077-17789240
          Length = 387

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 19  SGSEDGQDFSDAESDDDIEKVQ 40
           S S  G+D SD + DDD ++V+
Sbjct: 118 SSSSSGEDASDDDDDDDDDEVE 139


>03_06_0146 - 31976538-31978643,31978653-31978751
          Length = 734

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 6/104 (5%)

Query: 8   DEDIEGFWDIPSGSEDGQDFSDAESDDDIEKVQSIRNFLSEPLSNV--ETSFSPQIYQFS 65
           +ED  G  D+ + S++  + +D ESD + E    + +   E   +   E+ +  +I    
Sbjct: 191 EEDDTGSSDLETDSDEYTESTDEESDYEEEDTTDLESDSDEDTESTDEESDYEEEI-DDE 249

Query: 66  SPVNEHVTNIVNRQPEISNPQPSISGMTSRTTTSPLHNLRNLDD 109
              +E V   +N   E+       SG+     T   H+  +LDD
Sbjct: 250 EIDDESVEEDINLDDELMG---FASGLFGDDDTESSHDEEDLDD 290


>03_05_0001 - 19386264-19386284,19386446-19386517,19386614-19387357,
            19387454-19388884,19388953-19389118,19392035-19392114,
            19392393-19392462,19392550-19392761,19392837-19392890,
            19393471-19393623,19393715-19393930,19394029-19394248,
            19394332-19394399,19394510-19394643,19394755-19394854,
            19394943-19395421,19395506-19395699,19396270-19396355,
            19396364-19396444,19396842-19397023,19397305-19397346,
            19398247-19398558,19399374-19399434,19399435-19399617,
            19399744-19399863,19400380-19401051,19402597-19402668,
            19402742-19402865,19403563-19403651,19405023-19405097
          Length = 2170

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)

Query: 82   ISNPQPSISGMTSRTTTSP 100
            +SNPQPS+S M  R    P
Sbjct: 2037 VSNPQPSLSSMQPRAPPPP 2055


>02_05_0415 +
           28787353-28787496,28787658-28788204,28788297-28788392,
           28788532-28788645,28788929-28789962,28790053-28790124
          Length = 668

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 12/34 (35%), Positives = 20/34 (58%)

Query: 8   DEDIEGFWDIPSGSEDGQDFSDAESDDDIEKVQS 41
           DE+ +   D+PS  ++  +FSD E++ D   V S
Sbjct: 505 DEEDDFSGDLPSDFDNADNFSDDETESDATVVIS 538


>02_03_0390 + 18448671-18448889,18449567-18449632,18449702-18449761,
            18449864-18449959,18452287-18452447,18452669-18452790,
            18452872-18453239,18453653-18453739,18453835-18453969,
            18454349-18454471,18454771-18454854,18455023-18455187,
            18455310-18455486,18455660-18455773,18455912-18456016,
            18457056-18457174,18457244-18457385,18457461-18457555,
            18457757-18457862,18458125-18458204,18458285-18458461,
            18459828-18459912,18460024-18460104,18460208-18460351,
            18460468-18460563,18460654-18460854,18461462-18461895,
            18462417-18462478,18462622-18462872,18462956-18463030,
            18463110-18463300,18463696-18463867,18463956-18464020,
            18464646-18464778,18464861-18464962,18465047-18465130,
            18465656-18465730,18465818-18465877,18465967-18466223,
            18466560-18466608,18466781-18466941,18467013-18467079,
            18467174-18467299,18467422-18467592,18468566-18468769,
            18469059-18469165,18469608-18469737,18469774-18469959,
            18470704-18470742
          Length = 2202

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 71   HVTNIVNRQPEISNPQPSI 89
            H   IV R+P+ISNP P +
Sbjct: 1126 HCQYIVAREPQISNPVPRV 1144


>01_06_0213 +
           27580635-27581105,27581206-27581298,27581376-27581540,
           27581640-27581862,27582329-27582429,27582666-27582713,
           27583086-27583172,27583745-27583879,27583985-27584140,
           27585336-27585545,27585641-27586351,27586429-27586974,
           27587872-27588495,27588595-27588699,27590460-27590711,
           27590939-27591766
          Length = 1584

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 9   EDIEGFWDIPSGSEDGQDFSDAESDDDIE 37
           E I  F ++ S SE  ++ +DAE D+D E
Sbjct: 621 EKIRAFQNVISDSEAEKEANDAERDEDSE 649


  Database: rice
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.311    0.129    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,568,628
Number of Sequences: 37544
Number of extensions: 146544
Number of successful extensions: 518
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 496
Number of HSP's gapped (non-prelim): 33
length of query: 112
length of database: 14,793,348
effective HSP length: 73
effective length of query: 39
effective length of database: 12,052,636
effective search space: 470052804
effective search space used: 470052804
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 54 (25.8 bits)

- SilkBase 1999-2023 -