GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001887-TA|BGIBMGA001887-PA|IPR008672|Mitotic checkpoint
         (621 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    27   0.29 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    27   0.51 
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    25   1.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   4.7  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   6.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   8.3  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 27.5 bits (58), Expect = 0.29
 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 6/102 (5%)

Query: 505 HSKALESLRNEVTRWREEAEGARRDV-----TKLRTQRDLLTASLERIGPQTKVLHLTNN 559
           H K + + +  + + R E E A+RD+     T L  +  L          + K   L N+
Sbjct: 76  HKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRAKFEELNND 135

Query: 560 PAAEAQKQISKELEAAQEEIKKLKVALREGGAQADPEELQQM 601
              +  K + K LE A     ++   +  GG+   P ++QQ+
Sbjct: 136 QFLKTLKPVKKVLEDADMTKDQIDEIVLVGGSTRIP-KIQQL 176


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 26.6 bits (56), Expect = 0.51
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 538 DLLTASLERIGPQTKVLHLTNNPAAEAQKQISKELEA-AQEEIKKLKVALREGGAQADPE 596
           DLL AS E +    + L        +A+  I+ E     Q+E+K L   L   G +ADPE
Sbjct: 460 DLLVAS-ETLNEHLEHLRQVFEKLKQARMTINLEKSNFIQKEVKFLGHILTINGIKADPE 518

Query: 597 ELQQMR 602
           ++  +R
Sbjct: 519 KISAIR 524


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 570 KELEAAQEEIKKLKVALREGGAQADPE 596
           K + A +E+   LKV L  GGA A P+
Sbjct: 83  KRVSALKEKNPNLKVMLSVGGATASPD 109


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 267 KLKELE--YERDSYKDWQTQSKTAQKRLCNMAELEKEVTRLRANER 310
           +L ELE  +ER  Y D  T+ + AQ+     A ++   +  RA  R
Sbjct: 231 QLDELEKAFERTQYPDIYTREELAQRTKLTEARIQVWFSNRRARLR 276


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/26 (30%), Positives = 17/26 (65%)

Query: 116 QHTIRKEMQILFEEEKASLIEQHKRD 141
           + T+RK++     EEK  +I++ +R+
Sbjct: 111 KRTVRKDLSYACREEKNCIIDKRQRN 136


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 8.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 544 LERIGPQTKVLHLTNNPAAE 563
           L R+   TK LHL N+P ++
Sbjct: 498 LNRVRKPTKKLHLKNSPISK 517


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.310    0.125    0.333 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,067
Number of Sequences: 317
Number of extensions: 3796
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 7
length of query: 621
length of database: 114,650
effective HSP length: 61
effective length of query: 560
effective length of database: 95,313
effective search space: 53375280
effective search space used: 53375280
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 46 (22.6 bits)