GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001886-TA|BGIBMGA001886-PA|IPR007259|Spc97/Spc98
         (486 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    28   0.13 
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   4.8  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   8.4  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 28.3 bits (60), Expect = 0.13
 Identities = 10/27 (37%), Positives = 18/27 (66%)

Query: 20  IHDAVLKIFTSVNKVFIHQLCTWLLYG 46
           +H  ++++  S+N+VF  QL  W+L G
Sbjct: 84  LHKTLVRVAKSLNQVFAPQLLLWVLLG 110


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 14/87 (16%), Positives = 35/87 (40%), Gaps = 1/87 (1%)

Query: 338 LHSLWKTYKQSASFAMSQLHNKLMFLMDNLQHYMQADVLETNFSRLMDAVNKTNDFEKLK 397
           L+S W    +   + +   + +++     L H++   VL+  F  + + ++      + +
Sbjct: 149 LYSTWSKKSKQVEYFLIHWYPRMLISTKLLAHFLILTVLKARFEAINNIIDSIRQNSQTR 208

Query: 398 -KAHATFLADILSQSFLTVTLSSDSDC 423
            +A  T     L Q    +  +S+  C
Sbjct: 209 NQAVPTGTIKTLVQMHSNLVTTSEEVC 235


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 14/87 (16%), Positives = 35/87 (40%), Gaps = 1/87 (1%)

Query: 338 LHSLWKTYKQSASFAMSQLHNKLMFLMDNLQHYMQADVLETNFSRLMDAVNKTNDFEKLK 397
           L+S W    +   + +   + +++     L H++   VL+  F  + + ++      + +
Sbjct: 149 LYSTWSKKSKQVEYFLIHWYPRMLISTKLLAHFLILTVLKARFEAINNIIDSIRQNSQTR 208

Query: 398 -KAHATFLADILSQSFLTVTLSSDSDC 423
            +A  T     L Q    +  +S+  C
Sbjct: 209 NQAVPTGTIKTLVQMHSNLVTTSEEVC 235


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 7/22 (31%), Positives = 13/22 (59%)

Query: 151 RRFTIWEDKESEFHEKLQKLKD 172
           + F  W D ++  +E++  LKD
Sbjct: 684 KEFDPWADLDNNLYERVTSLKD 705


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.321    0.135    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,069
Number of Sequences: 317
Number of extensions: 4391
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 4
length of query: 486
length of database: 114,650
effective HSP length: 59
effective length of query: 427
effective length of database: 95,947
effective search space: 40969369
effective search space used: 40969369
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)