Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001886-TA|BGIBMGA001886-PA|IPR007259|Spc97/Spc98
(486 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0396 - 3121189-3121226,3121552-3121609,3121938-3122060,312... 111 2e-24
09_04_0310 + 16578679-16580936,16581027-16581294 68 1e-11
12_02_1042 + 25638585-25638711,25639585-25639745,25639873-256400... 49 1e-05
02_04_0038 - 19110520-19110574,19110684-19110811,19110912-191110... 48 1e-05
04_04_0827 - 28457858-28458028,28458513-28458669,28458984-284590... 44 4e-04
04_04_0412 + 25023758-25023826,25023927-25023991,25024082-250241... 31 1.6
02_04_0454 + 23064081-23064139,23064297-23064366,23064553-230658... 31 2.1
04_04_0457 + 25359486-25359571,25360690-25360782,25361561-253616... 31 2.7
12_01_0656 - 5554906-5555194,5555640-5556178 30 3.6
06_02_0064 + 11062798-11063568,11064212-11064261,11064354-110645... 29 6.3
10_07_0054 - 12421618-12422025,12422230-12422308,12423076-12423107 29 8.3
>05_01_0396 -
3121189-3121226,3121552-3121609,3121938-3122060,
3122170-3122323,3122590-3122678,3123185-3123410,
3123575-3123760,3123859-3123914,3124381-3124464,
3124547-3124627,3124773-3125045,3125143-3125263,
3126094-3126230,3126406-3126697,3127401-3127585
Length = 700
Score = 111 bits (266), Expect = 2e-24
Identities = 95/364 (26%), Positives = 162/364 (44%), Gaps = 52/364 (14%)
Query: 91 GYTLNPTLIPHFMPLSLAQEILFIGKTV-ILFDLDP-----------KKVK----KHSGF 134
G+ ++ ++P ++ + +A+ ILF GK + +L + P + VK S
Sbjct: 240 GFHVSLDMLPEYIHMRVAESILFAGKAIRVLRNPSPGATLQESMNQSQNVKGSYRMQSLI 299
Query: 135 ASSRPMLPLKKYGIESRRFTIWEDKESEFHEKLQKLKDPDNFEVHNLRSVIREIKECVTK 194
S + L + S + + + + L++LK F S + I+
Sbjct: 300 GGSGALKELPNFPNISAEELLPQAEADKIDAMLKELKHSSEFHKRLFESAVGSIRTMAAN 359
Query: 195 HLWTVAVEEAQLIHELKLMKDFYXXXXXXXXXXXXXXTAHMLDKPTIRTSSRDMNQAFQM 254
+LW + V A L LK +KD++ DK R S R +F +
Sbjct: 360 NLWQLVVVRADLNGHLKALKDYFLLAKGDFFQAALKTIGDE-DKYFARVSLR--MSSFGI 416
Query: 255 AARSVFLSNNTDIEKFSFELPYVKPNISGNSSIDEDYSTDGWSSIILKYDFKWPLHLLFT 314
A + + D++K S P IS + + DGW SI L+Y WPL L FT
Sbjct: 417 KAST----SQKDLQKSS------TPEISSQGKATSELALDGWDSIALEYSVDWPLQLFFT 466
Query: 315 PEVLARYNDMFRLLLRLKKTQHDLHSLWKT--YKQSASFA----------MSQLHNK--- 359
P+V+++Y +F+ L+RLK+TQ +L W ++ A F+ +QL +
Sbjct: 467 PDVVSKYRKVFQYLIRLKRTQMELEKSWAAVMHQDHADFSDYCKDRKNGDATQLRRQRSK 526
Query: 360 --------LMFLMDNLQHYMQADVLETNFSRLMDAVNKTNDFEKLKKAHATFLADILSQS 411
+ FL+ NLQ Y+Q DV+E+ ++ L V ++DF +L H +L+ ++SQS
Sbjct: 527 PFWRVREHMAFLIRNLQFYIQVDVIESQWNVLQAHVQDSHDFTELVTFHQEYLSALISQS 586
Query: 412 FLTV 415
FL +
Sbjct: 587 FLDI 590
>09_04_0310 + 16578679-16580936,16581027-16581294
Length = 841
Score = 68.1 bits (159), Expect = 1e-11
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 20/139 (14%)
Query: 295 GWSSIILKYDFKWPLHLLFTPEVLARYNDMFRLLLRLKKTQHDLHSLWKT---------- 344
GW L+YD + PL +FT V+ RY +F L +LK+ H L +WKT
Sbjct: 577 GWDVFSLEYDARVPLDTVFTASVMKRYLKIFNFLWKLKRVDHSLTGIWKTMKPNCIVSSP 636
Query: 345 -YKQSASF---------AMSQLHNKLMFLMDNLQHYMQADVLETNFSRLMDAVNKTNDFE 394
YK+ + L N++ + N Q+Y+ +VLE +++R + ++ D +
Sbjct: 637 FYKEGTNIRSQFVSVLRKCQVLFNEMNHFVTNFQYYIMFEVLEVSWARFSEEMDSAKDLD 696
Query: 395 KLKKAHATFLADILSQSFL 413
L AH +L I+ +S L
Sbjct: 697 DLLLAHDKYLTSIVEKSLL 715
Score = 36.3 bits (80), Expect = 0.055
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 2 GCQILSLIHQYILSGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFI 57
G + IH + G+ + D + ++ V + +W+L GEL+DV+ EFFI
Sbjct: 337 GGAMAGAIHGHAQHGDPTFQDFMGRLLRRVCSPLFEMVRSWVLEGELEDVFAEFFI 392
>12_02_1042 +
25638585-25638711,25639585-25639745,25639873-25640064,
25640221-25640315,25640645-25640807,25640905-25641015,
25641611-25642741,25642813-25642965,25643060-25643159,
25643333-25643427,25643508-25643681,25643751-25643807,
25643887-25643958,25644151-25644249,25644320-25644451,
25644549-25644722,25644830-25644957,25645065-25645119
Length = 1072
Score = 48.8 bits (111), Expect = 1e-05
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Query: 303 YDFKWPLHLLFTPEVLARYNDMFRLLLRLKKTQHDLHS----LWKTYKQSASFAMSQL-- 356
Y WPL L+ E L +YN + LL++K+ + L +WK + L
Sbjct: 833 YKVSWPLDLIVNTEALKKYNQVMAFLLKVKRAKFILDKTRKWMWKGGGSTTHNFKQHLIV 892
Query: 357 HNKLMFLMDNLQHYMQADVLETNFSRLMDAVNKTNDFEKLKKAHATFLADILSQSFL 413
KL+ +D Y+ V + ++ L D + +++ + H +L+ I Q F+
Sbjct: 893 EQKLLHFVDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFV 949
>02_04_0038 -
19110520-19110574,19110684-19110811,19110912-19111085,
19111189-19111320,19111391-19111489,19111680-19111751,
19111831-19111887,19111957-19112130,19112211-19112305,
19112478-19112577,19112672-19112824,19112896-19114026,
19114621-19114731,19114829-19114991,19115364-19115458,
19115613-19115804,19115929-19116069
Length = 1023
Score = 48.4 bits (110), Expect = 1e-05
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 6/117 (5%)
Query: 303 YDFKWPLHLLFTPEVLARYNDMFRLLLRLKKTQHDLHSLWKTYKQSASFAMSQ------L 356
Y WPL L+ E L +YN + LL++K+ + L K + M +
Sbjct: 784 YKVSWPLDLIVNTEALKKYNQVMAFLLKVKRAKFILDETRKWMWKGGGSTMHNFKQHLIV 843
Query: 357 HNKLMFLMDNLQHYMQADVLETNFSRLMDAVNKTNDFEKLKKAHATFLADILSQSFL 413
KL+ +D Y+ V + ++ L D + +++ + H +L+ I Q F+
Sbjct: 844 EQKLLHFVDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFV 900
>04_04_0827 - 28457858-28458028,28458513-28458669,28458984-28459083,
28459204-28459231,28459321-28459396,28461276-28461355,
28461642-28461805,28461897-28462056,28462154-28462277,
28462901-28463941,28464141-28464259,28464512-28464823,
28465222-28465425,28466068-28466751,28467301-28467474
Length = 1197
Score = 43.6 bits (98), Expect = 4e-04
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 294 DGWSSIILKYDFKWPLHLLFTPEVLARYNDMFRLLLRLKKTQHDLHSLWKTYKQSASFAM 353
D I+L Y WP++++ T E L Y ++FR L++++ L +W+ K+
Sbjct: 942 DVLDDILLGYKVDWPVNIVITEEALKTYAEIFRYLVQVRLAVFSLTEVWRFLKELTQLIS 1001
Query: 354 SQLHNK 359
HN+
Sbjct: 1002 RSSHNR 1007
>04_04_0412 +
25023758-25023826,25023927-25023991,25024082-25024145,
25024806-25024940,25025029-25025160,25025470-25025553,
25025638-25025736,25025992-25026083,25026280-25026352,
25026476-25026628,25026721-25026840,25026926-25026979,
25027188-25027271,25027431-25027505,25027585-25027728,
25028016-25028123,25028340-25028459,25028909-25029102,
25029193-25029319
Length = 663
Score = 31.5 bits (68), Expect = 1.6
Identities = 12/48 (25%), Positives = 26/48 (54%)
Query: 14 LSGNKSIHDAVLKIFTSVNKVFIHQLCTWLLYGELKDVYQEFFISKRK 61
++G+ ++ + K+ + ++ L W+ G + D Y EFFI++ K
Sbjct: 220 MAGDSAVRSLLEKMTECASAAYLRMLERWVYEGVIDDPYGEFFIAENK 267
>02_04_0454 +
23064081-23064139,23064297-23064366,23064553-23065815,
23065946-23066515
Length = 653
Score = 31.1 bits (67), Expect = 2.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 407 ILSQSFLTVTLSSDSDCSGDPADTLNNPVFCNIMELLKLCHSFC 450
+LS+ L L ++S C G+ D + P F +E C FC
Sbjct: 46 LLSKCLLLQALCAESGCGGNGGDVIELPGFPGGVEAFDACAKFC 89
>04_04_0457 +
25359486-25359571,25360690-25360782,25361561-25361622,
25361758-25361816,25363624-25363733,25364795-25364829,
25365469-25365546,25365952-25366005,25366277-25366362,
25366468-25366571,25366986-25367054,25367135-25367250,
25367387-25367421,25367512-25367654,25367808-25367930,
25368463-25368556
Length = 448
Score = 30.7 bits (66), Expect = 2.7
Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 13/129 (10%)
Query: 286 SIDEDYSTDGWSSIILKYDFKWPLHLLFTPEVLARYN----DMFRLLLRLK-KTQHDLHS 340
++DE SS+ + KWPL+L +L +Y+ D+F+ + K K + + +S
Sbjct: 218 NVDESIRAFAESSMAMALSKKWPLYLSTKNTILKKYDGRFKDIFQEVYEEKWKEKFEENS 277
Query: 341 LWKTYK---QSASFAMSQLHNKLMFLMDNLQHYMQADVLETNFSR--LMDAVNKTNDFEK 395
+W ++ ++A+ ++ N +Q+D L F LM +V ++D +
Sbjct: 278 IWYEHRLIDDMVAYAVKS-EGGYVWACKNYDGDVQSDFLAQGFGSLGLMSSVLLSSDGKT 336
Query: 396 L--KKAHAT 402
L + AH T
Sbjct: 337 LEAEAAHGT 345
>12_01_0656 - 5554906-5555194,5555640-5556178
Length = 275
Score = 30.3 bits (65), Expect = 3.6
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 110 EILFIGKTVILFDLDPKKVKKHSGFASSRPMLPLKKYGIESRRFTIWEDK 159
+I F+ KTV+L + P + S F S R + +K+Y + R+ +W +K
Sbjct: 140 DITFLTKTVVL-ETVPASIASLSAF-SPRMIADIKQYTLMPTRYILWSNK 187
>06_02_0064 +
11062798-11063568,11064212-11064261,11064354-11064510,
11064598-11064816,11065301-11065429,11066502-11068031,
11068654-11069013,11069086-11069205,11069727-11069897,
11070022-11070180,11070327-11070452,11070660-11070968
Length = 1366
Score = 29.5 bits (63), Expect = 6.3
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 77 VCDKTLVSTETLGCGYTLNPTLIPHFMPLSLAQEILFIGKTVILFDLDPKKVKKHSGFAS 136
+ K ++ + +G T +P + H S QEILF+G + +D KV + F+
Sbjct: 298 ITGKIEIAIQIVGDAETYHPRICWH----SHKQEILFVGVANCVLKIDTTKVGRGMDFSR 353
Query: 137 SRPM-LPLKK 145
P+ PL K
Sbjct: 354 EEPLKCPLDK 363
>10_07_0054 - 12421618-12422025,12422230-12422308,12423076-12423107
Length = 172
Score = 29.1 bits (62), Expect = 8.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 161 SEFHEKLQKLKDPDNFEVHNLRS 183
S+F K++K K PDN + H+ RS
Sbjct: 73 SKFQNKMKKHKKPDNIKAHHTRS 95
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.321 0.135 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,436,559
Number of Sequences: 37544
Number of extensions: 468421
Number of successful extensions: 1104
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1086
Number of HSP's gapped (non-prelim): 20
length of query: 486
length of database: 14,793,348
effective HSP length: 85
effective length of query: 401
effective length of database: 11,602,108
effective search space: 4652445308
effective search space used: 4652445308
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 62 (29.1 bits)
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