BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001886-TA|BGIBMGA001886-PA|IPR007259|Spc97/Spc98 (486 letters) Database: mosquito 2123 sequences; 516,269 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 25 3.4 >AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. Length = 1187 Score = 25.4 bits (53), Expect = 3.4 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Query: 132 SGFASSRPMLPLKK--YGIESRRFTIWEDKESEFHEKLQKLKD 172 SG P +P K +G+++ R+ ++ E KL+KL+D Sbjct: 930 SGMEQKYPWIPEDKEFFGVKNTRYDYNKEDPQEAGRKLKKLQD 972 Database: mosquito Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 516,269 Number of sequences in database: 2123 Lambda K H 0.321 0.135 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 467,628 Number of Sequences: 2123 Number of extensions: 17887 Number of successful extensions: 77 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 0 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 77 Number of HSP's gapped (non-prelim): 1 length of query: 486 length of database: 516,269 effective HSP length: 67 effective length of query: 419 effective length of database: 374,028 effective search space: 156717732 effective search space used: 156717732 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.9 bits) S2: 50 (24.2 bits)
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