GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001886-TA|BGIBMGA001886-PA|IPR007259|Spc97/Spc98
         (486 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   7.6  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   7.6  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   7.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   7.6  

>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 11/43 (25%), Positives = 24/43 (55%)

Query: 414 TVTLSSDSDCSGDPADTLNNPVFCNIMELLKLCHSFCSMSEIA 456
           T+T ++++ C       + NP FC++  LL L  +   ++++A
Sbjct: 35  TMTHTTNAFCLPFCGPNVINPFFCDMSPLLSLVCADTRLNKLA 77


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 4/80 (5%)

Query: 303 YDFKWPLHLLFTPEVLARYNDMFRLLLRLKKTQHDLHSLWKTYKQSASFAMSQLHNKLMF 362
           +DF W    +  P+ +  +     L+L  K T H +  +++ YK      +    +  + 
Sbjct: 26  FDF-WKSRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDIYEKYKNEPMVGLYATRSPFLL 84

Query: 363 LMDNLQHYMQADVLETNFSR 382
           L D     +  D+L  +FS+
Sbjct: 85  LND---PELIKDILIRDFSK 101


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 6/19 (31%), Positives = 13/19 (68%)

Query: 283 GNSSIDEDYSTDGWSSIIL 301
           G+  +D+D    GWS++++
Sbjct: 122 GDHDVDKDELITGWSAVVI 140


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 9/31 (29%), Positives = 18/31 (58%)

Query: 165 EKLQKLKDPDNFEVHNLRSVIREIKECVTKH 195
           EK +   + +N ++  LR ++ +IK   T+H
Sbjct: 198 EKYKMFCNLENVKLKELRIILEDIKHINTRH 228



 Score = 22.2 bits (45), Expect = 10.0
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)

Query: 246 RDMNQAFQMAARSV-FLSNNTDIEKFSFELPYVKPNISGNSSIDEDYST 293
           R+  Q  +   R V F  NN DIEKF   L Y+K      +SI  + +T
Sbjct: 293 RNRLQLLESFKRKVNFYPNNQDIEKF---LNYLKRGGKTLTSISVESNT 338


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.135    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,808
Number of Sequences: 429
Number of extensions: 4857
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 5
length of query: 486
length of database: 140,377
effective HSP length: 60
effective length of query: 426
effective length of database: 114,637
effective search space: 48835362
effective search space used: 48835362
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)