Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001885-TA|BGIBMGA001885-PA|IPR001781|LIM, zinc-binding
(492 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 99 9e-21
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 1e-16
SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39) 82 1e-15
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 78 1e-14
SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 2e-10
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 62 7e-10
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 59 7e-09
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 58 2e-08
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 57 3e-08
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 56 5e-08
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 53 6e-07
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 8e-07
SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26) 50 3e-06
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 47 4e-05
SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 7e-05
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 44 3e-04
SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22) 44 4e-04
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14) 38 0.018
SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16) 38 0.024
SB_30029| Best HMM Match : Extensin_2 (HMM E-Value=0.45) 37 0.042
SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.074
SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026) 35 0.13
SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08) 35 0.17
SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.23
SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0) 34 0.30
SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.52
SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.69
SB_3686| Best HMM Match : Myotub-related (HMM E-Value=2.8e-08) 32 1.2
SB_23899| Best HMM Match : TNFR_c6 (HMM E-Value=7.1e-09) 31 1.6
SB_38060| Best HMM Match : ITAM (HMM E-Value=1.3) 31 2.1
SB_37808| Best HMM Match : Avirulence (HMM E-Value=2.8) 31 2.1
SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14) 31 2.1
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 2.1
SB_25073| Best HMM Match : Extensin_2 (HMM E-Value=0.27) 31 2.1
SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05) 31 2.8
SB_52967| Best HMM Match : zf-CCCH (HMM E-Value=4.7) 30 3.7
SB_25818| Best HMM Match : Pkinase (HMM E-Value=1.7e-20) 30 3.7
SB_42688| Best HMM Match : PB1 (HMM E-Value=0.12) 30 4.9
SB_37776| Best HMM Match : fn3 (HMM E-Value=1.4e-22) 30 4.9
SB_26487| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 4.9
SB_12127| Best HMM Match : Endonuclease_NS (HMM E-Value=2.9e-35) 30 4.9
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 29 6.4
SB_43092| Best HMM Match : 7tm_1 (HMM E-Value=0.23) 29 6.4
SB_6095| Best HMM Match : 7tm_1 (HMM E-Value=0.013) 29 6.4
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 29 8.5
SB_58407| Best HMM Match : TNFR_c6 (HMM E-Value=3.5e-05) 29 8.5
SB_47578| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5
SB_39447| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 98.7 bits (235), Expect = 9e-21
Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 256 KKEALSKRSPLPKEQEVDALTNLL--VQSITDSQDLDVF--GICVKCGERISGENAGCTA 311
+K+ S P +V L N+L +QS Q + G+C C + I G+ CTA
Sbjct: 239 QKQKTPSGSAAPSVGKVSQLDNMLGSLQSDMTRQGVSTTKKGMCAACNKPIIGQV--CTA 296
Query: 312 MGNTYHVHCFTCQRCNVNLQGKPFYDVENEPYCEADYYDTL-EKCCVCRKIILDRILRAT 370
+G T+H F C C L + F++ + +PYCE DY+DT +C C ILD + A
Sbjct: 297 LGKTWHPEHFACVACEAPLGTQNFFERDGKPYCERDYHDTFAPRCAYCNGPILDSCVTAL 356
Query: 371 GKPYHPTCFSCVECGKSLDGIPFTVDAMNQIHCIDDFHKKFAPRC 415
+ +HP F C ECG F + + C +D++ FAPRC
Sbjct: 357 DQTWHPEHFVCAECGNPFGDTGFH-ERDGKPFCREDYYAMFAPRC 400
Score = 66.9 bits (156), Expect = 3e-11
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 355 CCVCRKIILDRILRATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQIHCIDDFHKKFAPR 414
C C K I+ ++ A GK +HP F+CV C L G + + +C D+H FAPR
Sbjct: 282 CAACNKPIIGQVCTALGKTWHPEHFACVACEAPL-GTQNFFERDGKPYCERDYHDTFAPR 340
Query: 415 CCVCELPIMPEEGQEETVRVVALDRSFHVKCYRCEDCG 452
C C PI+ V ALD+++H + + C +CG
Sbjct: 341 CAYCNGPILDS-------CVTALDQTWHPEHFVCAECG 371
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 85.0 bits (201), Expect = 1e-16
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 295 CVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQGKPFYDVENEPYCEADYYDTLEK 354
C CG+ I + GN +H +CF C C + F ++ +C Y K
Sbjct: 402 CFACGQMIDSGASRLEYSGNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSK 461
Query: 355 -CCVCRKIILDRILRATGKPYHPTCFSCVECGKSLDGIPFTV-DAMNQIHCIDDFHKKFA 412
C C + +L+ + G+ +H CFSC C +SL F+V D +C++ + K +A
Sbjct: 462 RCASCGEPLLEGGVLYNGETWHKACFSCYFCHRSLASAAFSVRDGCR--YCMECYGKFYA 519
Query: 413 PRCCVCELPIMPEEGQEETVRVVALDRSFHVKCYRCEDCGLLLSSEAEGRGCYPLDDHIL 472
+C +C I+ G+ T+ + +FH +C+ C CG L+SE G D +L
Sbjct: 520 KQCEICLKAIV--GGEYYTLE----ESNFHKECFMCSRCGRSLASE----GFVREGDELL 569
Query: 473 CKTC 476
C C
Sbjct: 570 CGDC 573
Score = 58.4 bits (135), Expect = 1e-08
Identities = 47/188 (25%), Positives = 75/188 (39%), Gaps = 15/188 (7%)
Query: 293 GICVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQGKPFYDVENEPYCEADYYDT- 351
G C+K +GE AM +H+ F CQ C+ ++ G+ F ++P C + D+
Sbjct: 278 GPCLKALLIFTGEYT--VAMNKNWHLGHFQCQTCDHSITGRQFIVRGDKPVCTDCFKDSY 335
Query: 352 LEKCCVCRKIILDR---ILRATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQIHCIDDFH 408
+C C + I I + +H CF C C + L +QI C + +
Sbjct: 336 AHECEACHQKIGPESRDISSDDDRHWHDKCFICDICRRPLKSDGKFTFYRDQILCNNCYV 395
Query: 409 KKFAPRCCVCELPIMPEEGQEETVRVVALDRSFHVKCYRCEDCGLLLSSEAEGRGCYPLD 468
+ C C M + G R+ +H C+RC +CG + + G P D
Sbjct: 396 ANYQKECFACGQ--MIDSGAS---RLEYSGNFWHENCFRCANCGEAIGTS----GFVPKD 446
Query: 469 DHILCKTC 476
D C C
Sbjct: 447 DTFFCPGC 454
>SB_26948| Best HMM Match : LIM (HMM E-Value=2.3e-39)
Length = 351
Score = 81.8 bits (193), Expect = 1e-15
Identities = 54/184 (29%), Positives = 78/184 (42%), Gaps = 16/184 (8%)
Query: 294 ICVKC-GERISGENAGCTAMGNTYHVHCFTCQRCNVNLQGKPFYDVENEPYCEADYYDTL 352
+C C G+ GE T+H CF C C + K F + C +
Sbjct: 175 VCAACNGDFAPGEKK-VGYQSKTFHDKCFICDECKQPIGSKQFIRRDERRLCNNCFDSKF 233
Query: 353 EKCCV-CRKIILDRILRATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQIHCIDDFHKKF 411
K CV C ++I ++ G YH CF+C C K L G PFT + C + + +++
Sbjct: 234 AKVCVKCNQVIKTSSVQHAGSTYHSECFTCHHCDKPLAGSPFTKQEGRNV-CQNCYRERY 292
Query: 412 APRCCVCELPIMPEEGQEETVRVVALD-RSFHVKCYRCEDCGLLLSSE----AEG-RGCY 465
A RC C I E + VA D + FH +C+ C C L+ E +G + C
Sbjct: 293 AKRCGACHNLI------EGNTKFVAYDEKYFHRECFTCCKCNKPLAGEKFRIRDGEKICL 346
Query: 466 PLDD 469
P DD
Sbjct: 347 PCDD 350
Score = 69.3 bits (162), Expect = 7e-12
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 7/118 (5%)
Query: 294 ICVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQGKPFYDVENEPYCEADYYDTLE 353
+CVKC + I + + G+TYH CFTC C+ L G PF E C+ Y +
Sbjct: 236 VCVKCNQVI--KTSSVQHAGSTYHSECFTCHHCDKPLAGSPFTKQEGRNVCQNCYRERYA 293
Query: 354 K-CCVCRKII--LDRILRATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQI--HCIDD 406
K C C +I + + K +H CF+C +C K L G F + +I C DD
Sbjct: 294 KRCGACHNLIEGNTKFVAYDEKYFHRECFTCCKCNKPLAGEKFRIRDGEKICLPCDDD 351
Score = 33.5 bits (73), Expect = 0.40
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 374 YHPTCFSCVECGKSLDGIPFTVDAMNQIHCIDDFHKKFAPRCCVCE 419
+H CF+C E G+ L + + ++I+C + +K PRC CE
Sbjct: 105 WHVKCFTCEEDGELLVDLIYC-SKDDEIYCCRHWGEKLKPRCAGCE 149
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 78.2 bits (184), Expect = 1e-14
Identities = 48/166 (28%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 313 GNTYHVHCFTCQRCNVNLQGKPFYDVENEPYCEADYYDTLEK-CCVCRKIILDRILRATG 371
GN +H +CF C C + F ++ +C Y K C C + +L+ + G
Sbjct: 8 GNFWHENCFRCANCGEAIGTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLLEGGVLYNG 67
Query: 372 KPYHPTCFSCVECGKSLDGIPFTV-DAMNQIHCIDDFHKKFAPRCCVCELPIMPEEGQEE 430
+ +H CFSC C +SL F+V D +C++ + K +A +C +C I+ G+
Sbjct: 68 ETWHKACFSCYFCHRSLASAAFSVRDGCR--YCMECYGKFYAKQCEICLKAIV--GGEYY 123
Query: 431 TVRVVALDRSFHVKCYRCEDCGLLLSSEAEGRGCYPLDDHILCKTC 476
T+ + +FH +C+ C CG L+SE G D +LC C
Sbjct: 124 TLE----ESNFHKECFMCSRCGRSLASE----GFVREGDELLCGDC 161
Score = 43.6 bits (98), Expect = 4e-04
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 367 LRATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQIHCIDDFHKKFAPRCCVCELPIMPEE 426
L +G +H CF C CG+++ G V + C + KF+ RC C P++ E
Sbjct: 4 LEYSGNFWHENCFRCANCGEAI-GTSGFVPKDDTFFCPGCYQSKFSKRCASCGEPLL--E 60
Query: 427 GQEETVRVVALDRSFHVKCYRCEDCGLLLSSEA 459
G V+ ++H C+ C C L+S A
Sbjct: 61 G-----GVLYNGETWHKACFSCYFCHRSLASAA 88
>SB_30367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 64.5 bits (150), Expect = 2e-10
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Query: 295 CVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQGKPFYDVENEPYCEADYYDTLEK 354
CV C + I G T TYH CF C RC L GK F + E C+ Y+D K
Sbjct: 61 CVACRQYIEGTVKFVTRDEGTYHSDCFVCSRCRKPLAGKTFTEHEGSWVCDDCYHDRYAK 120
Query: 355 -CCVCRKIILDRI--LRATGKPYHPTCFSC--VECGKSLDGIPFTVDAMNQIHCID 405
C +C + + + ++ K YH CF C C K L G F + + + C++
Sbjct: 121 RCNMCHQSLEANVEFVKYDEKLYHNECFVCQNPRCRKPLSGAKFALKSDGRRMCLN 176
Score = 54.0 bits (124), Expect = 3e-07
Identities = 42/139 (30%), Positives = 56/139 (40%), Gaps = 13/139 (9%)
Query: 355 CCVCRKIILDRILRATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQIHCIDDFHKKFAPR 414
C C K I ++R KP+H CF C C L G F + ++ C D +A R
Sbjct: 2 CNSCFKTITSSVVRYQNKPHHSECFVCFHCRTPLAGKTFQMRDDRKV-CKDCNRIHYAKR 60
Query: 415 CCVCELPIMPEEGQEETVRVVALDR-SFHVKCYRCEDCGLLLSSE--AEGRGCYPLDD-- 469
C C I E TV+ V D ++H C+ C C L+ + E G + DD
Sbjct: 61 CVACRQYI------EGTVKFVTRDEGTYHSDCFVCSRCRKPLAGKTFTEHEGSWVCDDCY 114
Query: 470 -HILCKTCNARRVRLLTNV 487
K CN L NV
Sbjct: 115 HDRYAKRCNMCHQSLEANV 133
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 62.5 bits (145), Expect = 7e-10
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 14/169 (8%)
Query: 295 CVKCGERISGEN----AGCTAMGNTYHVHCFTCQRCNVNLQGKPFYDVENEPYCEADYYD 350
C +CGE ++ + A +H CF C C L ++ +++ YC + +
Sbjct: 78 CKECGECVTAGSMAVYASRAGQHTCWHASCFICTTCKELLVDLIYFYKDSKVYCGRHHAE 137
Query: 351 TLE-KCCVCRKIIL-DRILRATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQIHCIDDFH 408
TL+ +C C +II ++ A +H F C EC L G+ + V N+ +C F
Sbjct: 138 TLKPRCAACDEIIFAEQCTEAEDSCWHVQHFCCFECDCPLGGMRY-VMRDNKPYCCHCFE 196
Query: 409 KKFAPRCCVCELPIMPEEGQEETVRVVALDRSFHV--KCYRCEDCGLLL 455
+A C C PI P+ Q + + +H +C+ C CG L
Sbjct: 197 SLYAEFCDSCGEPIEPDASQ-----MAHNGQHWHATNECFSCCTCGKAL 240
Score = 59.3 bits (137), Expect = 7e-09
Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
Query: 295 CVKCGERISGENAGCT-AMGNTYHVHCFTCQRCNVNLQGKPFYDVENEPYCEADYYDTL- 352
C C E I E CT A + +HV F C C+ L G + +N+PYC +++L
Sbjct: 143 CAACDEIIFAEQ--CTEAEDSCWHVQHFCCFECDCPLGGMRYVMRDNKPYC-CHCFESLY 199
Query: 353 -EKCCVCRKIILDRI--LRATGKPYHPT--CFSCVECGKSLDGIPFTVDAMNQIHCIDDF 407
E C C + I + G+ +H T CFSC CGK+L G+PF + +I+C D
Sbjct: 200 AEFCDSCGEPIEPDASQMAHNGQHWHATNECFSCCTCGKALLGLPF-LPKSGEIYCSPDC 258
Query: 408 HKKFAP 413
P
Sbjct: 259 SNGIPP 264
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 59.3 bits (137), Expect = 7e-09
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 9/150 (6%)
Query: 266 LPKEQEVDALTNLLVQSITDSQDLDVFGICVKCGERISGENAGCTAMGNTYHVHCFTCQR 325
+P + +D + + S D +C CG RI E A+ +H C C
Sbjct: 220 IPVRKSIDEFISWAMPSADQMGDKQQ-AVCAGCGSRIL-ERFYLMAVDQEWHADCLKCSD 277
Query: 326 CNVNLQGK-PFYDVENEPYCEADYYD--TLEKCCVCRKIILDR--ILRATGKPYHPTCFS 380
C + L + + + C DYY +++KC C + I + ++RA + YH CF+
Sbjct: 278 CELRLDNELTCFSKDGVILCREDYYRRFSVKKCSSCSQAISSKELVMRARDQVYHVNCFA 337
Query: 381 CVECGKSL-DGIPFTVDAMNQIHCIDDFHK 409
C C + L G F + + +I+C +D+ +
Sbjct: 338 CDRCKRMLATGEYFGMRGI-RIYCKEDYEE 366
Score = 51.2 bits (117), Expect = 2e-06
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 355 CCVCRKIILDRI-LRATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQIHCIDDFHKKFA- 412
C C IL+R L A + +H C C +C LD I C +D++++F+
Sbjct: 248 CAGCGSRILERFYLMAVDQEWHADCLKCSDCELRLDNELTCFSKDGVILCREDYYRRFSV 307
Query: 413 PRCCVCELPIMPEEGQEETVRVVALDRSFHVKCYRCEDCGLLLSS 457
+C C I +E + + A D+ +HV C+ C+ C +L++
Sbjct: 308 KKCSSCSQAISSKE-----LVMRARDQVYHVNCFACDRCKRMLAT 347
Score = 43.6 bits (98), Expect = 4e-04
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 295 CVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQGKPFYDVEN-EPYCEADYYDTLE 353
C C + IS + A YHV+CF C RC L ++ + YC+ DY + L
Sbjct: 310 CSSCSQAISSKELVMRARDQVYHVNCFACDRCKRMLATGEYFGMRGIRIYCKEDYEELLR 369
Query: 354 K 354
+
Sbjct: 370 E 370
Score = 37.1 bits (82), Expect = 0.032
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 430 ETVRVVALDRSFHVKCYRCEDCGLLLSSEAEGRGCYPLDDHILCKTCNARR 480
E ++A+D+ +H C +C DC L L +E C+ D ILC+ RR
Sbjct: 257 ERFYLMAVDQEWHADCLKCSDCELRLDNELT---CFSKDGVILCREDYYRR 304
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 58.0 bits (134), Expect = 2e-08
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Query: 294 ICVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQGKPFYDVENEPYCEADYYDTL- 352
IC C E I + + +H C C C L + + + + YC DY
Sbjct: 45 ICTGCNEPIE-DRFLMKVVDEAWHESCLQCCICRSQLS-RSCFSKDRKLYCRTDYEKVFG 102
Query: 353 EKCCVCRKIIL--DRILRATGKPYHPTCFSCVECGKSLD-GIPFTVDAMNQIHCIDDFHK 409
KC C+K I + ++RA G YH CF C CG L+ G F + N+++C DF K
Sbjct: 103 TKCSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKD-NKLYCKADFAK 161
Score = 52.8 bits (121), Expect = 6e-07
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Query: 355 CCVCRKIILDRIL-RATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQIHCIDDFHKKFAP 413
C C + I DR L + + +H +C C C L F+ D +++C D+ K F
Sbjct: 46 CTGCNEPIEDRFLMKVVDEAWHESCLQCCICRSQLSRSCFSKD--RKLYCRTDYEKVFGT 103
Query: 414 RCCVCELPIMPEEGQEETVRVVALDRSFHVKCYRCEDCGLLLSSEAEGRGCYPLDDHILC 473
+C C+ I E + + AL +H+ C+ C CG +L +G+ D+ + C
Sbjct: 104 KCSGCKKTIPANE-----LVMRALGNVYHLHCFVCTMCGHILE---KGQEFALKDNKLYC 155
Query: 474 KTCNARRVRL 483
K A+ +L
Sbjct: 156 KADFAKLPKL 165
Score = 50.4 bits (115), Expect = 3e-06
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 291 VFGI-CVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQ-GKPFYDVENEPYCEADY 348
VFG C C + I A+GN YH+HCF C C L+ G+ F +N+ YC+AD+
Sbjct: 100 VFGTKCSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCKADF 159
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 57.2 bits (132), Expect = 3e-08
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 9/123 (7%)
Query: 353 EKCCVCRKIILDRIL-RATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQIHCIDDFHKKF 411
E+C C I+DR L + +G+ +H C C C L +I+C D+ ++F
Sbjct: 100 ERCVGCEAKIVDRYLVKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCKADYARQF 159
Query: 412 APRCCVCELPIMPEEGQEETVRVVALDRSFHVKCYRCEDCGLLLSSEAEGRGCYPLDDHI 471
+C C I + V +H+ C+ C++C LS+ G D H+
Sbjct: 160 GTKCARCGRSIHANDWVRRAKNCV-----YHLACFACDNCKRQLST---GEEFALKDGHV 211
Query: 472 LCK 474
LCK
Sbjct: 212 LCK 214
Score = 46.8 bits (106), Expect = 4e-05
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 295 CVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNL-QGKPFYDVENEPYCEADYYDTL- 352
CV C +I G +H C C C+ L + Y + + YC+ADY
Sbjct: 102 CVGCEAKIVDRYL-VKVSGRAWHTKCLKCCLCSDELGREATCYTKDGKIYCKADYARQFG 160
Query: 353 EKCCVCRKIIL--DRILRATGKPYHPTCFSCVECGKSL 388
KC C + I D + RA YH CF+C C + L
Sbjct: 161 TKCARCGRSIHANDWVRRAKNCVYHLACFACDNCKRQL 198
Score = 36.7 bits (81), Expect = 0.042
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 295 CVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQ-GKPFYDVENEPYCEADYYDTLE 353
C +CG I + A YH+ CF C C L G+ F + C+ Y + L+
Sbjct: 163 CARCGRSIHANDWVRRAKNCVYHLACFACDNCKRQLSTGEEFALKDGHVLCKLHYLEALD 222
Score = 32.7 bits (71), Expect = 0.69
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 9/67 (13%)
Query: 414 RCCVCELPIMPEEGQEETVRVVALDRSFHVKCYRCEDCGLLLSSEAEGRGCYPLDDHILC 473
RC CE I+ + V R++H KC +C C L EA CY D I C
Sbjct: 101 RCVGCEAKIV------DRYLVKVSGRAWHTKCLKCCLCSDELGREAT---CYTKDGKIYC 151
Query: 474 KTCNARR 480
K AR+
Sbjct: 152 KADYARQ 158
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 56.4 bits (130), Expect = 5e-08
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 295 CVKCGERI-SGENAGCTAMGNT---YHVHCFTCQRCNVNLQGKPFYDVENEPYCEADYYD 350
C +C + + +GE A + +H CF C CN L ++ + YC Y +
Sbjct: 309 CFRCSKPVMTGEVAVFASRAGEDKCWHPGCFVCTVCNNLLVDLIYFYKDGVIYCGRHYAE 368
Query: 351 TLE-KCCVCRKIIL-DRILRATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQIHCIDDFH 408
+ +C C ++I + +A + +H F C+EC + L G V Q HC++ +
Sbjct: 369 QFKPRCAACDELIFSETYTQAEDRNWHQRHFCCLECDRDLGG-QLYVARGGQPHCLECYD 427
Query: 409 KKFAPRCCVCE 419
K +A C C+
Sbjct: 428 KYYAKHCMSCK 438
Score = 43.6 bits (98), Expect = 4e-04
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 372 KPYHPTCFSCVECGKSL-DGIPFTVDAMNQIHCIDDFHKKFAPRCCVCELPIMPEEGQEE 430
K +HP CF C C L D I F D + I+C + ++F PRC C+ I E +
Sbjct: 332 KCWHPGCFVCTVCNNLLVDLIYFYKDGV--IYCGRHYAEQFKPRCAACDELIFSETYTQ- 388
Query: 431 TVRVVALDRSFHVKCYRCEDC 451
A DR++H + + C +C
Sbjct: 389 -----AEDRNWHQRHFCCLEC 404
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 52.8 bits (121), Expect = 6e-07
Identities = 37/120 (30%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 294 ICVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQ--GKPFYDVENEPYCEADY--- 348
+C C E IS + A+G+ +H C C+ C+ L G Y N C+ DY
Sbjct: 16 LCRSCNEPISDKYV-LQALGSYWHEGCLKCECCDSRLGDIGSSLYSKANLILCKRDYLRL 74
Query: 349 YDTLEKCCVCRKII--LDRILRATGKPYHPTCFSCVECGKSL-DGIPFTVDAMNQIHCID 405
+ C C K I + ++RA YH CF C C K L G F N++ C+D
Sbjct: 75 FGIPGVCSHCNKPIAAFELVMRARNNAYHIECFGCQRCRKRLVVGEAFCFHD-NKVLCLD 133
Score = 42.7 bits (96), Expect = 6e-04
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 355 CCVCRKIILDR-ILRATGKPYHPTCFSCVECGKSLDGIPFTV-DAMNQIHCIDDFHKKFA 412
C C + I D+ +L+A G +H C C C L I ++ N I C D+ + F
Sbjct: 17 CRSCNEPISDKYVLQALGSYWHEGCLKCECCDSRLGDIGSSLYSKANLILCKRDYLRLFG 76
Query: 413 -PRCCV-CELPIMPEEGQEETVRVVALDRSFHVKCYRCEDC-GLLLSSEAEGRGCYPLDD 469
P C C PI E + + A + ++H++C+ C+ C L+ EA C+ D+
Sbjct: 77 IPGVCSHCNKPIAAFE-----LVMRARNNAYHIECFGCQRCRKRLVVGEA---FCFH-DN 127
Query: 470 HILCKTCNARRVR 482
+LC A+ V+
Sbjct: 128 KVLCLDRCAKEVK 140
Score = 42.3 bits (95), Expect = 9e-04
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 293 GICVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNL-QGKPFYDVENEPYC 344
G+C C + I+ A N YH+ CF CQRC L G+ F +N+ C
Sbjct: 79 GVCSHCNKPIAAFELVMRARNNAYHIECFGCQRCRKRLVVGEAFCFHDNKVLC 131
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 52.4 bits (120), Expect = 8e-07
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 295 CVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQGKPFYDVENEPYCEADYYDTL-E 353
C CGE I G A A+ +H+ CF+C +C+ L + ++ +PYCE DY +
Sbjct: 89 CAGCGEAIKGSQA-LLALEKQWHLWCFSCTKCHC-LLSLEYMGMDGKPYCEKDYQELFGV 146
Query: 354 KCCVCRKIILDRILR 368
C C I ++L+
Sbjct: 147 TCAACNGYITGKVLQ 161
Score = 48.8 bits (111), Expect = 1e-05
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Query: 343 YCEADYYDTL-EKCCVCRKIILDRILRATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQI 401
YC+ DY + +KC C+ + I+ GK +H CF+C C + +
Sbjct: 6 YCKDDYQNQYGKKCDSCQLYLEGEIISIHGKNFHEACFACNSCRQPFPPSDKIIFTGTDY 65
Query: 402 HCIDDFHKKFAPRCCVCELPIMPEEGQEETVR----VVALDRSFHVKCYRCEDCGLLLSS 457
C + AP V + G E ++ ++AL++ +H+ C+ C C LLS
Sbjct: 66 LCQTCNNAPKAPTTKVSSPYLHTCAGCGEAIKGSQALLALEKQWHLWCFSCTKCHCLLSL 125
Query: 458 EAEG 461
E G
Sbjct: 126 EYMG 129
Score = 33.5 bits (73), Expect = 0.40
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 400 QIHCIDDFHKKFAPRCCVCELPIMPEEGQEETVRVVALDRSFHVKCYRCEDCGLLLSSEA 459
Q +C DD+ ++ +C C+L + EG+ ++ ++FH C+ C C
Sbjct: 4 QYYCKDDYQNQYGKKCDSCQLYL---EGEIISIH----GKNFHEACFACNSC--RQPFPP 54
Query: 460 EGRGCYPLDDHILCKTCN 477
+ + D+ LC+TCN
Sbjct: 55 SDKIIFTGTDY-LCQTCN 71
>SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26)
Length = 481
Score = 50.4 bits (115), Expect = 3e-06
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 291 VFGI-CVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQ-GKPFYDVENEPYCEADY 348
VFG C C + I A+GN YH+HCF C C L+ G+ F +N+ YC+AD+
Sbjct: 2 VFGTKCSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKDNKLYCKADF 61
Score = 41.1 bits (92), Expect = 0.002
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 354 KCCVCRKIIL--DRILRATGKPYHPTCFSCVECGKSLD-GIPFTVDAMNQIHCIDDFHK 409
KC C+K I + ++RA G YH CF C CG L+ G F + N+++C DF K
Sbjct: 6 KCSGCKKTIPANELVMRALGNVYHLHCFVCTMCGHILEKGQEFALKD-NKLYCKADFAK 63
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 46.8 bits (106), Expect = 4e-05
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 352 LEKCCVCRKIILDR-ILRATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQIHCIDDFHKK 410
+++C C+ I D+ +L+ +H C C +C L F+ + ++ C DF+++
Sbjct: 2 VQQCAGCQLPIADKFLLKVLDGVWHAQCVQCSDCKCPLTERCFSREG--KLFCKTDFYRR 59
Query: 411 FAPRCCVCELPIMPEEGQEETVRVVALDRSFHVKCYRCEDC 451
+ +C C+ I P + +V FHV C+ C C
Sbjct: 60 YGTKCSGCDQGISPNDMVRRAKHLV-----FHVDCFVCSYC 95
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 295 CVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNL-QGKPFYDVENEPY-CEADYY 349
C C + IS + A +HV CF C C + G Y + + + C DYY
Sbjct: 64 CSGCDQGISPNDMVRRAKHLVFHVDCFVCSYCKRQITTGDELYYIGDGSFICRDDYY 120
>SB_48895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 829
Score = 46.0 bits (104), Expect = 7e-05
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 293 GICVKCGERISGENAGCTAMGNTYHVHCFTCQRC-NVNLQGKPFYDVENEPYCEAD 347
G C C + I +G YH+HCFTC C N + G F+ V +CE D
Sbjct: 706 GACAVCAKLIPATELVMKVLGKVYHLHCFTCTTCHNQLVPGDRFHVVNGRLFCEND 761
Score = 35.9 bits (79), Expect = 0.074
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 349 YDTLEKCCVCRKII--LDRILRATGKPYHPTCFSCVECGKSL 388
Y C VC K+I + +++ GK YH CF+C C L
Sbjct: 702 YGNSGACAVCAKLIPATELVMKVLGKVYHLHCFTCTTCHNQL 743
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 44.0 bits (99), Expect = 3e-04
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 349 YDTLEKCCVCRKIILDRILR-ATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQIHCIDDF 407
+ +EKC C K + R A GK +H +C +C C KSLD D +I+C +
Sbjct: 4 FGVVEKCPRCSKTVYKAEERLAIGKKWHKSCLTCKCCNKSLDSTNL-ADKDGEIYCKGCY 62
Query: 408 HKKFAPR 414
K F P+
Sbjct: 63 GKNFGPK 69
Score = 36.7 bits (81), Expect = 0.042
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 295 CVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQGKPFYDVENEPYCEADY 348
C +C + + A+G +H C TC+ CN +L D + E YC+ Y
Sbjct: 10 CPRCSKTVYKAEERL-AIGKKWHKSCLTCKCCNKSLDSTNLADKDGEIYCKGCY 62
>SB_20996| Best HMM Match : LIM (HMM E-Value=9e-22)
Length = 81
Score = 43.6 bits (98), Expect = 4e-04
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 335 FYDVENEPYCEADYYDTLEKCCV-CRKIILDRILRATGKPYHPTCFSCVECGKSLDGIPF 393
F+D + PYCE Y+ C C+K I R + A + +HP F C C K L+ F
Sbjct: 4 FFDHDGRPYCEMHYHAKRGTLCYSCQKPITGRCITAMHRKFHPEHFVCAFCLKQLNKGTF 63
Query: 394 TVDAMNQIHCIDDFHKKF 411
+ ++ +C F K F
Sbjct: 64 K-EQNDKPYCHPCFVKLF 80
Score = 32.3 bits (70), Expect = 0.91
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Query: 294 ICVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQGKPFYDVENEPYC 344
+C C + I+G TAM +H F C C L F + ++PYC
Sbjct: 24 LCYSCQKPITGRCI--TAMHRKFHPEHFVCAFCLKQLNKGTFKEQNDKPYC 72
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 41.9 bits (94), Expect = 0.001
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 10/121 (8%)
Query: 311 AMGNTYHVHCFTCQRCNVNLQGKPFYDVENEPYC-EADYY----DTLE----KCCVCRKI 361
AM +H CF C+ CN L F Y E ++ D + C C +
Sbjct: 28 AMQANWHPDCFRCEICNDCLADTGFVKNAGSTYIPEGEHIMYMGDPVHPWHYNCFCCGRP 87
Query: 362 ILDRILRATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQIHCIDDFHKKFAPRCCVCELP 421
+ DR++ A GK +H F C +C K G + + +C +++ + C C
Sbjct: 88 VEDRVVHALGKAWHVEHFVCAKCEKPFYGHRY-YERKGLAYCETHYNELYGDICFECNKA 146
Query: 422 I 422
I
Sbjct: 147 I 147
Score = 41.9 bits (94), Expect = 0.001
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 295 CVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQGKPFYDVENEPYCEADYYDTL-E 353
C CG + E+ A+G +HV F C +C G +Y+ + YCE Y + +
Sbjct: 81 CFCCGRPV--EDRVVHALGKAWHVEHFVCAKCEKPFYGHRYYERKGLAYCETHYNELYGD 138
Query: 354 KCCVCRKII 362
C C K I
Sbjct: 139 ICFECNKAI 147
Score = 33.1 bits (72), Expect = 0.52
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 14/99 (14%)
Query: 360 KIILDRILRATGKPYHPTCFSCVECGKSLDGIPFTVDAMN-------QIHCIDDFHKKFA 412
K ++ R+++A +HP CF C C L F +A + I + D +
Sbjct: 19 KFVIGRVIKAMQANWHPDCFRCEICNDCLADTGFVKNAGSTYIPEGEHIMYMGDPVHPWH 78
Query: 413 PRCCVCELPIMPEEGQEETVRVVALDRSFHVKCYRCEDC 451
C C P+ E+ V V AL +++HV+ + C C
Sbjct: 79 YNCFCCGRPV------EDRV-VHALGKAWHVEHFVCAKC 110
>SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14)
Length = 82
Score = 37.9 bits (84), Expect = 0.018
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 347 DYYDTLEKCCVCRK-IILDRILRATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQIHCID 405
D+ ++ C C + I A GK +H CF CV C + L F ++++C
Sbjct: 3 DFPSSINYCATCGEPCIKTEYKYAIGKRFHNACFRCVVCEERL-STDFYARG-SELYCKK 60
Query: 406 DFHKKFAPRCCVC 418
D+ KF C +C
Sbjct: 61 DYLSKFNSVCHIC 73
Score = 36.7 bits (81), Expect = 0.042
Identities = 21/65 (32%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Query: 295 CVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQGKPFYDVENEPYCEADYYDTLEK 354
C CGE + A+G +H CF C C L FY +E YC+ DY
Sbjct: 11 CATCGEPCI-KTEYKYAIGKRFHNACFRCVVCEERL-STDFYARGSELYCKKDYLSKFNS 68
Query: 355 CC-VC 358
C +C
Sbjct: 69 VCHIC 73
>SB_20327| Best HMM Match : LIM (HMM E-Value=4.9e-16)
Length = 339
Score = 37.5 bits (83), Expect = 0.024
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 291 VFGI-CVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNL-QGKPFYDVENEPYCEADY 348
+FG C KC S + A YH+ CF C C+ L G F E+ +C+AD
Sbjct: 79 LFGTKCAKCSLNFSKNDFVMRARNKIYHIDCFRCVACSRQLVPGDEFALREDGLFCKAD- 137
Query: 349 YDTLEK 354
++ +EK
Sbjct: 138 HEIVEK 143
Score = 32.3 bits (70), Expect = 0.91
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 364 DRILRATGKPYHPTCFSCVECGKSL 388
D ++RA K YH CF CV C + L
Sbjct: 95 DFVMRARNKIYHIDCFRCVACSRQL 119
>SB_30029| Best HMM Match : Extensin_2 (HMM E-Value=0.45)
Length = 622
Score = 36.7 bits (81), Expect = 0.042
Identities = 35/125 (28%), Positives = 50/125 (40%), Gaps = 12/125 (9%)
Query: 147 NLQYMTLPLPNPSSGVHQEYMMPVLSKSPVTTNSEEYMP-PPSPVSSNYSELAR------ 199
N+QY T P P H M P + P T M PPS + +++ +
Sbjct: 315 NIQYPTTPPQQPGQP-HPYMMSPSMKPMPQTQQYYNNMGMPPSMMGPSHNPMGMPQRQGT 373
Query: 200 -ANANLNYNHDRTC--PPVYQNNFPEYNMS-QAPTYESFYEPISPHPSSKTAMQENNLIT 255
AN D T YQ FP+ N Q P Y + + +P+P S+ MQ + I
Sbjct: 374 MANQVAKSQPDMTPYQQQQYQQRFPQPNYPPQLPPYMASRQSQNPNPMSRVPMQHHQPIL 433
Query: 256 KKEAL 260
K A+
Sbjct: 434 PKPAV 438
>SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 35.9 bits (79), Expect = 0.074
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 316 YHVHCFTCQRCNVNLQGKPFYDVENEPYCEADYYDT 351
+H CF C+ C + L K + + PYC+A Y T
Sbjct: 213 WHKGCFKCESCGMTLNMKTYKGYQKLPYCDAHYPKT 248
>SB_59654| Best HMM Match : LIM (HMM E-Value=0.0026)
Length = 56
Score = 35.1 bits (77), Expect = 0.13
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 295 CVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQGKPFYD 337
C KC + + G +G T+H CFTC CN +L D
Sbjct: 12 CPKCDKTVYSAE-GQALLGMTFHKRCFTCTTCNKSLDSTTVAD 53
Score = 33.1 bits (72), Expect = 0.52
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 354 KCCVCRKIILDRILRAT-GKPYHPTCFSCVECGKSLD 389
KC C K + +A G +H CF+C C KSLD
Sbjct: 11 KCPKCDKTVYSAEGQALLGMTFHKRCFTCTTCNKSLD 47
Score = 29.5 bits (63), Expect = 6.4
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 6/45 (13%)
Query: 413 PRCCVCELPIMPEEGQEETVRVVALDRSFHVKCYRCEDCGLLLSS 457
P+C C+ + EGQ L +FH +C+ C C L S
Sbjct: 10 PKCPKCDKTVYSAEGQ------ALLGMTFHKRCFTCTTCNKSLDS 48
>SB_57743| Best HMM Match : LIM (HMM E-Value=1.7e-08)
Length = 197
Score = 34.7 bits (76), Expect = 0.17
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 353 EKCCVCRK-IILDRILRATGKPYHPTCFSCVECGKSLDGIPFT-VDAMNQIHCI 404
+KC C K + +A GK +H C +C C K LD T DA Q + +
Sbjct: 3 DKCPRCEKPVYFAEQAKANGKSWHKPCLTCKHCNKRLDSTNLTNKDANRQSYSL 56
>SB_20358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1323
Score = 34.3 bits (75), Expect = 0.23
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 295 CVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQ-GKPFYDVENEPYC 344
C+ CGER+ A +H CF C RCN +L+ G + E+E +C
Sbjct: 611 CLICGERVYLMER-LVAERRLFHRACFRCSRCNSSLRAGTYTFFPESESFC 660
>SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 33.9 bits (74), Expect = 0.30
Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 9/98 (9%)
Query: 295 CVKCGERISGENAGCTAMGNTYH--VHCFTCQRCNVNLQGKPFYDVENEPYCEADYYDTL 352
C C E NA T + N + H +C+ CNV K E + +
Sbjct: 60 CSICDEEFHDWNALMTHIRNQKNNPEHKNSCKECNVQFADKR----EKRRHVRVSHPPPQ 115
Query: 353 E--KCCVCRKIILDR-ILRATGKPYHPTCFSCVECGKS 387
KC +C K+ ++ LR + ++P F C ECGK+
Sbjct: 116 GELKCHICEKVYSNKHYLRDHIRTHNPDGFKCPECGKN 153
>SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1712
Score = 33.1 bits (72), Expect = 0.52
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 18/89 (20%)
Query: 158 PSSGVHQEYMMPVLSKSPVTTNSEEYMPPPSPVSSNYSELARANANLNYNHDRTCPPVYQ 217
PS G Y V + + S+ + PPP+P ++NY L+ A + D+ CPP
Sbjct: 1636 PSRGTLSRYNGSVTESTDLAYESDLFAPPPTP-NTNY--LSEA----THLSDQECPP--- 1685
Query: 218 NNFPEYNMSQAPTYESFYEPISPHPSSKT 246
S T SF++P P PS T
Sbjct: 1686 --------SPTATERSFFQPYPPPPSPVT 1706
>SB_17603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 826
Score = 32.7 bits (71), Expect = 0.69
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 11/130 (8%)
Query: 152 TLPLPNP-SSGVHQEYMMPVLSKS--PVTTNSEEYMPPPS---PVSSNYSELARANANLN 205
T P P P SSG Q P ++ P + + + Y P P+ S + + + +
Sbjct: 220 TSPYPMPTSSGPFQGSYTPSSTQQNYPPSLSQQSYAPATQQAYPLESQQNYPPMSQQSYS 279
Query: 206 YNHDRTCPPVYQNNFP-EYNMSQAPTYESFYEPISPHPSSKTAMQENNLITKKEA---LS 261
++ PP Q +FP S PT + Y P +P S Q++ L T +++ S
Sbjct: 280 PMSQQSFPPTSQQSFPRSAQQSYPPTSQQSYPP-TPQQSYPLTSQQSYLPTSQQSYPPTS 338
Query: 262 KRSPLPKEQE 271
++S P Q+
Sbjct: 339 QQSYPPSPQQ 348
>SB_3686| Best HMM Match : Myotub-related (HMM E-Value=2.8e-08)
Length = 629
Score = 31.9 bits (69), Expect = 1.2
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 9/62 (14%)
Query: 188 SPVSSNYSELARANANLNYNHD----RT---CPPVYQNNFPEYNMSQAPTYESFYEPISP 240
+P+ +NYS L + AN+NY H RT PP+ + S PT F P+ P
Sbjct: 566 NPIMANYSALQQTPANVNYGHQTLVVRTQPSAPPLTDHQMEHAFASYHPTV--FNTPLGP 623
Query: 241 HP 242
P
Sbjct: 624 PP 625
>SB_23899| Best HMM Match : TNFR_c6 (HMM E-Value=7.1e-09)
Length = 533
Score = 31.5 bits (68), Expect = 1.6
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 369 ATGKPYHPTCFSC--VECGKSLDG---IPFTVDAMNQIHCIDDFHKKFAPRCCVCELPIM 423
+TG+ C S +CGK + G +P D + C D K P C V L +
Sbjct: 153 STGRIILRNCTSTENAKCGKCMSGYYELPVVADCRKCVQCCHDGKDKETPGCAVVGLCME 212
Query: 424 PEEGQEET 431
EG ET
Sbjct: 213 RHEGCPET 220
>SB_38060| Best HMM Match : ITAM (HMM E-Value=1.3)
Length = 401
Score = 31.1 bits (67), Expect = 2.1
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 9/67 (13%)
Query: 184 MPPPSPVSSNYSELARANANLNY---NHDRTCPPVYQNNFPEYNMSQAPTYESFYEPISP 240
M PP PV S SEL R AN + + D C + P ++ P Y+S + P
Sbjct: 341 MDPP-PVYSESSEL-RTTANKTFPCNDDDYVCMDGSEYETPANQFAECPLYQS----VPP 394
Query: 241 HPSSKTA 247
HPSS A
Sbjct: 395 HPSSDKA 401
>SB_37808| Best HMM Match : Avirulence (HMM E-Value=2.8)
Length = 645
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 9/70 (12%)
Query: 153 LPLPNPSSGVHQEYMMPVLSKSPVTTNSE---EYMPPPSPVS------SNYSELARANAN 203
L +PNP+SG Q + P+ S SP + + + + PSP S SN + LA N N
Sbjct: 491 LAIPNPNSGHRQSNVAPLASPSPNSGHQQGNVSQLALPSPNSGHRQGNSNVAPLAIPNPN 550
Query: 204 LNYNHDRTCP 213
+ P
Sbjct: 551 SGHRQSNVAP 560
Score = 29.9 bits (64), Expect = 4.9
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 7/58 (12%)
Query: 153 LPLPNPSSGVHQEYMMPVLSKSPVTTNSEEYMPP---PSPVS----SNYSELARANAN 203
L +PNP+SG Q + P+ S SP + + + + P PSP S N ++LA + N
Sbjct: 353 LAIPNPNSGHRQSNVAPLASPSPNSGHRQGNVAPLALPSPNSGHRQGNVAQLALPSPN 410
>SB_2694| Best HMM Match : LIM (HMM E-Value=6.6e-14)
Length = 446
Score = 31.1 bits (67), Expect = 2.1
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 356 CVCRKIILDRILRATGKPYHPTCFSCVECGKSLDGIPFTV--DAMN 399
C R +++L A G +H +CF+C +C K LD V DA N
Sbjct: 221 CEKRAYAAEQVLGA-GFNWHKSCFNCYKCHKKLDSTTVAVHKDARN 265
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 31.1 bits (67), Expect = 2.1
Identities = 30/132 (22%), Positives = 47/132 (35%), Gaps = 9/132 (6%)
Query: 321 FTCQRCNVNLQGKP-FYDVENEPYCEADYYDTLEKCCVCRKIILDRILRATGKPYHPTCF 379
F C CN + + E E D+ KC VC K + + T K H
Sbjct: 1059 FKCSHCNETFSNRQSLIKHQREVTAEGDF-----KCDVCEKCFITKAHLKTHKVVHTRQP 1113
Query: 380 SCVECGKSLDGIPFTVDAMNQIHCID-DFHKKFAPRCCVCELPIMPEEGQEETVRVVALD 438
C C ++ D + + C + KK C VC+ + VR + D
Sbjct: 1114 RCPSCKETFDS-KENLKQHSSAGCPEKSSQKKEEYTCEVCDKVFSRVSSYKTHVRFHSKD 1172
Query: 439 RSFHVKCYRCED 450
+ KC+ C++
Sbjct: 1173 TT-GWKCHHCDE 1183
Score = 29.5 bits (63), Expect = 6.4
Identities = 21/75 (28%), Positives = 28/75 (37%), Gaps = 9/75 (12%)
Query: 321 FTCQRCNVNLQGKP-FYDVENEPYCEADYYDTLEKCCVCRKIILDRILRATGKPYH---P 376
F C CN + + E E D+ KC VC K + + T K H P
Sbjct: 942 FKCSHCNETFSNRQSLIEHHREVTAEGDF-----KCDVCEKCFITKAHLKTHKVVHTRQP 996
Query: 377 TCFSCVECGKSLDGI 391
C SC E S + +
Sbjct: 997 RCSSCKETFDSKENL 1011
>SB_25073| Best HMM Match : Extensin_2 (HMM E-Value=0.27)
Length = 744
Score = 31.1 bits (67), Expect = 2.1
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Query: 163 HQEYMMPVLS--KSPVTTNSEEYMPPPSPVSSNYSELARANANLNYNHDRTCPPVYQNNF 220
H + PV +PV N E + SPVS + S L N HD+T PV +
Sbjct: 314 HDQTSSPVSGDDSAPVPVNQEGHDQTSSPVSGDDSALVPVNQE---GHDQTSSPVSGDGS 370
Query: 221 PEYNMSQAPTYESFYEPISPHPSSKTAM-QENNLITKKEALSKRS-PLPKEQE 271
++Q ++ P+S + S+ + QE + T S P+P QE
Sbjct: 371 APVPVNQ-EGHDQTSSPVSGNDSAPVPVNQEGHDQTSSPVSGNDSAPVPVNQE 422
Score = 30.7 bits (66), Expect = 2.8
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 10/123 (8%)
Query: 154 PLPNPSSGVHQEYMMPVLSK--SPVTTNSEEYMPPPSPVSSNYSELARANANLNYNHDRT 211
P+P G H + PV +PV N E + SPVS N S N HD+T
Sbjct: 394 PVPVNQEG-HDQTSSPVSGNDSAPVPVNQEGHDQTSSPVSGNDSAPVPVNQE---GHDQT 449
Query: 212 CPPVYQNNFPEYNMSQAPTYESFYEPISPHPSSKTAM-QENNLITKK--EALSKRSPLPK 268
PV ++ ++Q ++ P+S S+ + QE + T + +P+P+
Sbjct: 450 SSPVSGDDSAPVPVNQ-EGHDQTSSPVSGDDSAPVPVNQEGHDQTSSVVTGSTNEAPVPE 508
Query: 269 EQE 271
+E
Sbjct: 509 NKE 511
>SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05)
Length = 639
Score = 30.7 bits (66), Expect = 2.8
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 7/89 (7%)
Query: 176 VTTNSEEYMPPPSPVSSNYSELARANANLNYNHDRTCPPVYQNNFPEYNMSQAPTYESFY 235
VT+ SEE P+P E A + N +H P + N P+ + Q PT
Sbjct: 439 VTSPSEEQPAEPTPEEHVEPEPTLATGSSNPHHHGN-PHPHGNPRPKPQLPQRPT----- 492
Query: 236 EPISPHPSSKTAMQENNLITKKEALSKRS 264
PI PHP + M ++ ++ L S
Sbjct: 493 -PIQPHPEVQQTMGAQSIRQGQQPLPSYS 520
>SB_52967| Best HMM Match : zf-CCCH (HMM E-Value=4.7)
Length = 226
Score = 30.3 bits (65), Expect = 3.7
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 7/93 (7%)
Query: 151 MTLPLPNPSSGVHQEYMMPVLSKSPVTTNSEEYMPPP-SPVSSNYSE-LARANANLNYNH 208
++ PL P SG +M LSK + S+ + P P+ +S+ L + N Y+H
Sbjct: 4 LSKPLMRPLSGP----LMRPLSKPLMRPFSKPLIRPILEPLMRPFSKPLCDHSQNPLYDH 59
Query: 209 DRTCPPVYQNNFPEYNMSQAPTYESFYEPISPH 241
+ P + P Y+ SQ P Y+ F P+ H
Sbjct: 60 SQN-PLCDHSQNPLYDHSQNPLYDHFQNPLCDH 91
>SB_25818| Best HMM Match : Pkinase (HMM E-Value=1.7e-20)
Length = 956
Score = 30.3 bits (65), Expect = 3.7
Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 4/81 (4%)
Query: 163 HQEYMMPVLSKSPVTTNSEEYMPPPSPVSSNYSELARANANLNYNHDRTCPPVYQNNFPE 222
H + P P ++ ++ PPP PV N+ L + + PP YQ+ FP
Sbjct: 220 HAMFEFPEEILPPPDQDAYDFQPPPLPVE-NHGPLTEGIPD---EAELPPPPNYQDLFPH 275
Query: 223 YNMSQAPTYESFYEPISPHPS 243
P Y + P P+
Sbjct: 276 IMGPYGPVEPPSYSELGPPPA 296
>SB_42688| Best HMM Match : PB1 (HMM E-Value=0.12)
Length = 1338
Score = 29.9 bits (64), Expect = 4.9
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 2/73 (2%)
Query: 144 GTHNL--QYMTLPLPNPSSGVHQEYMMPVLSKSPVTTNSEEYMPPPSPVSSNYSELARAN 201
G HN ++ L P G+ Q M+P+L +SP +E + A+
Sbjct: 638 GVHNELHAFLKLRFHAPGIGLKQGEMVPLLRQSPYRDTIKEVKKRVKQEKKEQKKAAKQQ 697
Query: 202 ANLNYNHDRTCPP 214
AN N +RT P
Sbjct: 698 ANTMRNLERTKEP 710
>SB_37776| Best HMM Match : fn3 (HMM E-Value=1.4e-22)
Length = 1296
Score = 29.9 bits (64), Expect = 4.9
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 176 VTTNSEEYMPPPSPVSSNYSELARANANLNYNHDRTCPPVYQNNFPEYNMSQAPTYESFY 235
V+ + P S VS + SE+ A + + P Y + ++ +A +Y
Sbjct: 856 VSDSDNSVSPAHSLVSLSDSEVDAEIARKLHEGGESRPLSYSGEPDKSHLYRAVSYLKSV 915
Query: 236 EPISPHPSSKTAMQENNLITKKEALSKRSPLP-KEQEVDALTNLLVQSITDSQDLDVFGI 294
+ S +S+ + N + + S+ SP K++E +A+TNL TDS LD +
Sbjct: 916 DTGSASDTSEMDDKNVNTLDRDRRQSRLSPQHNKDKEQEAVTNLKDIKCTDS--LDQLKV 973
Query: 295 C 295
C
Sbjct: 974 C 974
>SB_26487| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 29.9 bits (64), Expect = 4.9
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 6/98 (6%)
Query: 179 NSEEYMPPPSPVSSNYSELARANANLNY-----NHDRTCPPVYQNN-FPEYNMSQAPTYE 232
+S ++ P P+ S+ R++ N +Y + P QN +PE + P
Sbjct: 416 DSTAFVSPDPPLPRATSQRNRSSTNESYLRASRGTSQPYPSQSQNTAYPESPDTPQPQAS 475
Query: 233 SFYEPISPHPSSKTAMQENNLITKKEALSKRSPLPKEQ 270
S + P P P S + + + E+ R PL Q
Sbjct: 476 SSFLPEQPRPRSHSQTSRRSRASTSESRKPRDPLGSRQ 513
>SB_12127| Best HMM Match : Endonuclease_NS (HMM E-Value=2.9e-35)
Length = 1577
Score = 29.9 bits (64), Expect = 4.9
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 273 DALTNLLVQSITDSQDLDVFG--ICVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNL 330
D TNL ++ + S DL V +C +C + + ++GC T + +C+ C +
Sbjct: 431 DRCTNLEIRD-SGSGDLGVDDPYMCQRCTD-VKTSDSGCGDTSITDNYYCYRCYNLSTRS 488
Query: 331 QGKPFYDVEN 340
G +DV N
Sbjct: 489 VGSGEFDVRN 498
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 29.5 bits (63), Expect = 6.4
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 157 NPSSGVHQEYMMPVLSKSPVTTNSEEYMPPPSPVSSNYSELARANANLNYNHDRTCPPVY 216
+PSSG Y S SP + + P SP S +YS + + + + ++ T P Y
Sbjct: 444 SPSSG----YSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS-Y 498
Query: 217 QNNFPEY---NMSQAPTYESFYEPISP 240
P Y + S +PT S Y P SP
Sbjct: 499 SPTSPSYSPTSPSYSPTSPS-YSPTSP 524
Score = 29.1 bits (62), Expect = 8.5
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 10/104 (9%)
Query: 172 SKSPVTTNSEEYMPPPSPVSSNYSELARANANLNYNHDRTCP------PVYQNNFPEY-- 223
S SP + + P SP S +YS + + + + ++ T P P Y P Y
Sbjct: 511 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 570
Query: 224 -NMSQAPTYESFYEPISPHPSSKTAMQENNLITKKEALSKRSPL 266
+ S +PT S Y P SP S + +NL L PL
Sbjct: 571 TSPSYSPTSPS-YSPSSPSYSPSSPSFHHNLRPTPPPLPLSIPL 613
>SB_43092| Best HMM Match : 7tm_1 (HMM E-Value=0.23)
Length = 417
Score = 29.5 bits (63), Expect = 6.4
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 172 SKSPVTTNSEEYMPPPSPVSSNYSELARANANLNYNHDR-TCPPVYQNNFPEYNMSQAPT 230
+++P T +EE +P S YS L + + NL+Y+ +R P+ +F S T
Sbjct: 19 TEAPFATPAEEGTSEETP-SRKYSSLLKVDENLSYDTNREEDSPISTESFISKRGSAVGT 77
Query: 231 YE-SFYEPISPHPSS-KTAMQENNLITKKEA 259
E + + ++P S +TA + N ++K A
Sbjct: 78 DERTLSDVLTPSDDSCETARETVNSTSQKHA 108
>SB_6095| Best HMM Match : 7tm_1 (HMM E-Value=0.013)
Length = 872
Score = 29.5 bits (63), Expect = 6.4
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 154 PLPNPSSGVHQEYMMPVLSKSPVTTNSEEYMPPPSPVSSNYSELARANANLNYNHDRT 211
P N S + M P P N PPPSPVSS ++L + + + + D T
Sbjct: 777 PSYNAYSYSEDDVMPPTPPPPPRVMNGLPPSPPPSPVSSTGTQLDPSRSQYSLDWDPT 834
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.1 bits (62), Expect = 8.5
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 169 PVLSKSPVTTNSEEYMPPPSPVSSNYSELARANANLNYNHDRTCPPVYQNNFPEYNMSQA 228
P +S SP++ S P P P SSN S N + + + + + P ++ P N S
Sbjct: 463 PSISTSPISNPSPRPHPSPHP-SSNPSPNPSPNPSSDPSPNPSSNP---SSDPSPNPSSN 518
Query: 229 PTYESFYEPISPHPSSKTAMQEN 251
P+ E PIS +PS T+ N
Sbjct: 519 PSSEPSPNPIS-NPSISTSPISN 540
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 29.1 bits (62), Expect = 8.5
Identities = 26/109 (23%), Positives = 43/109 (39%), Gaps = 8/109 (7%)
Query: 164 QEYMMPVLSKSPVT---TNSEEYM-PPPSPVSSNYSELARANANLNYNHDRTCPPVYQNN 219
QE +P LS T T++ +Y+ PPPSP ++ + A + T P +
Sbjct: 128 QEEQIPTLSTLKTTATSTSTTKYIPPPPSPPTTTTTTTPETTAPRTTTPETTTP---ETT 184
Query: 220 FPEYNMSQAPTYESFY-EPISPHPSSKTAMQENNLITKKEALSKRSPLP 267
P T + E +P ++ KK +K++PLP
Sbjct: 185 TPRTTTPVTTTPRTTTPETTTPETTTPRTTTPETTTPKKTTAAKKAPLP 233
>SB_58407| Best HMM Match : TNFR_c6 (HMM E-Value=3.5e-05)
Length = 511
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 407 FHKKFAPRCCVCELPIMPEEGQEETVRVVALDRSFHVKCYRCEDCGLLLSS---EAEGRG 463
FH C +C P PE E + + + +C +C + G+ S+ + + R
Sbjct: 15 FHTNGTIYCKIC--PFCPEGQGVEPLCGSDITPNIEPRCVKCVE-GINFSASYDQEQCRP 71
Query: 464 CYPLDDHILCKTCNARRVRLLTN 486
CY D+ ++ K C R+ N
Sbjct: 72 CYQCDNQLVSKECTVTSNRVCLN 94
>SB_47578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 744
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 449 EDCGLLLSSEAEGRGCYPLDDHILCKTCNA 478
E CGL+ S +E RGCY D +L K +A
Sbjct: 406 EYCGLVKSLVSEARGCYSKLDPVLDKISHA 435
>SB_39447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2123
Score = 29.1 bits (62), Expect = 8.5
Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 5/86 (5%)
Query: 150 YMTLPLPNPSSGVHQEYMMPVLSKSPVTTNSEE-----YMPPPSPVSSNYSELARANANL 204
+M P PS+ HQ++ MP S V S+ P P+P +S A N +
Sbjct: 439 WMQAPWSKPSASSHQQHHMPQPSDGVVEPISQTDPVTFTKPGPTPGTSMAPSTAEDNTGV 498
Query: 205 NYNHDRTCPPVYQNNFPEYNMSQAPT 230
+T P + P S AP+
Sbjct: 499 VEPISQTDPVTFTKPGPTPGTSMAPS 524
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.132 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,414,658
Number of Sequences: 59808
Number of extensions: 735694
Number of successful extensions: 2000
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1838
Number of HSP's gapped (non-prelim): 135
length of query: 492
length of database: 16,821,457
effective HSP length: 85
effective length of query: 407
effective length of database: 11,737,777
effective search space: 4777275239
effective search space used: 4777275239
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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