GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001885-TA|BGIBMGA001885-PA|IPR001781|LIM, zinc-binding
         (492 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    29   0.37 
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     26   2.0  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   2.6  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   3.5  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           25   3.5  
AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-li...    25   3.5  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           25   6.1  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           24   8.1  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           24   8.1  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           24   8.1  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   8.1  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 28.7 bits (61), Expect = 0.37
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 154  PLPNPSSGVHQEYMMPVLSKS-PVTTNSEEYMPPPSP 189
            P+  P+ G   E      SKS P  T +E YM PPSP
Sbjct: 1022 PVGTPTDGAPSEGRRLSHSKSWPKGTENENYMVPPSP 1058


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 26.2 bits (55), Expect = 2.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 169 PVLSKSPVTTNSEEYMPPPSPVSSNYSELARANANLNYN 207
           P+++ S   TN++  + PPS  S  Y  L  AN +  +N
Sbjct: 561 PLMAMSTANTNNQPNVGPPSLGSDFYMNLDLANLDPVFN 599


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 14/41 (34%), Positives = 21/41 (51%)

Query: 282 SITDSQDLDVFGICVKCGERISGENAGCTAMGNTYHVHCFT 322
           SI     LD +G   + G   SG+ A   A+GN+   +CF+
Sbjct: 904 SINSLNSLDNYGDGGEAGTGDSGKRARMHALGNSDLANCFS 944


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 8/27 (29%)

Query: 366 ILRATGKPYHPT-----CF---SCVEC 384
           ++R TGKP+ PT     CF   SC+EC
Sbjct: 20  VVRGTGKPFLPTSFLIYCFVSPSCLEC 46


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 180 SEEYMPPPSPVSSNYSEL-------ARANANLNYNHDRTCPPVYQNNFPEYNMSQAPTYE 232
           S  Y  PPSP +S+Y  +       + +N++  Y H         ++    +MS + +  
Sbjct: 69  SSPYHAPPSPANSHYEPMECHSAVNSSSNSSTGYLHQHQQSSSSSSSSSSSSMSSSSS-S 127

Query: 233 SFYEPISP 240
           SF  P SP
Sbjct: 128 SFSSPDSP 135


>AJ278310-1|CAB93496.1|  219|Anopheles gambiae serine protease-like
           protein protein.
          Length = 219

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 11/23 (47%), Positives = 14/23 (60%)

Query: 419 ELPIMPEEGQEETVRVVALDRSF 441
           ELPIMP E  ++ +R   L R F
Sbjct: 112 ELPIMPNEECQKALRTTRLGRRF 134


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.6 bits (51), Expect = 6.1
 Identities = 12/61 (19%), Positives = 24/61 (39%)

Query: 154 PLPNPSSGVHQEYMMPVLSKSPVTTNSEEYMPPPSPVSSNYSELARANANLNYNHDRTCP 213
           P P  ++ V  +      + +P TT +    PPP P ++  +        +  ++    P
Sbjct: 213 PPPTTTTTVWIDPTATTTTHAPTTTTTWSDQPPPPPTTTTTTVWTDPTTTITTDYTTAYP 272

Query: 214 P 214
           P
Sbjct: 273 P 273


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 8.1
 Identities = 12/61 (19%), Positives = 24/61 (39%)

Query: 154 PLPNPSSGVHQEYMMPVLSKSPVTTNSEEYMPPPSPVSSNYSELARANANLNYNHDRTCP 213
           P P  ++ V  +      + +P TT +   +PPP P ++  +           ++    P
Sbjct: 213 PPPTTTTTVWIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYP 272

Query: 214 P 214
           P
Sbjct: 273 P 273


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 8.1
 Identities = 12/61 (19%), Positives = 24/61 (39%)

Query: 154 PLPNPSSGVHQEYMMPVLSKSPVTTNSEEYMPPPSPVSSNYSELARANANLNYNHDRTCP 213
           P P  ++ V  +      + +P TT +   +PPP P ++  +           ++    P
Sbjct: 213 PPPTTTTTVWIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYP 272

Query: 214 P 214
           P
Sbjct: 273 P 273


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.2 bits (50), Expect = 8.1
 Identities = 12/61 (19%), Positives = 24/61 (39%)

Query: 154 PLPNPSSGVHQEYMMPVLSKSPVTTNSEEYMPPPSPVSSNYSELARANANLNYNHDRTCP 213
           P P  ++ V  +      + +P TT +   +PPP P ++  +           ++    P
Sbjct: 212 PPPTTTTTVWIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYP 271

Query: 214 P 214
           P
Sbjct: 272 P 272


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 8.1
 Identities = 12/61 (19%), Positives = 24/61 (39%)

Query: 154 PLPNPSSGVHQEYMMPVLSKSPVTTNSEEYMPPPSPVSSNYSELARANANLNYNHDRTCP 213
           P P  ++ V  +      + +P TT +   +PPP P ++  +           ++    P
Sbjct: 213 PPPTTTTTVWIDPTATTTTHAPTTTTTWSDLPPPPPTTTTTTVWTDPTTTTTTDYTTAYP 272

Query: 214 P 214
           P
Sbjct: 273 P 273


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.132    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,656
Number of Sequences: 2123
Number of extensions: 22106
Number of successful extensions: 112
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 99
Number of HSP's gapped (non-prelim): 16
length of query: 492
length of database: 516,269
effective HSP length: 67
effective length of query: 425
effective length of database: 374,028
effective search space: 158961900
effective search space used: 158961900
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 50 (24.2 bits)