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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001884-TA|BGIBMGA001884-PA|IPR001005|Myb, DNA-binding,
IPR009057|Homeodomain-like
         (486 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit ...    55   3e-08
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos...    36   0.013
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc...    33   0.089
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||...    33   0.089
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S...    31   0.48 
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce...    30   0.63 
SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit Vps23|Schizosac...    30   0.63 
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa...    29   1.9  
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce...    28   2.5  
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch...    28   2.5  
SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5 |Schizosacch...    28   2.5  
SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog, Rhp...    28   3.4  
SPCP1E11.04c |pal1||membrane associated protein Pal1 |Schizosacc...    28   3.4  
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|...    28   3.4  
SPBC800.10c |||EPS15 repeat family actin cortical patch componen...    28   3.4  
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch...    27   4.4  
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc...    27   4.4  
SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces pom...    27   5.9  
SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces po...    27   5.9  
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos...    27   7.8  
SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces...    27   7.8  

>SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit
           Bdp1 |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 507

 Score = 54.8 bits (126), Expect = 3e-08
 Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 5/106 (4%)

Query: 121 NGEIILDEQSLVIKQSNNGRKVSSE---VREGAWNER--SSGYRRSARTADWTHDETVRF 175
           NG+I+LDE SL + +       + E   V E + + R  S+ +    +   W   +T +F
Sbjct: 317 NGQIVLDETSLEVDRHERDFVPAEEREYVEENSLSRRVTSATWGNRQKPEKWNAMDTEKF 376

Query: 176 YRALAAIGTDFTLMEPLFPGRTRRDXXXXXXXXXXXNIAQVDKALR 221
           Y+AL+  GTDF L+  +FP R RR            N A+V++AL+
Sbjct: 377 YKALSQWGTDFALIANMFPTRNRRQIKLKFKQEERRNPARVNQALK 422


>SPAC2E1P3.05c |||fungal cellulose binding domain
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 197

 Score = 35.9 bits (79), Expect = 0.013
 Identities = 18/51 (35%), Positives = 32/51 (62%)

Query: 414 LPVDLPPSLLNSVVGYVRKETTDSNASMVSSPMTSASPNSVASMDSRISVT 464
           +PVD+ PS  +S        TT S++ + S+ +TS+SP++V+S  S  S++
Sbjct: 104 IPVDIDPSSSSSSAASSTTSTTSSSSLVSSTTLTSSSPSAVSSTTSIPSIS 154


>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
           Shk1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 658

 Score = 33.1 bits (72), Expect = 0.089
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 9/92 (9%)

Query: 394 PNSPTKKMLQTYIAREKGKLLPVDLPPSLLNS--VVGYVRKETTDSNASMVSSPMTSA-S 450
           P S T    + Y +R      P   PP+  +S  ++     +TT SNAS   SP+ S+ S
Sbjct: 241 PTSATSSSSRLYPSR------PAPTPPASSSSSPLLSSQTVKTTTSNASRQPSPLVSSKS 294

Query: 451 PNSVASMDSRISVTPLQVNPSPNKRQRKNSYT 482
            +++    S + +TP  ++ S  K  R N+ T
Sbjct: 295 TDNIIRSHSPVLLTPQTLSTSETKHIRPNNST 326


>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 615

 Score = 33.1 bits (72), Expect = 0.089
 Identities = 39/154 (25%), Positives = 62/154 (40%), Gaps = 16/154 (10%)

Query: 329 STSSLATLSVRNNRKTQESKNSVSDMAVITKIDPKPANMLLDNISNPSMPSNIETGSLVV 388
           S  S A+ S  +     +  N V     ++  +P+P  +  D    P      ET +  V
Sbjct: 362 SQPSAASSSSSSEPSNLDKINDVKKNIEVSANEPQPRPVKEDV---PKSQVGGETDTTDV 418

Query: 389 LTVNDPNSPTKKMLQTYIAREKGKLLPVDLPPSLLNSVVGYVRKETTDSNASMVSSPMTS 448
           +  + P   T++   T +  E GK    + PP+     V      T  S A+  S+P  S
Sbjct: 419 INNSTPKEETEESPSTELP-ETGK----EQPPNKAEPAVPTEASSTKPSEAAEESTPRFS 473

Query: 449 ASPNS--------VASMDSRISVTPLQVNPSPNK 474
             PN         VA+++SR+   PL  +  PNK
Sbjct: 474 VRPNKFTGSRAGFVAALESRLQKGPLMRSFVPNK 507


>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 517

 Score = 30.7 bits (66), Expect = 0.48
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)

Query: 341 NRKTQESKNSVSDMAVITKIDPKPANM---LLDNISNPSMP-SNIETGSLVVLTVNDPNS 396
           N  T  S +S +  A ++    +P+N    L  NI  P +P SN+++ S     V  PN+
Sbjct: 212 NSSTSTSGSSSNVAAEVSNDASQPSNQDSSLNSNIVKPPLPPSNVQSNSSSSENVPKPNA 271

Query: 397 PTKKMLQTYIARE 409
            T++ L T  A E
Sbjct: 272 ETQEDLPTIDAHE 284


>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1036

 Score = 30.3 bits (65), Expect = 0.63
 Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 3/143 (2%)

Query: 329 STSSLATLSVRNNRKTQESKNSVSDMAVITKIDPKPANMLLDNISNPSMPSNIETGSLVV 388
           ++SS+ + S+ ++  T  S  S S  +  +      A     ++S+ +  ++  + SL  
Sbjct: 140 ASSSITSSSLASSSTTSSSLASSSTNSTTSATPTSSATS--SSLSSTAASNSATSSSLAS 197

Query: 389 LTVNDPNSPTKKMLQTYIAREKGKLLPVDLPPSLLNSVVGYVRKETTDSNASMVSSPMTS 448
            ++N   S T                   L  S LNS        ++ S+    S+P+TS
Sbjct: 198 SSLNSTTSATATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSISSTVSSSTPLTS 257

Query: 449 ASPNSVASMDSRISVTPLQVNPS 471
           ++  + A+  S  S +  Q N S
Sbjct: 258 SNSTTAATSASATS-SSAQYNTS 279


>SPAC11H11.01 |sst6|cps23|ESCRT I complex subunit
           Vps23|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 487

 Score = 30.3 bits (65), Expect = 0.63
 Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 3/75 (4%)

Query: 409 EKGKLLPVDLPPSLLNSVVGYVRKETTDSNASMVSSPMTSASP---NSVASMDSRISVTP 465
           E+    P +LP  L+N++     KE  ++   + + P +S+S      V ++ S++   P
Sbjct: 137 EREHTSPPELPTKLVNTIEKLKVKEENEAPPVIPAKPFSSSSEQHFRKVPALPSKLPPKP 196

Query: 466 LQVNPSPNKRQRKNS 480
           L++  + +  Q  NS
Sbjct: 197 LKITANSSLGQETNS 211


>SPCC18B5.03 |wee1||dual specificity protein kinase
           Wee1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 877

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 14/120 (11%)

Query: 363 KPANMLLDNISNPSMPSNIETGSLVVLTVNDPNSPTKKMLQTYIAREKGKL--LPVDLPP 420
           +P +   D+  +PS PSN +T S     +   N+PT       I  EK  +  L  D PP
Sbjct: 414 RPHSSSTDSPPSPSTPSNTQTDSYF---IQRENTPTNHNSIPTIQLEKSSMDFLRFDPPP 470

Query: 421 SLLNSVVGYVRKETTDSNASMVSSPMTSASPNSVA-SMDSRISVTPLQVNPSPNKRQRKN 479
           S + +   Y     ++       +    A  N+V+  MD R         PSP K +  N
Sbjct: 471 SAVKTSHNYGLPFLSNQRCPATPTRNPFAFENTVSIHMDGR--------QPSPIKSRNNN 522



 Score = 26.6 bits (56), Expect = 7.8
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 5/66 (7%)

Query: 419 PPSLLNSVVGYVRKETTDSNASMVSSPMTSASPNSVASMDSRISVTPLQVNPS----PNK 474
           P +   S+ G  RK+TT S +   ++P+   SP S      +I   P+   PS    PN 
Sbjct: 53  PNTSFTSLFG-PRKQTTSSPSFSHAAPLHPLSPPSFTHSQPQIQAQPVPRRPSLFDRPNL 111

Query: 475 RQRKNS 480
             R +S
Sbjct: 112 VSRSSS 117


>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1210

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 27/134 (20%), Positives = 60/134 (44%), Gaps = 3/134 (2%)

Query: 351 VSDMAVITKIDPKPANMLLDNISNPSMPSNIETGSLVVLTVNDPNSPTKKMLQTYIAREK 410
           ++DM  +  +  K +N  + ++ + S P+   T S+   +VN     +K + +  I  + 
Sbjct: 194 ITDMPHLAPLQRKNSNASIHSLGSSSRPTLTRTPSITSRSVNSVTERSKSLSKGRIENQF 253

Query: 411 GK--LLPVDLPPSLLN-SVVGYVRKETTDSNASMVSSPMTSASPNSVASMDSRISVTPLQ 467
           G+  LL   +P +L + S    + K T D     +S  + +     +A +   + + P  
Sbjct: 254 GQLYLLAGRVPNALKHFSTAIALSKATGDFLWQGLSLELFTVCLVIMAHLHVDVQIPPNI 313

Query: 468 VNPSPNKRQRKNSY 481
           ++  P+   R N++
Sbjct: 314 LSMFPSYNDRLNAF 327


>SPBC25B2.07c |mug164||microtubule-associated
           protein|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 501

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)

Query: 348 KNSVSDMAVITKIDPKPANMLLDNISNPSMP---SNIETG-SLVVLTVNDPNSPTKKM 401
           +NSV D    + ID   A++   NIS+PS+P   S +  G SL    +++P S T  +
Sbjct: 38  ENSVMDTEESSAIDKLSASLQQVNISSPSVPTSQSRVTQGQSLGNTQISNPTSKTNNV 95


>SPAC144.06 |apl5||AP-3 adaptor complex subunit Apl5
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 834

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 17/57 (29%), Positives = 27/57 (47%)

Query: 333 LATLSVRNNRKTQESKNSVSDMAVITKIDPKPANMLLDNISNPSMPSNIETGSLVVL 389
           L  + V  N++ ++   S S  A++   D  P  + L +I N   PSN    SL+ L
Sbjct: 741 LLIILVTKNKRRRKIFTSPSLQAMVVAQDEVPEGISLADIENKENPSNSNVYSLISL 797


>SPBC342.05 |crb2|rhp9, rhp9|DNA repair protein RAD9 homolog,
           Rhp9|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 778

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 1/86 (1%)

Query: 391 VNDPNSPTKKMLQTYIAREKGKLLPVDLPPSLLNSVVGYVRKETTDSNASMVSSPMTSAS 450
           +ND N P    + +           +D   S ++S+    R   + +N ++  S   S  
Sbjct: 276 INDENFPNPFNVISSYETSASPSTVID-QSSQVSSIFVNKRLRKSVNNQAISRSDSLSLD 334

Query: 451 PNSVASMDSRISVTPLQVNPSPNKRQ 476
              + S+ +R S+ PL+ + SPN R+
Sbjct: 335 TPKIDSLFTRASIKPLKPSQSPNSRR 360


>SPCP1E11.04c |pal1||membrane associated protein Pal1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 425

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 16/71 (22%), Positives = 28/71 (39%)

Query: 329 STSSLATLSVRNNRKTQESKNSVSDMAVITKIDPKPANMLLDNISNPSMPSNIETGSLVV 388
           S S L  +S  N   T +S   + +    T   P P+      ++    P + E+   + 
Sbjct: 343 SPSQLDPISNENESDTDDSNTGLRNRTSPTAAPPPPSRRKTGGLNTRPYPQHAESQMSLP 402

Query: 389 LTVNDPNSPTK 399
           LT  + + P K
Sbjct: 403 LTAKERSKPKK 413


>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 841

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 6/74 (8%)

Query: 413 LLPVDLPPSLLNSVVGYVRKETTDSNASMVSSPMTSASPNSVASMDSRISVTPLQVNPSP 472
           +LP+D+P S+      ++  +   S A  V S +    P SVA  +   S  P  +  S 
Sbjct: 672 ILPIDVPKSVAEETYSFLPSDVPKSEAEKVYSILPIDVPQSVA--EETYSFKPSDIPES- 728

Query: 473 NKRQRKNSYTITPL 486
              + +  Y+I P+
Sbjct: 729 ---EAEKIYSILPI 739


>SPBC800.10c |||EPS15 repeat family actin cortical patch component
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1116

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 411 GKLLPVDLPPSLLNSVVGYVRKETT--DSNASMVSSPMTSASPN 452
           GK LP  LP S+L+SV   ++K  +   S  S+V + ++S +PN
Sbjct: 330 GKELPKVLPSSMLSSVAPLMQKSKSVPTSIPSVVPANISSPNPN 373


>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
           Trk2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 880

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 5/107 (4%)

Query: 379 SNIETGSLVVLTVNDPNSPTKKMLQTYIAREKGKLLPVDLPPSLLNSVVGYVRKETTDSN 438
           ++I+ GSL V+  N  N+P    + +       + +P D  P + +           D+N
Sbjct: 235 ASIDNGSLSVVQNNARNNPVDFYIPSSFEESSFQTIPEDFEPQVHDHENQTQLNHHLDNN 294

Query: 439 ASMVSSPMTSASPN-----SVASMDSRISVTPLQVNPSPNKRQRKNS 480
           +S+ S   +  + N     +V+S +S  S T +  +P       +NS
Sbjct: 295 SSISSHNPSLETANDGNQETVSSSNSNYSTTRVDNDPHVASYSPQNS 341


>SPAC29B12.07 |sec16||multidomain vesicle coat component
           Sec16|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1995

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 20/93 (21%), Positives = 36/93 (38%)

Query: 304 EFXXXXXXXXXXXXXXXXXXEPGPGSTSSLATLSVRNNRKTQESKNSVSDMAVITKIDPK 363
           EF                  EPG  S  S     V + R++  S  S +   V  +I P+
Sbjct: 762 EFVSTSSYAPAANTRNAIIREPGILSPLSPRVQPVLSRRESIISMGSSASSYVPLEIAPR 821

Query: 364 PANMLLDNISNPSMPSNIETGSLVVLTVNDPNS 396
           P + L   +++   P N++  + +   +  PN+
Sbjct: 822 PMSSLEHTMNSAMSPGNLQRTANLYKPMTTPNA 854


>SPAC4G8.04 |||GTPase activating protein |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 772

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 14/63 (22%), Positives = 36/63 (57%), Gaps = 5/63 (7%)

Query: 335 TLSVRNNRKTQESKNSVSDMAVITKIDPKPANMLLDNISNPSMPS--NIETGSLVVLTVN 392
           ++S +N+   +  ++S+S +   + ++ KP ++   + + PSMPS  ++E G+++     
Sbjct: 305 SVSTKNSSSNKNLRSSLSKLLSTSNLNNKPLSL---SSTAPSMPSIGSVELGNMIPKETQ 361

Query: 393 DPN 395
            P+
Sbjct: 362 PPS 364


>SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 549

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 143 SSEVREGAWNERSSGYRRSARTADWTHDETVRF 175
           SS+ +   W++ S+G+R S+++ D  H +T  F
Sbjct: 204 SSDSKSVGWDDNSTGFRESSKSLD--HTDTSMF 234


>SPAC20G8.05c |cdc15||cell division control protein
           Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 927

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 12/50 (24%), Positives = 22/50 (44%)

Query: 431 RKETTDSNASMVSSPMTSASPNSVASMDSRISVTPLQVNPSPNKRQRKNS 480
           R   T     + + P+TS    S  + ++ +   P   + SP  ++ KNS
Sbjct: 403 RPSVTSPTFEVAARPLTSMDVRSSHNAETEVQAIPAATDISPEVKEGKNS 452


>SPBC1734.16c |pst3||SIN3 family co-repressor|Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1154

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 120  PNGE-IILDEQSLVIKQSNNGRKVSSEVREGAWNERSSGYRRSARTAD 166
            PN E + ++  +L + QS+  +K +       W E   G+R+S    D
Sbjct: 1091 PNTENVYINSYNLWVDQSSQSKKQNRTTNWRRWLESDEGWRKSKANTD 1138


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.310    0.125    0.347 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,574,537
Number of Sequences: 5004
Number of extensions: 54290
Number of successful extensions: 215
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 192
Number of HSP's gapped (non-prelim): 29
length of query: 486
length of database: 2,362,478
effective HSP length: 75
effective length of query: 411
effective length of database: 1,987,178
effective search space: 816730158
effective search space used: 816730158
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 56 (26.6 bits)

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