BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001884-TA|BGIBMGA001884-PA|IPR001005|Myb, DNA-binding, IPR009057|Homeodomain-like (486 letters) Database: mosquito 2123 sequences; 516,269 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 25 3.4 AY973196-1|AAY41590.1| 94|Anopheles gambiae defensin 4 protein. 25 6.0 AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein hom... 25 6.0 CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 24 7.9 CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. 24 7.9 >AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. Length = 1132 Score = 25.4 bits (53), Expect = 3.4 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%) Query: 434 TTDSNASMVSSPMTSASPNSVASMDSRISVTPLQVNPSPNKRQRKNSYTITPL 486 T S S SS + +SP+SVAS +SR S ++P + + +YT+ L Sbjct: 60 TYASALSPSSSSASPSSPSSVASPNSRAS----NMSPESSASDQSAAYTLQNL 108 >AY973196-1|AAY41590.1| 94|Anopheles gambiae defensin 4 protein. Length = 94 Score = 24.6 bits (51), Expect = 6.0 Identities = 14/44 (31%), Positives = 23/44 (52%) Query: 441 MVSSPMTSASPNSVASMDSRISVTPLQVNPSPNKRQRKNSYTIT 484 +VS+ MT A+P S S R + P Q+ +P Q +++ T Sbjct: 19 LVSTEMTFANPLSPNSPAERPHIQPFQMASAPLVAQSRSAMVQT 62 >AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein homolog protein. Length = 394 Score = 24.6 bits (51), Expect = 6.0 Identities = 12/41 (29%), Positives = 18/41 (43%) Query: 443 SSPMTSASPNSVASMDSRISVTPLQVNPSPNKRQRKNSYTI 483 SSP + P V S + Q P+P K + K+ Y + Sbjct: 180 SSPQITPRPTPVKSPYEWMKKQSYQSQPNPGKTRTKDKYRV 220 >CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal structural protein protein. Length = 1645 Score = 24.2 bits (50), Expect = 7.9 Identities = 13/30 (43%), Positives = 16/30 (53%) Query: 438 NASMVSSPMTSASPNSVASMDSRISVTPLQ 467 N S S SA NSVA+ S SVT ++ Sbjct: 1260 NVSQAGSRKNSADSNSVATHSSYYSVTGVE 1289 >CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein. Length = 1494 Score = 24.2 bits (50), Expect = 7.9 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 12/135 (8%) Query: 324 EPGPGSTSSLATLSVRNNRKTQESKNSVSDMAVITKIDPKPANMLLDNISNPSMPSNIET 383 EP + L T++ + TQ + S A I K PK IS P+ SN + Sbjct: 393 EPIAENGDLLETINEDESGHTQGPLDG-SLYATILK-SPKSPTATTHLISPPAEFSNGSS 450 Query: 384 GSLVVLTVNDPNSPTKKMLQT----YIARE---KGKLLPVDL-PPSLLNSVVG--YVRKE 433 SL++L N P P + +T Y+++ + +P L PP + G VR Sbjct: 451 KSLLLLNGNGPPPPVPERSKTPNSIYLSQNGTPRSTPVPFALAPPPAASPAFGDRSVRAV 510 Query: 434 TTDSNASMVSSPMTS 448 ++ SN+ V+S +S Sbjct: 511 SSASNSVSVNSSYSS 525 Database: mosquito Posted date: Oct 5, 2007 11:13 AM Number of letters in database: 516,269 Number of sequences in database: 2123 Lambda K H 0.310 0.125 0.347 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 334,466 Number of Sequences: 2123 Number of extensions: 10322 Number of successful extensions: 20 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 17 Number of HSP's gapped (non-prelim): 6 length of query: 486 length of database: 516,269 effective HSP length: 67 effective length of query: 419 effective length of database: 374,028 effective search space: 156717732 effective search space used: 156717732 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.8 bits) S2: 50 (24.2 bits)
- SilkBase 1999-2023 -