Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001883-TA|BGIBMGA001883-PA|undefined
(318 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g09710.1 68416.m01150 calmodulin-binding family protein low s... 40 0.002
At4g24680.1 68417.m03533 expressed protein 34 0.11
At5g16820.2 68418.m01971 heat shock factor protein 3 (HSF3) / he... 33 0.19
At5g16820.1 68418.m01970 heat shock factor protein 3 (HSF3) / he... 33 0.19
At1g35770.1 68414.m04447 Ulp1 protease family protein contains P... 32 0.58
At3g08790.1 68416.m01021 VHS domain-containing protein / GAT dom... 31 0.77
At1g32120.1 68414.m03952 expressed protein contains Pfam profile... 31 1.0
At2g40070.1 68415.m04923 expressed protein 30 1.8
At1g04540.1 68414.m00446 C2 domain-containing protein low simila... 30 1.8
At5g37380.2 68418.m04492 DNAJ heat shock N-terminal domain-conta... 30 2.4
At5g37380.1 68418.m04491 DNAJ heat shock N-terminal domain-conta... 30 2.4
At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containi... 30 2.4
At5g16600.1 68418.m01943 myb family transcription factor (MYB43)... 29 3.1
At4g31880.1 68417.m04531 expressed protein 29 3.1
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 29 5.4
At2g31920.1 68415.m03899 expressed protein 29 5.4
At1g77300.1 68414.m09002 SET domain-containing protein similar t... 29 5.4
At3g62610.1 68416.m07033 myb family transcription factor similar... 28 7.2
At1g58060.1 68414.m06580 helicase domain-containing protein cont... 28 7.2
At1g32400.2 68414.m03998 senescence-associated family protein co... 28 7.2
At1g32400.1 68414.m03997 senescence-associated family protein co... 28 7.2
At5g58850.1 68418.m07374 myb family transcription factor (MYB119... 28 9.5
At5g54350.1 68418.m06768 expressed protein ; expression support... 28 9.5
>At3g09710.1 68416.m01150 calmodulin-binding family protein low
similarity to SF16 protein [Helianthus annuus]
GI:560150; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 454
Score = 39.9 bits (89), Expect = 0.002
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 9/149 (6%)
Query: 20 NAENSENKNQQGPSTNDLQNVPKSPNATKHDNVAKTYQRASVANSPSKSP-HSSVITQNT 78
+ +NS N+N QG T N K ++TK + + + + N K P SS+ ++++
Sbjct: 288 SVKNSTNRNSQGGETAKSSNRNKLNSSTKPNTPSAS--STATRNPRKKRPIPSSIKSKSS 345
Query: 79 DRQPHVNRAATPVNKGNIT-PKLSDRVSVITSTAGVKSGVFASPHAKSSPLRKYIPSPVL 137
D + +++ + +I P +SD ++ +STA S + P KS+ + +
Sbjct: 346 DDEA---KSSERNRRPSIARPSVSDDETLSSSTARRSSNLI--PTTKSARGKPKSQTSSR 400
Query: 138 AAMNTAEVTNKAVTPEKSDAKKNSDSTKS 166
A+ T+ ++ PEK+ AKK ++ S
Sbjct: 401 VAVTTSTTEESSILPEKAPAKKRLSTSAS 429
>At4g24680.1 68417.m03533 expressed protein
Length = 1480
Score = 34.3 bits (75), Expect = 0.11
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 13/175 (7%)
Query: 4 RRARIKAVAALPPRRKNAENSENKNQQGPSTNDLQNVPKSPNATKHDNVAKTYQRASVAN 63
R A I+ + P + ++ Q TN+ ++ ++ N K +V +T QR S+ N
Sbjct: 962 RAAEIELGSVSVPSLDIKVSGDSSEQISSFTNE-ESQNRAKNNWKSQHVRRT-QRNSLVN 1019
Query: 64 SPSK--SPHSSVITQNTDRQPHVNRAATPVNKGNITPKLSDRVSVITSTAGVKSGVFASP 121
P++ S +++VI Q + +T P+ TS+ G +S
Sbjct: 1020 KPAEKFSGNNAVIWAPVHPQQKAD-VSTGGGSQTTVPEFG------TSSKSQHQGQTSSK 1072
Query: 122 HAKSSPLRKYIPSPVLAAMNTAEVTNKAVTPEKSDAKKNSDSTKSIGNNSTEIIQ 176
+K + +Y+P P++ M ++ +K + D +N + ++ G T I+Q
Sbjct: 1073 -SKRVEIERYVPKPIVKEM-AEQIVSKNLVTSAPDMSENVNQKENRGGEGTGILQ 1125
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 1/99 (1%)
Query: 8 IKAVAALPPRRKNAENSENKNQQGPSTNDLQNVPKSPNATKHDNVAKTYQRASVANSPSK 67
+KA A P + E N + + + QN N + ++ +T + AN S
Sbjct: 563 VKAELAAPGDPSLIQKIEGLNAKTRTNDGWQNSSSVVNRDEQESQPRTLNSGNSANKVSA 622
Query: 68 SPHSSVITQNTDRQPHVNRAATPVNKGNITPKLSDRVSV 106
H + ++ H N+ + NK N P S+
Sbjct: 623 RNHRTGHASDSKNSSHYNQGDSATNK-NAEPAAMGGTSI 660
>At5g16820.2 68418.m01971 heat shock factor protein 3 (HSF3) / heat
shock transcription factor 3 (HSTF3) identical to heat
shock transcription factor 3 (HSF3) SP:O81821 from
[Arabidopsis thaliana]
Length = 481
Score = 33.5 bits (73), Expect = 0.19
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 6/147 (4%)
Query: 22 ENSENKNQQGPSTNDLQNVPKSPNATKHDNVAKTYQRASVANSPSKSPHSSVITQNTDRQ 81
+N+ + N+Q P +N + +P + DNVA R V PS + QN RQ
Sbjct: 216 QNNNDGNRQIPGSNKKRRLPVDEQENRGDNVANGLNRQIVRYQPS----INEAAQNMLRQ 271
Query: 82 PHVNRAATPVNKGNITPKLSDRVSVITSTAGVKSGVFASPHAKSSPLRKYIPSPVLAAMN 141
+N + +P + S + + S+ V +G S L ++ P+ V +A N
Sbjct: 272 -FLNTSTSPRYESVSNNPDSFLLGDVPSSTSVDNG-NPSSRVSGVTLAEFSPNTVQSATN 329
Query: 142 TAEVTNKAVTPEKSDAKKNSDSTKSIG 168
+ A P+ + N + + G
Sbjct: 330 QVPEASLAHHPQAGLVQPNIGQSPAQG 356
>At5g16820.1 68418.m01970 heat shock factor protein 3 (HSF3) / heat
shock transcription factor 3 (HSTF3) identical to heat
shock transcription factor 3 (HSF3) SP:O81821 from
[Arabidopsis thaliana]
Length = 481
Score = 33.5 bits (73), Expect = 0.19
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 6/147 (4%)
Query: 22 ENSENKNQQGPSTNDLQNVPKSPNATKHDNVAKTYQRASVANSPSKSPHSSVITQNTDRQ 81
+N+ + N+Q P +N + +P + DNVA R V PS + QN RQ
Sbjct: 216 QNNNDGNRQIPGSNKKRRLPVDEQENRGDNVANGLNRQIVRYQPS----INEAAQNMLRQ 271
Query: 82 PHVNRAATPVNKGNITPKLSDRVSVITSTAGVKSGVFASPHAKSSPLRKYIPSPVLAAMN 141
+N + +P + S + + S+ V +G S L ++ P+ V +A N
Sbjct: 272 -FLNTSTSPRYESVSNNPDSFLLGDVPSSTSVDNG-NPSSRVSGVTLAEFSPNTVQSATN 329
Query: 142 TAEVTNKAVTPEKSDAKKNSDSTKSIG 168
+ A P+ + N + + G
Sbjct: 330 QVPEASLAHHPQAGLVQPNIGQSPAQG 356
>At1g35770.1 68414.m04447 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 968
Score = 31.9 bits (69), Expect = 0.58
Identities = 48/217 (22%), Positives = 82/217 (37%), Gaps = 16/217 (7%)
Query: 15 PPRRKNAENSENKNQQGPSTNDLQNVPKSPNATKHDNVAKTYQRASVANSPSKSPHSSVI 74
PP+ + +N+E N P+ D + P + ++ DN S+ SPS S V
Sbjct: 523 PPQAVSRDNTECGNNT-PNDEDFPSEPSMVHDSEGDN------NLSIGASPSPKVVSEVN 575
Query: 75 TQNTDRQPHVNRAATPVNKGNITPKLSDRVSVITSTAGVKSGVFASPHAKSSPLRKYIPS 134
Q ++ V +P N+ +++R + T V S + + + + +
Sbjct: 576 AQVSNGDA-VEDDLSPGRDVNVEADVNERHDISPVTGAVTSPKLSGDNVEVQ-CSQLTTT 633
Query: 135 PVLAAMNTAEVTNKAVTPEKSDAKKN-SDSTKSIGNNSTEIIQKIXXXXXXXXXXGTNTH 193
V N EV+ V PE + A S S+ N + Q+ G
Sbjct: 634 NVDTLTNEVEVS---VRPENTPANLAVSSPNHSVDNEEFQCSQQ---AAHDVDLLGNECE 687
Query: 194 RSDIPDDYSVPSVPESITEDPMDGIVPLQPVSAPKPI 230
S V SV ++ + D +VP+ VSA P+
Sbjct: 688 ESQGVPVVGVDSVSNEMSAELPDIVVPIPDVSADLPV 724
>At3g08790.1 68416.m01021 VHS domain-containing protein / GAT
domain-containing protein weak similarity to
HGF-regulated tyrosine kinase substrate [Mus musculus]
GI:1089781; contains Pfam profiles PF00790: VHS domain,
PF03127: GAT domain
Length = 607
Score = 31.5 bits (68), Expect = 0.77
Identities = 24/101 (23%), Positives = 41/101 (40%), Gaps = 4/101 (3%)
Query: 147 NKAVTPEKSDAKKNSDSTKSIGNNSTEIIQ--KIXXXXXXXXXXGTNTHRSDI--PDDYS 202
++A+ S KK S K + ++T+II TN + D+ DD+
Sbjct: 258 HEAIASGNSMIKKEEKSKKEVPKDTTQIIDVGSSETKNGSVVAYTTNGPKIDLLSGDDFE 317
Query: 203 VPSVPESITEDPMDGIVPLQPVSAPKPIALLKNEIISENVE 243
P+ S+ P+ P PV+ P +L + + N E
Sbjct: 318 TPNADNSLALVPLGPPQPSSPVAKPDNSIVLIDMLSDNNCE 358
>At1g32120.1 68414.m03952 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 1206
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 15 PPRRKNAENSENKNQQGPS---TNDLQNVPK---SPNATKHDNVAKTYQRASVANSPSKS 68
PPR A +S N PS + +L P SP+AT++ + + S NS S
Sbjct: 832 PPRSHEASSSRGYNHP-PSPRVSKELNKTPSISGSPSATRNKSPRSSENVNSCGNSSSGG 890
Query: 69 PHSSVITQNTDRQPHVNRAATPV 91
+SV+ +NTD V++ +P+
Sbjct: 891 --NSVVKRNTDTSIIVSKQESPI 911
>At2g40070.1 68415.m04923 expressed protein
Length = 607
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 58 RASVANSPSKSPHSSVITQNTDRQPHVNRAATPVNKGNITPKLSDRVSVITSTAGVKSGV 117
RA+V+++ S +S T + +P +T ++ +TP S + +AG +
Sbjct: 211 RATVSSATRPSLTNSRSTVSATTKPTPMSRSTSLSSSRLTPTASKPTTSTARSAGSVTRS 270
Query: 118 FASPHAKSS-PLRKYIPSPVLAAMNTAEVTNKAVTPEKSDAKKNSDSTKSIGNNS 171
S KS+ P R P A ++ + + P K+ ++ ++ + + I + S
Sbjct: 271 TPSTTTKSAGPSRSTTPLSRSTARSSTPTSRPTLPPSKTISRSSTPTRRPIASAS 325
>At1g04540.1 68414.m00446 C2 domain-containing protein low
similarity to cold-regulated gene SRC2 [Glycine max]
GI:2055230; contains Pfam profile PF00168: C2 domain
Length = 601
Score = 30.3 bits (65), Expect = 1.8
Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 16/156 (10%)
Query: 20 NAENSENKNQQGPSTNDLQNVPKSP--NATKHDN----VAKTYQRASVANSPSKSPHSSV 73
N+ +KN Q PS+ Q+V P TK D V+ RA + ++ P S++
Sbjct: 187 NSNKGSSKNPQSPSSRQYQSVISRPELRRTKSDTSSMVVSDLLSRAERSRLANRQPASAI 246
Query: 74 ITQ-------NTDRQPHVNRAATPVNKGNITPKLSDRVSVITSTAGVKSGVFASPHAKSS 126
++ TD + TP +K P+ R + I S + + H S
Sbjct: 247 VSSESETLPTTTDSDEKKSSEYTPPSKNLRVPR--QRYNSIESDL-INPSPMENHHVVVS 303
Query: 127 PLRKYIPSPVLAAMNTAEVTNKAVTPEKSDAKKNSD 162
++ P + T + K EK + K+ D
Sbjct: 304 RRERHDVMPYSSYQQTGKTPRKKTRIEKQRSVKDYD 339
>At5g37380.2 68418.m04492 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 29.9 bits (64), Expect = 2.4
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 8/119 (6%)
Query: 48 KHDNVAKTYQRASVANSPSKSPHSSVITQNTDRQPHVNRAATPVNKGNITPKLSDRVSVI 107
+ ++ YQ+ SV++S + + + T T+ + R P K N + ++ +
Sbjct: 128 RRKSLHSVYQKVSVSSSNNGFCNFAKTTFTTNARTTTPRNNPPAQKTNPPAQKTNPPAQK 187
Query: 108 TSTAGVKSGVFASPHAKSSPLRKYIPSPVLAAMNTAEVTNKAVTPEKSDAKKNSDSTKS 166
T+ K+ P K++P + PV T N TP A +SD +KS
Sbjct: 188 TNPPAQKNN---PPTQKNNPQK-----PVGTTQKTGRTDNHTTTPNSFTASGSSDQSKS 238
>At5g37380.1 68418.m04491 DNAJ heat shock N-terminal
domain-containing protein similar to SP|Q9QYI4 DnaJ
homolog subfamily B member 12 {Mus musculus}; contains
Pfam profile PF00226: DnaJ domain
Length = 431
Score = 29.9 bits (64), Expect = 2.4
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 8/119 (6%)
Query: 48 KHDNVAKTYQRASVANSPSKSPHSSVITQNTDRQPHVNRAATPVNKGNITPKLSDRVSVI 107
+ ++ YQ+ SV++S + + + T T+ + R P K N + ++ +
Sbjct: 128 RRKSLHSVYQKVSVSSSNNGFCNFAKTTFTTNARTTTPRNNPPAQKTNPPAQKTNPPAQK 187
Query: 108 TSTAGVKSGVFASPHAKSSPLRKYIPSPVLAAMNTAEVTNKAVTPEKSDAKKNSDSTKS 166
T+ K+ P K++P + PV T N TP A +SD +KS
Sbjct: 188 TNPPAQKNN---PPTQKNNPQK-----PVGTTQKTGRTDNHTTTPNSFTASGSSDQSKS 238
>At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 721
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Query: 35 NDLQNVPKSPNATKHDNVAKTYQRASVANSPSKSPHSSVITQNTDRQPHVNRAATPVNKG 94
+ +Q VP S + +K N++ + + + +PS + Q + + G
Sbjct: 83 DSVQPVP-SASKSKSSNLSSAAKSSKSSTTPSSAAQFGGSYSPARAQSRAS-SQVGAKTG 140
Query: 95 NITPKLSDRVSVITSTAGVKSGVFASPHAKSSPLRKYIPS 134
NI S+ SV T +G KS V + K P +PS
Sbjct: 141 NIIRPSSNSASVTTKPSGNKSSVSSKQSLKILPAGNLVPS 180
>At5g16600.1 68418.m01943 myb family transcription factor (MYB43)
contains PFAM profile: myb DNA binding domain PF00249
Length = 327
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Query: 17 RRKNAENSENKN-QQGPSTNDLQNVPKSPNATKHDNVAKTYQRASVANSPSKSPHSSVIT 75
R+K+ ++KN +Q T D Q + A + +N + + + P +PH +I
Sbjct: 141 RKKSLVPHDDKNPKQDQQTKDEQEQHQLEQALEKNNTSVSGDGFCIDEVPLLNPHEILID 200
Query: 76 QNTDRQPHVNRAATPVNKGNITPKLSDRVSVITSTAGVKSG 116
++ H N +N T S S + + V G
Sbjct: 201 ISSSHHHHSNDDNVNINTSKFTSPSSSSSSTSSCISSVVPG 241
>At4g31880.1 68417.m04531 expressed protein
Length = 873
Score = 29.5 bits (63), Expect = 3.1
Identities = 34/157 (21%), Positives = 60/157 (38%), Gaps = 6/157 (3%)
Query: 21 AENSENKNQQGPSTNDLQNVPKSPNATKHDNVAKTYQRASVAN-SPSKSPHSSVITQNTD 79
A +S+ K ++ K+ + +K A + AS S + P +V +
Sbjct: 709 AGSSKAKATPASKSSKTSQDDKTASKSKDSKEASREEEASSEEESEEEEPPKTVGKSGSS 768
Query: 80 RQPHVNRAATPVNKGNITPKLSDRVSVITSTAGVKSGVFASPHAKSSPLRKYIPS----- 134
R + + K + K + S T+++ KSG S AKS + S
Sbjct: 769 RSKKDISSVSKSGKSKASSKKKEEPSKATTSSKSKSGPVKSVPAKSKTGKGKAKSGSAST 828
Query: 135 PVLAAMNTAEVTNKAVTPEKSDAKKNSDSTKSIGNNS 171
P A +A + TP++ + + S KS G+ S
Sbjct: 829 PASKAKESASESESEETPKEPEPATKAKSGKSQGSQS 865
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 19 KNAENSENKNQQGPSTNDLQNVPKSPNATKHDNVAKTYQRASVANSPSKSPHSSVITQNT 78
K+ EN+E + PS +D + + SP + + Q A P P + ++ +
Sbjct: 504 KSPENAEENFPKSPSAHDGKAISFSPPTPSPPHPVRP-QLAQAGAPPPPPPLPAAASKPS 562
Query: 79 DRQPH-VNRAATPVNKGN 95
++ H V +A P+++GN
Sbjct: 563 EQLQHSVVQATEPLSQGN 580
>At2g31920.1 68415.m03899 expressed protein
Length = 585
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 204 PSVPESITEDPMDGIVPLQPVSAPKPIALLK 234
P+ P S+T P DGI L P P+AL K
Sbjct: 260 PASPISVTRSPKDGIKSLSKAVTP-PVALFK 289
>At1g77300.1 68414.m09002 SET domain-containing protein similar to
huntingtin interacting protein 1 [Homo sapiens]
GI:12697196; contains Pfam profile PF00856: SET domain
Length = 1759
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/107 (22%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Query: 132 IPSPVLAAMNTAEVTNKAVTPEKSDAKKNSDSTKSIGNNSTEIIQKIXXXXXXXXXXGTN 191
+ S A TA V+ P + N KS + ++ ++ TN
Sbjct: 1531 VTSSKAATPETASVSEGYSEPNSGLPETNGRKRKSRWDQPSKTKEQRIMTILSQQTDETN 1590
Query: 192 THRS---DIPDDYSVP--SVPESITEDPMDGIVPLQPVSAPKPIALL 233
++ D+P +S P VP++IT P + PVS P++++
Sbjct: 1591 GNQDVQDDLPPGFSSPCTDVPDAITAQPQQKFLSRLPVSYGIPLSIV 1637
>At3g62610.1 68416.m07033 myb family transcription factor similar to
myb-like transcription factor GI:168590 from [Zea mays]
Length = 343
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 84 VNRAATPVNKGNITPKLSDRVSVITSTAGVKSGVFAS--PHAKSSPLRKY 131
+N + + +GNITP+ D + + ST G + AS P + ++ Y
Sbjct: 58 INYLRSDIKRGNITPEEEDVIVKLHSTLGTRWSTIASNLPGRTDNEIKNY 107
>At1g58060.1 68414.m06580 helicase domain-containing protein
contains similarity to SP|P24785 Dosage compensation
regulator (Male-less protein) (No action potential
protein) {Drosophila melanogaster}; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain
Length = 1459
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 212 EDPMDGIVPLQPVSAPKPIALLKNEIISENVEVL 245
ED +DGI P VS P+P ++ E S + +
Sbjct: 207 EDEVDGIDPRNKVSGPRPFDVIAKEYYSARSDAI 240
>At1g32400.2 68414.m03998 senescence-associated family protein
contains Pfam profile PF00335: Tetraspanin family
Length = 280
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 62 ANSPSK--SPHSSVITQNTDRQPHVNRAATPVNKGNITPKLSDRVS 105
AN+P++ S + + RQP +NR A PV + P L R S
Sbjct: 188 ANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPS 233
>At1g32400.1 68414.m03997 senescence-associated family protein
contains Pfam profile PF00335: Tetraspanin family
Length = 280
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 62 ANSPSK--SPHSSVITQNTDRQPHVNRAATPVNKGNITPKLSDRVS 105
AN+P++ S + + RQP +NR A PV + P L R S
Sbjct: 188 ANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPS 233
>At5g58850.1 68418.m07374 myb family transcription factor (MYB119)
contains Pfam profile: PF00249 myb-like DNA binding
domain
Length = 430
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 42 KSPNATKHDNVAKTYQRASVANSPSKSPH 70
K+PN HD+V +Q A++ +P+ +PH
Sbjct: 326 KNPNPNLHDSVGIHHQEATI-TAPANTPH 353
>At5g54350.1 68418.m06768 expressed protein ; expression
supported by MPSS
Length = 279
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Query: 30 QGPSTNDLQNVPKSPNATKHDNVAKTYQRASVANSPSKSPHSSVITQNTDRQPHV 84
Q S++ PK P+ K + T + N+P + P V+ +NT P +
Sbjct: 4 QSVSSSSSSTTPKKPDQ-KLKSAVVTVEEKETMNNPEQRPPQEVVFENTIPDPEL 57
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.306 0.122 0.337
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,564,425
Number of Sequences: 28952
Number of extensions: 259692
Number of successful extensions: 846
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 837
Number of HSP's gapped (non-prelim): 27
length of query: 318
length of database: 12,070,560
effective HSP length: 81
effective length of query: 237
effective length of database: 9,725,448
effective search space: 2304931176
effective search space used: 2304931176
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 59 (27.9 bits)
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