BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA001882-TA|BGIBMGA001882-PA|IPR013621|Ion transport N-terminal, IPR005821|Ion transport, IPR000595|Cyclic nucleotide-binding, IPR003938|EAG/ELK/ERG potassium channel, IPR002373|cAMP-dependent protein kinase (620 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subun... 72 2e-13 SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 1.4 SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c... 29 1.9 SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 28 3.3 SPBC1703.03c |||armadillo repeat protein, unknown biological rol... 28 4.4 SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 27 7.7 >SPAC8C9.03 |cgs1||cAMP-dependent protein kinase regulatory subunit Cgs1|Schizosaccharomyces pombe|chr 1|||Manual Length = 412 Score = 72.1 bits (169), Expect = 2e-13 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 1/115 (0%) Query: 380 SLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNKMYFIQEGIVDIVMANG 439 SL+ VP ++ D + L+ V+Q G I+I++G IGN+ Y I++G ++V Sbjct: 271 SLLEEVPILSSLDKYQRQKIADALQTVVYQAGSIVIRQGDIGNQFYLIEDGEAEVVKNGK 330 Query: 440 EVATSLSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNAVL-DQYPLMR 493 V +L+ G YFGE+ L+ R A+V+A+T L + FN +L + LMR Sbjct: 331 GVVVTLTKGDYFGELALIHETVRNATVQAKTRLKLATFDKPTFNRLLGNAIDLMR 385 Score = 47.6 bits (108), Expect = 5e-06 Identities = 37/138 (26%), Positives = 70/138 (50%), Gaps = 17/138 (12%) Query: 382 VASVPFFANADSNFVSDVVTKLRYE-VFQPGDIIIKEGTIGNKMYFIQEGIVDI------ 434 VA F N D ++V+ + + + + G +I +G +G+ Y +++G D+ Sbjct: 138 VAGNFLFKNLDEEHYNEVLNAMTEKRIGEAGVAVIVQGAVGDYFYIVEQGEFDVYKRPEL 197 Query: 435 ------VMANG--EVATSLSDGSYFGEICLLTNARRVASVRAETYCN-LFSLSVDHFNAV 485 V+++G T++S G YFGE+ L+ NA R ASV ++T N +++L F + Sbjct: 198 NITPEEVLSSGYGNYITTISPGEYFGELALMYNAPRAASVVSKTPNNVIYALDRTSFRRI 257 Query: 486 LDQYPLMRRTM-ESVAAE 502 + + +R + ES+ E Sbjct: 258 VFENAYRQRMLYESLLEE 275 >SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces pombe|chr 1|||Manual Length = 1957 Score = 29.5 bits (63), Expect = 1.4 Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 7/92 (7%) Query: 280 SLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPREM 339 SL D + S + + +L++++ S ++ +EK+ QV+E +E+ Sbjct: 1468 SLDDKSFELASAVEKLGALQKLHSESLSLMENIKSQLQEAKEKI-QVDESTI-----QEL 1521 Query: 340 RQRITEYFEHRYQGKFFDEEVILGELSEKLRE 371 IT ++ Y+GK D++ I+ +LSE + + Sbjct: 1522 DHEITAS-KNNYEGKLNDKDSIIRDLSENIEQ 1552 >SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr 3|||Manual Length = 1316 Score = 29.1 bits (62), Expect = 1.9 Identities = 17/66 (25%), Positives = 32/66 (48%) Query: 448 GSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRRTMESVAAERLNKI 507 G GE+ +L N RR +++ A L + FNA+ +P + + + A R+N + Sbjct: 708 GDSVGELEMLLNNRRSSTLFAIRDSELAKIPETLFNALSLSHPAVGLQLSKIIANRMNLL 767 Query: 508 GKNPNL 513 N ++ Sbjct: 768 LNNKSM 773 >SPCC663.14c |||TRP-like ion channel|Schizosaccharomyces pombe|chr 3|||Manual Length = 687 Score = 28.3 bits (60), Expect = 3.3 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%) Query: 36 TIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQD 95 TI +I ++ +G+ +DN E +I DPK+ + W +LDL L Y++ F Sbjct: 426 TIKVIRVITT--SGLSNEDNPETLISDPKI---YTWWGWLYLDLKERRWL-YVYACFAHY 479 Query: 96 FS 97 FS Sbjct: 480 FS 481 >SPBC1703.03c |||armadillo repeat protein, unknown biological role|Schizosaccharomyces pombe|chr 2|||Manual Length = 664 Score = 27.9 bits (59), Expect = 4.4 Identities = 14/51 (27%), Positives = 25/51 (49%) Query: 288 MLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRE 338 M S++ G + + F+ A ++ L S YR V+QV + Y K ++ Sbjct: 275 MESVVKGISLFDSFIPEALPILSDLLPSEENYRNLVRQVYDKDTYFKTKKD 325 >SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces pombe|chr 1|||Manual Length = 1616 Score = 27.1 bits (57), Expect = 7.7 Identities = 11/31 (35%), Positives = 15/31 (48%) Query: 204 ASVFMRIFNLICMMLLIGHWSGCLQFLVPML 234 A + RIFN C L W+ C Q ++ L Sbjct: 1047 AQILFRIFNSQCSKLGTNAWASCCQLVIMKL 1077 Database: spombe Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.323 0.136 0.407 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,541,724 Number of Sequences: 5004 Number of extensions: 98749 Number of successful extensions: 255 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 249 Number of HSP's gapped (non-prelim): 8 length of query: 620 length of database: 2,362,478 effective HSP length: 77 effective length of query: 543 effective length of database: 1,977,170 effective search space: 1073603310 effective search space used: 1073603310 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (22.0 bits) S2: 57 (27.1 bits)
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