GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001882-TA|BGIBMGA001882-PA|IPR013621|Ion transport
N-terminal, IPR005821|Ion transport, IPR000595|Cyclic
nucleotide-binding, IPR003938|EAG/ELK/ERG potassium channel,
IPR002373|cAMP-dependent protein kinase
         (620 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    25   1.2  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    24   3.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    24   3.6  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   4.7  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   8.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   8.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   8.2  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory
          receptor candidate 34 protein.
          Length = 324

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 9/28 (32%), Positives = 19/28 (67%)

Query: 66 IAKHYLRTWFFLDLISSIPLDYIFLIFN 93
          I + YL+++ ++ L+ S+ +D+I   FN
Sbjct: 43 IDRPYLKSYTYIKLVVSVLMDFIAYFFN 70


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 253 WLEQYSWALFKAMSHML 269
           WL +YSWA    + H+L
Sbjct: 152 WLSRYSWAKVFLVEHIL 168


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)

Query: 253 WLEQYSWALFKAMSHML 269
           WL +YSWA    + H+L
Sbjct: 152 WLSRYSWAKVFLVEHIL 168


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 4/26 (15%)

Query: 323 VKQVEEYMAYRKLPREMRQRITEYFE 348
           V ++ E+  YR LPR    ++T++FE
Sbjct: 182 VPKIAEFFEYRVLPR----KVTDFFE 203


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/24 (33%), Positives = 16/24 (66%)

Query: 196 LIFKFLNMASVFMRIFNLICMMLL 219
           L+ +F+ +   F+ +FN + +MLL
Sbjct: 214 LVLQFITLQHTFIWVFNDVFVMLL 237


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/24 (33%), Positives = 16/24 (66%)

Query: 196 LIFKFLNMASVFMRIFNLICMMLL 219
           L+ +F+ +   F+ +FN + +MLL
Sbjct: 214 LVLQFITLQHTFIWVFNDVFVMLL 237


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 8/24 (33%), Positives = 16/24 (66%)

Query: 196 LIFKFLNMASVFMRIFNLICMMLL 219
           L+ +F+ +   F+ +FN + +MLL
Sbjct: 214 LVLQFITLQHTFIWVFNDVFVMLL 237


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.136    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,011
Number of Sequences: 317
Number of extensions: 5059
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 7
length of query: 620
length of database: 114,650
effective HSP length: 61
effective length of query: 559
effective length of database: 95,313
effective search space: 53279967
effective search space used: 53279967
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 46 (22.6 bits)