Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001882-TA|BGIBMGA001882-PA|IPR013621|Ion transport
N-terminal, IPR005821|Ion transport, IPR000595|Cyclic
nucleotide-binding, IPR003938|EAG/ELK/ERG potassium channel,
IPR002373|cAMP-dependent protein kinase
(620 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59756| Best HMM Match : cNMP_binding (HMM E-Value=5.7e-21) 385 e-107
SB_55650| Best HMM Match : No HMM Matches (HMM E-Value=.) 337 1e-92
SB_43598| Best HMM Match : cNMP_binding (HMM E-Value=4.3e-22) 149 9e-36
SB_29572| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 1e-33
SB_16296| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 7e-22
SB_13245| Best HMM Match : Ion_trans (HMM E-Value=3.3e-25) 91 2e-18
SB_47730| Best HMM Match : Ion_trans (HMM E-Value=1e-14) 91 2e-18
SB_56249| Best HMM Match : cNMP_binding (HMM E-Value=5.4e-23) 86 7e-17
SB_33011| Best HMM Match : cNMP_binding (HMM E-Value=0.037) 81 2e-15
SB_18428| Best HMM Match : cNMP_binding (HMM E-Value=0.037) 81 2e-15
SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.) 78 2e-14
SB_17979| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 5e-13
SB_28522| Best HMM Match : cNMP_binding (HMM E-Value=1.1e-17) 71 2e-12
SB_14152| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 1e-10
SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 1e-10
SB_48433| Best HMM Match : Ion_trans (HMM E-Value=6.1e-26) 65 2e-10
SB_12691| Best HMM Match : cNMP_binding (HMM E-Value=1.7e-26) 60 5e-09
SB_2463| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 2e-08
SB_19865| Best HMM Match : cNMP_binding (HMM E-Value=8.3e-39) 58 3e-08
SB_22086| Best HMM Match : Ion_trans_2 (HMM E-Value=0.00052) 56 8e-08
SB_39188| Best HMM Match : Ion_trans (HMM E-Value=4.9e-20) 54 3e-07
SB_35526| Best HMM Match : PWI (HMM E-Value=5.2) 54 3e-07
SB_28115| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 6e-07
SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 1e-06
SB_41759| Best HMM Match : Ion_trans (HMM E-Value=1.1e-08) 52 1e-06
SB_37987| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 3e-06
SB_24078| Best HMM Match : cNMP_binding (HMM E-Value=1.4e-26) 50 7e-06
SB_13643| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 2e-05
SB_16528| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 3e-04
SB_34521| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 4e-04
SB_52453| Best HMM Match : cNMP_binding (HMM E-Value=1.9e-26) 43 8e-04
SB_5749| Best HMM Match : Gpi1 (HMM E-Value=7.8) 43 8e-04
SB_8690| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_50313| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.008
SB_27554| Best HMM Match : cNMP_binding (HMM E-Value=2.6) 38 0.024
SB_11282| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.055
SB_58276| Best HMM Match : MIB_HERC2 (HMM E-Value=8.3e-33) 31 2.1
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 31 2.1
SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.1
SB_24596| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.8
SB_44231| Best HMM Match : Ion_trans_2 (HMM E-Value=6.5e-09) 31 3.6
SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0) 31 3.6
SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009) 30 4.8
SB_20630| Best HMM Match : rve (HMM E-Value=2.3e-19) 30 4.8
SB_33437| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.4
>SB_59756| Best HMM Match : cNMP_binding (HMM E-Value=5.7e-21)
Length = 858
Score = 385 bits (947), Expect = e-107
Identities = 176/316 (55%), Positives = 239/316 (75%), Gaps = 1/316 (0%)
Query: 199 KFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPPNSWVAINELQEAFWLEQYS 258
+ LN+A +RI LIC ML++ HW+GC+QF VP LQ FP +SWV+ + L+ A EQYS
Sbjct: 436 ELLNIAKGQLRIMKLICCMLVLSHWNGCIQFFVPYLQEFPDDSWVSTSNLKTASPGEQYS 495
Query: 259 WALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQ 318
W+LF+A+SHMLCIGYG +PPQ+LTD+WLT+ SM +GAT YA+F+G ++LI S+DSS R
Sbjct: 496 WSLFRALSHMLCIGYGHYPPQNLTDLWLTVCSMTAGATFYAVFIGIMSSLIMSIDSSGRL 555
Query: 319 YREKVKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEEVILGELSEKLREDVINYNC 378
+ EK+ QVEEYM YRKLP +R ++ +++EHR+ K FDE+ IL ELS+ LRE ++ +N
Sbjct: 556 FNEKLNQVEEYMRYRKLPLRIRLQVQDFYEHRFHHKLFDEDAILTELSKNLRETILVHNI 615
Query: 379 RSLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNKMYFIQEGIVDIVMAN 438
+ L+ +VPFF+ A +F++D+VTKL++EVF GD I + G G+KMYFIQ+GIVDI+
Sbjct: 616 KPLLTTVPFFSGASISFITDIVTKLKFEVFLNGDYICRSGHRGDKMYFIQKGIVDILTRE 675
Query: 439 GEVATSLSDGSYFGEICLLT-NARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRRTME 497
G +ATSL DGS+FGEICLLT ARRVASVRA T C+++SLS HF+ VL YP M+ +E
Sbjct: 676 GALATSLGDGSHFGEICLLTKEARRVASVRAATTCDVYSLSATHFHEVLQDYPEMKSVLE 735
Query: 498 SVAAERLNKIGKNPNL 513
VA ERL+++G P L
Sbjct: 736 EVAKERLSRLGLKPKL 751
Score = 93.5 bits (222), Expect = 5e-19
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 17 SFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFF 76
+F +DDLS W+ N +SD F++DI +NFRTGI+ +N E+VILD K+I+ YLR WF
Sbjct: 316 AFLSDDLSIHWLILNGVSDVFFVVDIFLNFRTGIVDPNNQEEVILDKKVISMMYLRGWFI 375
Query: 77 LDLISSIPLDYIFLIFNQDFSE 98
+DL SS+P DY + I + E
Sbjct: 376 IDLASSLPFDYAYFIASSTTEE 397
>SB_55650| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1172
Score = 337 bits (829), Expect = 1e-92
Identities = 143/254 (56%), Positives = 197/254 (77%), Gaps = 1/254 (0%)
Query: 199 KFLNMASVFMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPPNSWVAINELQEAFWLEQYS 258
+ LN+ +R NL+ ++LLI HW+GCLQFLVP LQ FP SWV+I+ L + W EQY
Sbjct: 500 EILNVTRSVIRFINLVSIILLIAHWNGCLQFLVPYLQDFPETSWVSIHNLMDNDWWEQYC 559
Query: 259 WALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQ 318
W+LFKAMSHMLCIGYGR+PPQ++ ++W+T SM++GAT YA+F+ + N IQ LDS R
Sbjct: 560 WSLFKAMSHMLCIGYGRYPPQNIAEVWVTTFSMLTGATFYAMFIAYCINFIQQLDSPGRN 619
Query: 319 YREKVKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEEVILGELSEKLREDVINYNC 378
YREK++Q+EEYM+YR+LP E+R R+T+Y++HRYQG+ FDEE IL E+S+ LRE +INYNC
Sbjct: 620 YREKIQQIEEYMSYRRLPVELRDRMTKYYDHRYQGRMFDEEKILHEISKPLREQIINYNC 679
Query: 379 RSLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNKMYFIQEGIVDIVMAN 438
R LV SVPFF A+ +FVS ++T+L +EV+ GDII++EG +G +MYF++EG+V + +
Sbjct: 680 RDLVQSVPFFTEAEPDFVSAIITRLSFEVYLEGDIIVREGELGTEMYFLREGVVSVTV-G 738
Query: 439 GEVATSLSDGSYFG 452
G+ A L DG+YFG
Sbjct: 739 GKHANELCDGAYFG 752
Score = 110 bits (265), Expect = 3e-24
Identities = 46/72 (63%), Positives = 61/72 (84%)
Query: 17 SFFNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFF 76
SFF D++S RWIAFN +SDT FL+DI++NFRTG++ + + ILDPK+IAK YL+TWFF
Sbjct: 381 SFFADNVSARWIAFNAVSDTAFLLDILLNFRTGVLVHGSPNKFILDPKIIAKRYLKTWFF 440
Query: 77 LDLISSIPLDYI 88
+DLISS+P+DYI
Sbjct: 441 IDLISSLPIDYI 452
>SB_43598| Best HMM Match : cNMP_binding (HMM E-Value=4.3e-22)
Length = 581
Score = 149 bits (360), Expect = 9e-36
Identities = 85/310 (27%), Positives = 158/310 (50%), Gaps = 9/310 (2%)
Query: 208 MRIFNLICMMLLIGHWSGCLQFLVPMLQGFPPNSWVAINELQEAF--WLEQYSWALFKAM 265
++ F ++ ++LL+ HW+ C F + GF + WV N + QY ++ + +
Sbjct: 273 LQTFAVVLVILLVFHWNACFYFAISESIGFGSDKWVYPNLSSNNYDKLSRQYLYSFYWS- 331
Query: 266 SHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQ 325
+ M+ G PP++ ++ + + G +A +G ++ + +R ++
Sbjct: 332 TRMMITGESENPPETDMELLFVVADLTVGYLTFAALVGQFGAILGHIMRARVEFITHSNS 391
Query: 326 VEEYMAYRKLPREMRQRITEYFEHRYQGK-FFDEEVILGELSEKLREDVINYNCRSLVAS 384
+++YM K+ ++++R+ + ++ + K D E IL +L EKLR + + +++
Sbjct: 392 IKQYMNNHKVNNDLQERVISWIDYMWHKKRSLDHERILEKLPEKLRGQIAVHVYLAVLRQ 451
Query: 385 VPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNKMYFIQEGIVDIVMANG-EVAT 443
VP FA+ + + ++V KLR +VF PGD I ++G +G +MY + G + +V +G V
Sbjct: 452 VPVFADCEPGLLREIVVKLRSQVFSPGDYICRKGDVGREMYIVNSGCLQVVGDDGTTVLA 511
Query: 444 SLSDGSYFGEICLLT----NARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRRTMESV 499
LS+GSYFGEI +L RR A+VR+ + +L LS D + YP R +E
Sbjct: 512 ILSEGSYFGEISILNLSGIGNRRTAAVRSVGFSDLLCLSKDDLLEAMSDYPEARMRLEER 571
Query: 500 AAERLNKIGK 509
E LN+ K
Sbjct: 572 GRELLNRTHK 581
Score = 43.6 bits (98), Expect = 5e-04
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 25 TRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRT-WFFLDLISSI 83
T W + + D I+ +DI+V FRT + Q ++ D K + ++YL T F LD+IS +
Sbjct: 173 TLWFVMDYICDIIYGMDIMVEFRTAYLDQG---LLVRDLKKLRQNYLATVKFKLDMISIL 229
Query: 84 PLDYIF 89
P D+++
Sbjct: 230 PFDFLY 235
>SB_29572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 617
Score = 142 bits (343), Expect = 1e-33
Identities = 75/236 (31%), Positives = 142/236 (60%), Gaps = 8/236 (3%)
Query: 289 LSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPREMRQRITEYFE 348
L + G +A +G+ N+I +L+++R ++ K+ ++ YM + K+P+ +++R+ ++F+
Sbjct: 281 LDDLIGVLLFATIVGNVGNIITNLNATRLDFQNKMDGIKAYMRFHKIPQHLQRRVIKWFD 340
Query: 349 HRYQGKFF-DEEVILGELSEKLREDV-INYNCRSLVASVPFFANADSNFVSDVVTKLRYE 406
+ + K DEE IL L +KLR ++ IN + SL V F + ++ F+ ++V +LR +
Sbjct: 341 YLWTYKKHPDEEEILLSLPDKLRAEIAINVHLDSL-RKVAIFQDCEAGFLCELVLRLRSQ 399
Query: 407 VFQPGDIIIKEGTIGNKMYFIQEGIVDIVMANG-EVATSLSDGSYFGEICLLTNA----R 461
+F PGD + ++G +G +MY + G +++V +G ++ L GSYFGEI +L+ + R
Sbjct: 400 LFSPGDYVCRKGEVGREMYIVNRGKLEVVSEHGTKIYAVLEAGSYFGEISVLSMSSAGNR 459
Query: 462 RVASVRAETYCNLFSLSVDHFNAVLDQYPLMRRTMESVAAERLNKIGKNPNLVAHR 517
R ASVR+ Y LF L+ + VLD+YP ++ +E +A E+L + ++ +R
Sbjct: 460 RTASVRSVGYTELFCLAKNDLMEVLDEYPNIKEKIEKIAKEKLENDKRRTSMSLNR 515
>SB_16296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 102 bits (245), Expect = 7e-22
Identities = 58/191 (30%), Positives = 107/191 (56%), Gaps = 7/191 (3%)
Query: 322 KVKQVEEYMAYRKLPREMRQRITEYFEHRYQGKF-FDEEVILGELSEKLREDV-INYNCR 379
K+ ++EY+ +LP +++R+ +F++ ++ K +E+ + +L++ + ++ I+ N
Sbjct: 458 KLNGMKEYIEAYQLPAHLKKRVIHWFDYLWRHKRDMNEQELFHKLNDNFKAEIAIHVNLD 517
Query: 380 SLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNKMYFIQEGIVDIVMANG 439
+L+ V F + D F+ ++V KLR + PGD I ++G G +MY + +G ++++
Sbjct: 518 TLIR-VEMFHDCDPGFLHELVLKLRPVICSPGDFICRQGEKGREMYIVNKGSLEVLDEKE 576
Query: 440 EVATSLSDGSYFGEICLLT----NARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRRT 495
V +LS GS+FGEI LL R ASVR+ + +LF LS VL+ YP +
Sbjct: 577 TVLATLSAGSHFGEISLLNMKGIGNLRTASVRSVGFSDLFQLSKTDLEEVLEFYPQAKEQ 636
Query: 496 MESVAAERLNK 506
ME +A + K
Sbjct: 637 MERIATQTYEK 647
Score = 39.9 bits (89), Expect = 0.006
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 28 IAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDY 87
IA + D+IF +D +V FR G ++ + V+ KL K+ F LDLIS +P D
Sbjct: 317 IAVDYTFDSIFFLDTLVQFRVGFLE--HGVMVVGCWKLTKKYGCSFGFMLDLISILPFDV 374
Query: 88 IFL 90
++L
Sbjct: 375 LYL 377
Score = 31.1 bits (67), Expect = 2.8
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 209 RIFNL---ICMMLLIGHWSGCLQFLVPMLQGFPPNSWV 243
++FNL I + LI HW C+ F++ +GF + W+
Sbjct: 411 KLFNLAKLIHYLFLIIHWVACVYFILSRYEGFGTDEWL 448
>SB_13245| Best HMM Match : Ion_trans (HMM E-Value=3.3e-25)
Length = 816
Score = 91.1 bits (216), Expect = 2e-18
Identities = 70/309 (22%), Positives = 144/309 (46%), Gaps = 26/309 (8%)
Query: 210 IFNLICMMLLIGHWSGCLQFLVPML-QGFPPNSWVAI--NELQEAF-----WL-----EQ 256
+F ++ +L+ HW C+ +++ Q SW++I E + F W +
Sbjct: 289 LFLMLMFFMLVAHWMACIWYMIGFSEQKHKQTSWLSILATESNKHFHPTDPWSGPYLPSR 348
Query: 257 YSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSR 316
Y +L+ M+ +G+G + + T+ M+ GA YA G+ T +I SS
Sbjct: 349 YLTSLYYVMTLCTTVGFGNVSANTDGERIFTICGMLLGAVMYAGIFGNVTAIIHGQYSSN 408
Query: 317 RQYREKVKQVEEYMAYRKLPREMRQRITEYFEHRY-QGKFFDEEVILGELSEKLREDVIN 375
+YR++ + E++ + K+ + +R+ EY H + Q K D +L + E L+ ++
Sbjct: 409 FRYRKESMAINEFVRFYKIRNPLARRLREYSRHTWSQTKGTDMNRVLKKFPEGLQYEIRL 468
Query: 376 YNCRSLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNKMYFIQEGIVDIV 435
+ +++++ F +++S+ + + ++R + PG I+ EG + ++ I+ G ++I+
Sbjct: 469 HMHLTVLSNSFLFMDSESSCLRGISMRMRRQYHLPGHFIMYEGDEVDTLHLIKRGKIEII 528
Query: 436 MANGEVATSLS---------DGSYFGEICLLTNAR--RVASVRAETYCNLFSLSVDHFNA 484
+ NG L+ DG +G R VAS+RA T + + ++ +
Sbjct: 529 V-NGVCRGRLAMLNMFILAVDGDAYGTSLRQAGRRPKSVASLRAATCVDCHVIKIEELDD 587
Query: 485 VLDQYPLMR 493
V+ YP R
Sbjct: 588 VMQSYPSSR 596
Score = 50.4 bits (115), Expect = 4e-06
Identities = 25/61 (40%), Positives = 41/61 (67%), Gaps = 3/61 (4%)
Query: 35 DTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQ 94
D IF++DIV+NFRT +++ E +I +P I HYLR++F +D +++IP + + L N
Sbjct: 197 DVIFMLDIVLNFRTTYVKE--GEVLITNPCKIGIHYLRSYFIVDFVAAIPWE-LLLDLNA 253
Query: 95 D 95
D
Sbjct: 254 D 254
>SB_47730| Best HMM Match : Ion_trans (HMM E-Value=1e-14)
Length = 904
Score = 91.1 bits (216), Expect = 2e-18
Identities = 51/241 (21%), Positives = 121/241 (50%), Gaps = 8/241 (3%)
Query: 207 FMRIFNLICMMLLIGHWSGCLQFLVPMLQGFPPNSWVAINELQEAFWLEQYSWALFKAMS 266
F+R+F L+ +M L+ +W+ ++ +GF N+WV +QY +L+ +
Sbjct: 304 FLRVFFLLHLMFLLINWNAGFYIMISRTEGFGTNAWVYPGN---GSLYQQYLKSLYWSTL 360
Query: 267 HMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQV 326
+ IG P + ++ T+ + G +A +G+A ++I + +++R + + +
Sbjct: 361 TLTAIGDLPSPATNFEYLY-TIACYLCGVFMFATIVGNAGSIIVNRNANRLDFERQREGT 419
Query: 327 EEYMAYRKLPREMRQRITEYFEHRY-QGKFFDEEVILGELS---EKLREDVINYNCRSLV 382
YM ++P+++++R+ ++++ + +G+ L L+ +KL+ ++ + +
Sbjct: 420 NNYMRKNRVPKDLQRRVLMWYDYSWARGRIGSGGGDLNSLTLLPDKLKTEIALHVNLETL 479
Query: 383 ASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNKMYFIQEGIVDIVMANGEVA 442
V F F+ D+V ++ +F PGD I ++G + +MY I +G +++V ++
Sbjct: 480 RKVTFLQKCQPEFLHDLVLMMKLRIFTPGDFICRKGEVAREMYVIIDGKIEVVGRTADIR 539
Query: 443 T 443
T
Sbjct: 540 T 540
Score = 54.4 bits (125), Expect = 3e-07
Identities = 22/73 (30%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 21 DDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHY-LRTWFFLDL 79
D+ + W+ F+ D ++++DI++NFRTG +++ +++D K +A+HY + F DL
Sbjct: 201 DEFTVAWLVFDYFCDFLYVLDIIINFRTGFLEEG---ILVVDAKRVARHYAVSKNFIADL 257
Query: 80 ISSIPLDYIFLIF 92
+S P D + +++
Sbjct: 258 LSVFPTDILCVLY 270
>SB_56249| Best HMM Match : cNMP_binding (HMM E-Value=5.4e-23)
Length = 279
Score = 86.2 bits (204), Expect = 7e-17
Identities = 41/110 (37%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 385 VPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNKMYFIQEGIVDIVMANGEVATS 444
VP F +D NF+ + VF+PGD I+ G +G +MY I+ G V+I+ + + T
Sbjct: 124 VPIFVESDENFMRTLSLHTTSYVFKPGDYIVYAGDMGREMYCIRRGQVNILCEDNVIGT- 182
Query: 445 LSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRR 494
L GS+FGEI L+ R A+V+A+TYC + L+ + VL+++P+++R
Sbjct: 183 LGPGSFFGEIGLIYGESRFATVQAKTYCQILMLTKHDLDEVLEEFPIIKR 232
>SB_33011| Best HMM Match : cNMP_binding (HMM E-Value=0.037)
Length = 210
Score = 81.4 bits (192), Expect = 2e-15
Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 27/198 (13%)
Query: 287 TMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPREMRQRITE- 345
T + G +A +G+ ++I +++++R ++ K+ ++ YM + K+P +++ R
Sbjct: 5 TSAMFLFGIFVFAAVVGNVGDVISNMNAARTDFQTKMDYIKSYMEHHKVPEDLQNRAKRW 64
Query: 346 --YFEHRYQGKFF-------------------DEEVILGELSEKLREDVINYNCRSLVAS 384
Y R+ + + DE LG L +LR ++ + + +
Sbjct: 65 AYYAWSRHVARTYCLPVNLLKLAMIVFRTHALDESDALGMLPLRLRAELAIHVHLATLKK 124
Query: 385 VPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNKMYFIQEGIVDIVM---ANGE- 440
V F + D + ++V KLR ++F PGD I + G IG +MY I G V++V+ GE
Sbjct: 125 VKIFKDCDEGLLCELVLKLRPQIFSPGDYICRCGEIGREMYIINHGKVEVVVPDSTTGEK 184
Query: 441 -VATSLSDGSYFGEICLL 457
V SL++G+YFGEI LL
Sbjct: 185 IVVASLTEGNYFGEISLL 202
>SB_18428| Best HMM Match : cNMP_binding (HMM E-Value=0.037)
Length = 210
Score = 81.4 bits (192), Expect = 2e-15
Identities = 55/198 (27%), Positives = 99/198 (50%), Gaps = 27/198 (13%)
Query: 287 TMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPREMRQRITE- 345
T + G +A +G+ ++I +++++R ++ K+ ++ YM + K+P +++ R
Sbjct: 5 TSAMFLFGIFVFAAVVGNVGDVISNMNAARTDFQTKMDYIKSYMEHHKVPEDLQNRAKRW 64
Query: 346 --YFEHRYQGKFF-------------------DEEVILGELSEKLREDVINYNCRSLVAS 384
Y R+ + + DE LG L +LR ++ + + +
Sbjct: 65 AYYAWSRHVARTYCLPVNLLKLAMIVFRTHALDESDALGMLPLRLRAELAIHVHLATLKK 124
Query: 385 VPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNKMYFIQEGIVDIVM---ANGE- 440
V F + D + ++V KLR ++F PGD I + G IG +MY I G V++V+ GE
Sbjct: 125 VKIFKDCDEGLLCELVLKLRPQIFSPGDYICRCGEIGREMYIINHGKVEVVVPDSTTGEK 184
Query: 441 -VATSLSDGSYFGEICLL 457
V SL++G+YFGEI LL
Sbjct: 185 IVVASLTEGNYFGEISLL 202
>SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 77.8 bits (183), Expect = 2e-14
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 210 IFNLICMMLLIGHWSGCLQFLVPMLQGFPPNSW----------VAINELQEAFWLE-QYS 258
I L C LL+ HW C+ + Q NSW V+ + L+ +Y
Sbjct: 265 IILLTCFFLLVAHWLACIWHAIGQAQLGDHNSWIEKLSRHSQHVSSGNVTHTPGLQTRYI 324
Query: 259 WALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQ 318
AL+ M+ + +G+G P + + ++L MI GA YA G+ T +IQ L S +
Sbjct: 325 TALYFTMTSLSSVGFGNVSPNTNAEKVFSILVMIVGALMYASIFGNMTAIIQRLYSRTSR 384
Query: 319 YREKVKQVEEYMAYRKLPREMRQRITEYFEHRY 351
+R ++ +++++ + K+PR +R + EYF H +
Sbjct: 385 HRRNLRIIQDFVRFYKIPRNLRDDLEEYFRHEW 417
Score = 56.0 bits (129), Expect = 8e-08
Identities = 21/58 (36%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 31 NCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDYI 88
N D +F++DI +NFR+ +++ +++I++PK IA +Y ++WF +DL+S+IP +++
Sbjct: 49 NLCVDLLFVVDIPINFRSTYVRE-GTDELIVNPKKIALNYFKSWFLIDLLSAIPFEFM 105
>SB_17979| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 73.3 bits (172), Expect = 5e-13
Identities = 59/271 (21%), Positives = 122/271 (45%), Gaps = 18/271 (6%)
Query: 242 WVAINELQEAFWLEQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALF 301
W+ + L+ L Y AL+ ++ + GYG + +M M+ G +
Sbjct: 42 WLDDHGLRGEAGLTIYVSALYWVVASVTTTGYGDIHADNNNEMIYASFVMVGGKLLFGFI 101
Query: 302 LGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPREMRQRITEYFEH--------RYQG 353
LG+ + + +L+ + YR+K++ V+ ++ P E+++R+ ++E ++
Sbjct: 102 LGNIASTLSNLEMKQFGYRKKLEVVKHHLKKEMAPVELQERVINFYEFIWFKNKGAKFSS 161
Query: 354 KFFD-EEVILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLRYEVFQPGD 412
F+D + GEL+ +L DV+ VP + A F+ + K + + G+
Sbjct: 162 LFYDIPHCLGGELAMELVGDVLK--------KVPVLSGASDPFIRLLSAKAQPCQIRAGE 213
Query: 413 IIIKEGTIGNKMYFIQEGIVDIVMA-NGEVATSLSDGSYFGEICLLTNARRVASVRAETY 471
II++G IG ++ ++ G IV + + E + S++ + LL + SVRA T
Sbjct: 214 YIIRKGDIGQQLIILKRGTAAIVKSEDPEKLEEMVVNSFYSQRYLLLTGPYLESVRAITN 273
Query: 472 CNLFSLSVDHFNAVLDQYPLMRRTMESVAAE 502
++F L VL + ++ ++ A+
Sbjct: 274 VDVFLLDKKDLYEVLKFDQVTKQRVQQAVAD 304
>SB_28522| Best HMM Match : cNMP_binding (HMM E-Value=1.1e-17)
Length = 380
Score = 71.3 bits (167), Expect = 2e-12
Identities = 40/118 (33%), Positives = 64/118 (54%), Gaps = 5/118 (4%)
Query: 406 EVFQPGDIIIKEGTIGNKMYFIQEGIVDIVMANGEVATSLSDGSYFGEICLLTNARRVAS 465
E F+ D I+ G +G +MY I+ G V+I+ EV +L GS+FGEI L+ RV +
Sbjct: 103 ERFRNRDYIVYAGDMGREMYCIRRGQVNILNDEDEVVGTLGPGSFFGEIGLVCGESRVYT 162
Query: 466 VRAETYCNLFSLSVDHFNAVLDQYPLMRRTMES-----VAAERLNKIGKNPNLVAHRE 518
V+ +TYC L+ + VL +PL+RR + V ++ L + P+ + HR+
Sbjct: 163 VQCKTYCQTLMLTKHDMDKVLGDFPLLRREINESGDRHVGSKILEQSKPTPSKLTHRQ 220
>SB_14152| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 594
Score = 65.3 bits (152), Expect = 1e-10
Identities = 34/153 (22%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 213 LICMMLLIGHWSGCLQFLVPMLQGFPPNSWVAI-----------NELQEAFWLE---QYS 258
L C+ +L+ HW C+ + + N W+ + N W +Y
Sbjct: 244 LTCLFMLLAHWLACIWHAIGHHEIHNTNGWIWLLAMEGKNALKYNASDHTTWPNVNSRYV 303
Query: 259 WALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQ 318
+L+ ++ + +G+G P + + ++ M+ GA YA G+ T +IQ L S +
Sbjct: 304 TSLYFTLTSLTTVGFGNVSPNTNAEKAFSVCVMLVGALFYAAIFGNMTAIIQRLYSRTSR 363
Query: 319 YREKVKQVEEYMAYRKLPREMRQRITEYFEHRY 351
+ ++ +EE+ + K+P +R + E+F H +
Sbjct: 364 FHRDLRVIEEFSKFNKVPPSLRDDLEEFFRHEW 396
Score = 58.4 bits (135), Expect = 2e-08
Identities = 23/58 (39%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 31 NCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDYI 88
N D +F++DI +NFR+ + QD+ +++I +PK I HYL+TWF +D ++IP +++
Sbjct: 144 NLWVDLMFIVDIFINFRSTYVAQDS-DEIISNPKNIGLHYLKTWFVVDFFAAIPFEFM 200
>SB_20225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1548
Score = 65.3 bits (152), Expect = 1e-10
Identities = 38/187 (20%), Positives = 85/187 (45%), Gaps = 2/187 (1%)
Query: 257 YSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSR 316
Y AL+ ++ M +G+G + + ++ M+ GA +A G+ +IQ L ++R
Sbjct: 321 YVTALYFILTSMTTVGFGNVSANTRAEKAFAVVVMLIGALMHAAIFGNVAAIIQKLYANR 380
Query: 317 RQYREKVKQVEEYMAYRKLPREMRQRITEYFEHRYQ-GKFFDEEVILGELSEKLREDVIN 375
+Y + ++++++ + ++ R+ + F + D IL +L+ DV
Sbjct: 381 VRYHSRSNEIKQFIRVHHIEADLANRLEDCFHTTWSLSGGVDTREILTTFPYELQADVCM 440
Query: 376 YNCRSLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNKMYFIQEGIVDIV 435
+ R L+ +P F+ A V K+ PG+ ++ + + N +Y+I G ++++
Sbjct: 441 HLYRGLL-DLPVFSQAPRGLFRMVSLKVSPVYIGPGEYLLTQNDVINSIYYIASGSMEVL 499
Query: 436 MANGEVA 442
A
Sbjct: 500 QGESVAA 506
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/79 (32%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 28 IAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDY 87
I + + + F++DIVV+FRT + + A +++ + K IA HYL+ WF LD ++++P +
Sbjct: 162 IIVDMVIELFFILDIVVHFRTTFVNK--AGRIVYEQKAIAIHYLKGWFILDFLAALPFEA 219
Query: 88 IFLIFNQDFSENFQILHAG 106
++ I N+ + Q+L G
Sbjct: 220 LYFI-NKSWGFLVQLLKCG 237
>SB_48433| Best HMM Match : Ion_trans (HMM E-Value=6.1e-26)
Length = 1344
Score = 64.9 bits (151), Expect = 2e-10
Identities = 37/152 (24%), Positives = 74/152 (48%), Gaps = 15/152 (9%)
Query: 213 LICMMLLIGHWSGCLQFLVPMLQGFPPNS---WVAI-----------NELQEAFWLE-QY 257
L+C L+ HW C+ + + L+ NS W+ + E+ +E +Y
Sbjct: 561 LMCSFALLAHWLACIWYAIGNLERQRTNSTHGWLDVLAEQIHRPFDEKEVDSGPDIESKY 620
Query: 258 SWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSSRR 317
AL+ +S + +G+G P + + ++ M+ G+ YA G+ +I L S+
Sbjct: 621 ITALYFTLSSLTSVGFGNVSPNTNAEKIFSICVMLIGSLFYAAIFGNVAAIIARLYSNTA 680
Query: 318 QYREKVKQVEEYMAYRKLPREMRQRITEYFEH 349
+Y ++++V E++ + ++P +RQRI +Y H
Sbjct: 681 RYHAQMQRVREFIRFHQIPNPLRQRIEDYSHH 712
Score = 61.3 bits (142), Expect = 2e-09
Identities = 25/68 (36%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 28 IAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDY 87
+ + L D +F++DI +NFRT + D+ ++V+ P IA HY +TWF +DL+++IP +
Sbjct: 458 VILDYLVDVMFIVDIFINFRTTFV--DSNDEVVSHPCRIAVHYFKTWFVIDLMAAIPFEL 515
Query: 88 IFLIFNQD 95
+ ++ N D
Sbjct: 516 LIMVGNTD 523
Score = 59.3 bits (137), Expect = 9e-09
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 357 DEEVILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIK 416
D + +LG E L+ D+ + +++ + F +A + + KLR PGD II
Sbjct: 951 DMDQVLGGFPECLQADICLHLNANVLTTYRAFTSASQGCLRSLALKLRTTHLPPGDFIIY 1010
Query: 417 EGTIGNKMYFIQEGIVDIVMANGEVATSLSDGSYFGEICLLTNAR----RVASVRAETYC 472
+G + +YF+ G V+ V+ + + L G FGE L+ R S+RA TYC
Sbjct: 1011 QGDEISHLYFLVRGTVE-VLKDDTIMAILGKGDSFGENFGLSPNRPPGNSHVSIRALTYC 1069
Query: 473 NLFSLSVDHFNAVLDQYPLMRRT 495
+L ++S D + YP ++T
Sbjct: 1070 DLRAISRDDLVNTMRMYPNFQQT 1092
>SB_12691| Best HMM Match : cNMP_binding (HMM E-Value=1.7e-26)
Length = 376
Score = 60.1 bits (139), Expect = 5e-09
Identities = 34/107 (31%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 387 FFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNKMYFIQEGIVDIVMANGEVATSLS 446
F N +++ V +VV + +F+ + IIKE G+ +Y ++EG + G V +
Sbjct: 153 FLKNLEASQVREVVECMCERMFKRDEYIIKEKEPGSHLYVLEEGKCQVTK-EGTVLGHMG 211
Query: 447 DGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMR 493
G FGE+ +L N R ASVRA+T L+++ F ++ + LMR
Sbjct: 212 PGKAFGELAILYNCTRTASVRAQTSGKLWAIDRQTFQTIMMKTGLMR 258
>SB_2463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 35 DTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLI 91
D +F+ DIV+NF T + +D ++I DP+LI +YL+TWF LDL+SS+P ++ I
Sbjct: 107 DWLFIADIVLNFHTTYVGKDG--EIIDDPRLIRLNYLKTWFVLDLVSSLPYGVLYFI 161
Score = 48.8 bits (111), Expect = 1e-05
Identities = 20/92 (21%), Positives = 45/92 (48%)
Query: 256 QYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSS 315
+Y AL+ ++ + IG+G P + + ++M+ G+ ++L G + ++Q +
Sbjct: 270 RYVSALYYTLTSLTTIGFGNISPNTTAEKLFGCVTMLLGSILFSLIFGQVSAILQQSQKN 329
Query: 316 RRQYREKVKQVEEYMAYRKLPREMRQRITEYF 347
+Y + + ++ KLP + RI +YF
Sbjct: 330 TAKYHSIIDNMRQFSKLYKLPSVLADRIIDYF 361
Score = 40.7 bits (91), Expect = 0.003
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Query: 410 PGDIIIKEGTIGNKMYFIQEGIVDIVMANGEVATSLSDGSYFGE-ICLL-TNARRVASVR 467
P D II G + +YFI G +++ V L +G FG+ +C T + V
Sbjct: 586 PNDRIIHHGESLDVLYFIARGSLEVKQGEAVVGL-LGEGDVFGDNVCNEPTVGQSAVDVH 644
Query: 468 AETYCNLFSLSVDHFNAVLDQYP 490
A TYC+L + D VL+ YP
Sbjct: 645 ALTYCDLHCIQRDALLEVLEFYP 667
>SB_19865| Best HMM Match : cNMP_binding (HMM E-Value=8.3e-39)
Length = 373
Score = 57.6 bits (133), Expect = 3e-08
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 381 LVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNK-MYFIQEGIVDIVMANG 439
L+ SV + + V L + F+ G+ +I+EG MYFI++G V + + +G
Sbjct: 241 LLKSVSILKELKPDELDKVSDALYPKEFKDGEAVIREGNESAYCMYFIEKGKVRVTVKDG 300
Query: 440 EVATSLS-DGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMRRTMES 498
EV ++ D +YFGE+ L+ N R ASV A C SL D F ++ + +
Sbjct: 301 EVEKTVEFDKNYFGELALVMNQPRSASVYAVGECKFASLKKDDFERLMGPCKEIMKRNAK 360
Query: 499 VAAERLNKIG 508
E+ K+G
Sbjct: 361 EYEEQKKKLG 370
>SB_22086| Best HMM Match : Ion_trans_2 (HMM E-Value=0.00052)
Length = 458
Score = 56.0 bits (129), Expect = 8e-08
Identities = 28/170 (16%), Positives = 77/170 (45%), Gaps = 1/170 (0%)
Query: 255 EQYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDS 314
++Y + + A + +GYG +++M + ++ G Y + + + D+
Sbjct: 289 KRYLISFYWAAATCASVGYGDIRSYQVSEMTYSFFFIVIGIVFYGYIVASVAAGLANADA 348
Query: 315 SRRQYREKVKQVEEYMAYRKLPREMRQRITEYFEHRY-QGKFFDEEVILGELSEKLREDV 373
R +++E++ +++++ + ++ +I ++E+ + + + D + L D+
Sbjct: 349 QRARFQERLDSIKDFLQEENINEHVKSKIINHYEYTWLRNRGVDSSTLFEGTPLSLHADI 408
Query: 374 INYNCRSLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNK 423
+ + VP F N D FV + ++ F + I+++G IG++
Sbjct: 409 TISLYKDAIEKVPLFQNKDIGFVKMLSLHVKPIYFLSNEYIVQKGEIGHE 458
>SB_39188| Best HMM Match : Ion_trans (HMM E-Value=4.9e-20)
Length = 551
Score = 54.4 bits (125), Expect = 3e-07
Identities = 66/273 (24%), Positives = 110/273 (40%), Gaps = 45/273 (16%)
Query: 256 QYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISG-ATCYALFLGHATNLIQSLDS 314
+Y AL+ A + G+G + ++ W ++L M+ G A + L LG ++I +LD+
Sbjct: 217 RYMTALYWATATASSTGFGDIHAVTDSEKWYSILCMLIGIAYFFGLLLGSMASIITNLDA 276
Query: 315 SRRQYREKVKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEEVILG-ELSEKLREDV 373
R Y + ++++M TE QG F D V L EL+ + V
Sbjct: 277 MRASYNHHLTAIKQHMWLT----------TEGVNT--QGIFKDLPVTLQTELALSINNKV 324
Query: 374 INYNCRSLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNKMYFIQEGIVD 433
+ F + + + T ++ F P +II +G +G+ MY+I G V
Sbjct: 325 LE--------KAEVFKDLSAGSKRMLTTYIKPVFFMPDQVIINKGDVGSAMYYIHRGKV- 375
Query: 434 IVMANGEVATSLSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNAVLDQYPLMR 493
E+ L+ N R VRA T C + L N VL+ YP
Sbjct: 376 -------------------EVTLVYNILRTTVVRAITPCVICVLERQDMNKVLNYYPKAL 416
Query: 494 RTMESVAAERLNKIGKNPNLVAHREDDTTSEGN 526
+ + ++ +R + N V + TT E N
Sbjct: 417 QKLHNIVEDRCEIVQSKGNSVL---EMTTDEAN 446
Score = 41.1 bits (92), Expect = 0.003
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 33 LSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIF 92
L D F +DIV F ++ + +I D I ++Y++ F LDL+S +P D I L
Sbjct: 61 LLDASFFLDIVSKFHLAFFEKAS---IITDKARIRRNYIKGRFLLDLLSVLPFDLIALWL 117
Query: 93 NQDFSENFQIL 103
D E Q+L
Sbjct: 118 TVDKMEPSQVL 128
>SB_35526| Best HMM Match : PWI (HMM E-Value=5.2)
Length = 159
Score = 54.4 bits (125), Expect = 3e-07
Identities = 20/56 (35%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 31 NCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLD 86
N + D +F++DI++NFR+ +Q ++++L+P+ IA +YL++WF +D +++IP +
Sbjct: 81 NLIVDLMFVVDILINFRSTYTRQ-GTDELVLNPRKIACNYLKSWFVIDFLAAIPFE 135
>SB_28115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 53.2 bits (122), Expect = 6e-07
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 387 FFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNKMYFIQEGIVDIVMANGEVATSLS 446
F N ++ V +V + FQ D+II+EG GN +Y I +G + + N +V +
Sbjct: 486 FLKNLEAAQVRKIVDCMYSNTFQRNDVIIQEGDAGNALYAIADGRLQVTREN-KVLGEMV 544
Query: 447 DGSYFGEICLLTNARRVASV 466
G FGE+ +L N RR A+V
Sbjct: 545 AGMVFGELAILYNCRRTATV 564
>SB_3342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 52.4 bits (120), Expect = 1e-06
Identities = 26/141 (18%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Query: 284 MWLTMLSMISGATCYALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPREMRQRI 343
M + + MI G Y + + + D+ R +++E++ + ++ K+P+++ +RI
Sbjct: 1 MAYSFVFMIFGIVFYGYIVASVAAGLANADAQRARFQERLTTIGHFLDEEKVPKDVAERI 60
Query: 344 TEYFEHRYQ-GKFFDEEVILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTK 402
T ++ + ++ + DE + + + D+ + ++ VP F + F+ +
Sbjct: 61 TRHYAYMWERNRGVDESSLFQGIPLAMHADITSSLYHEVIEKVPLFKGKEHGFLKLLSMY 120
Query: 403 LRYEVFQPGDIIIKEGTIGNK 423
+R F + I+++G IG++
Sbjct: 121 MRPIYFLAKEYIVRQGEIGHE 141
>SB_41759| Best HMM Match : Ion_trans (HMM E-Value=1.1e-08)
Length = 276
Score = 52.0 bits (119), Expect = 1e-06
Identities = 19/56 (33%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 31 NCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLD 86
N + D +F++DI++NFR+ +Q ++++ +P+ IA +YL++WF +D +++IP +
Sbjct: 81 NLIVDLMFVVDILINFRSTYTRQ-GTDELVSNPRKIACNYLKSWFVIDFLAAIPFE 135
>SB_37987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1295
Score = 50.8 bits (116), Expect = 3e-06
Identities = 27/116 (23%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 241 SWVAINELQEAFWLE----QYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGAT 296
SW+++ ++ E LE +Y AL+ A + GYG + + W ++L+M+ G +
Sbjct: 521 SWMSLQKV-EGLALETIGSKYMTALYWATATATSTGYGDVYATNDKEKWFSVLAMLLGIS 579
Query: 297 CY-ALFLGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPREMRQRITEYFEHRY 351
+ L LG +++ ++D R Y + + ++ YM + ++++R+ Y+E+ +
Sbjct: 580 MFFGLMLGGMASIVNNMDKMRAHYIQHLAAIKAYMDDANITEDVQERVLTYYEYMW 635
Score = 37.5 bits (83), Expect = 0.032
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 19 FNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLD 78
F+ + T ++A + D IFL D+V F ++ ++I D +LI + YLR F
Sbjct: 370 FDSSVQT-FMALGYMLDLIFLSDMVSRFYLAYYEK---AKLITDRRLIRQEYLRGPFVWH 425
Query: 79 LISSIPLDYIFLIFNQD 95
L+S +PLD + L +
Sbjct: 426 LLSILPLDVLVLALQSE 442
>SB_24078| Best HMM Match : cNMP_binding (HMM E-Value=1.4e-26)
Length = 692
Score = 49.6 bits (113), Expect = 7e-06
Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 381 LVASVPFFANADSNFVSDVVTKLRYEV---FQPGDIIIKEGTIGNKMYFIQEGIVDIVMA 437
++ VP + + D++ ++ E+ + G + +EG G++MY + G V +
Sbjct: 369 VLREVPVLHGWEEAAIKDLIKAMKQEIIVLYPCGSAVYREGDPGHEMYVLVHGRVGLFAE 428
Query: 438 NGEVATSLSD---GSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNAVLDQYP 490
++A S G FGE T+ + +++A T C + +L HF +L+QYP
Sbjct: 429 GHQLAVFDSGDKRGFTFGEEGFFTDKEKRCTIKALTPCQIITLKKHHFYDILNQYP 484
>SB_13643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 48.0 bits (109), Expect = 2e-05
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 19 FNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLD 78
F+ +++ W A L D +FL+DIV F ++ + +I D I ++Y++ F LD
Sbjct: 60 FDSNITFLW-AVVYLLDALFLLDIVSKFHLAFFEKAS---IITDKARIRRNYIKGRFLLD 115
Query: 79 LISSIPLDYIFLIFNQDFSENFQIL 103
L+S +PLD I L D E Q+L
Sbjct: 116 LLSVLPLDLIALWLTVDKMEPSQVL 140
>SB_16528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 44.4 bits (100), Expect = 3e-04
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 360 VILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGT 419
V+L E L+ D+ + + L A F A + + + PG +IK+G
Sbjct: 35 VVLKRFPESLQADICVHLHKKLFAECSAFQCASEGCLRALARRFDIRRHLPGQYLIKQGD 94
Query: 420 IGNKMYFIQEGIVDIVMANGEVATSLSDGSY----FGEICLLTNARRVASVRAETYCNLF 475
K+YFI +G V+ V+ +G L G + L A+ AS+ +TYC +
Sbjct: 95 EVKKLYFIAKGFVE-VLKDGHCELVLGKGDVISCDYTSRQSLRTAKANASLLIQTYCQIH 153
Query: 476 SLSVDHFNAVLDQYPLMRRT 495
+ +VL Y R +
Sbjct: 154 VVDWQDLLSVLRVYSKFRES 173
>SB_34521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 62
Score = 44.0 bits (99), Expect = 4e-04
Identities = 22/57 (38%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Query: 39 LIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLDLISSIPLDYIFLIFNQD 95
++DIV+NFRT +++ E +I +P I HYLR++F +D +++IP + + L N D
Sbjct: 1 MLDIVLNFRTTYVKE--GEVLITNPCKIGIHYLRSYFIVDFVAAIPWE-LLLDLNAD 54
>SB_52453| Best HMM Match : cNMP_binding (HMM E-Value=1.9e-26)
Length = 370
Score = 42.7 bits (96), Expect = 8e-04
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 408 FQPGDIIIKEGTIGNKMYFIQEGIVDIVM---ANGEV--ATSLSDGSYFGEICLLTNARR 462
FQ GD ++ +G G++ + I EG ++ AN + + L YFGEI L+ N R
Sbjct: 265 FQDGDDVVVQGEHGDEFFIIVEGTAVVLQRRSANEDFIEVSRLGPSDYFGEIALVLNRPR 324
Query: 463 VASVRAETYCNLFSLSVDHFNAVL 486
A+V+A L F VL
Sbjct: 325 AATVQARGTLKCVKLDRQRFERVL 348
>SB_5749| Best HMM Match : Gpi1 (HMM E-Value=7.8)
Length = 226
Score = 42.7 bits (96), Expect = 8e-04
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 19 FNDDLSTRWIAFNCLSDTIFLIDIVVNFRTGIMQQDNAEQVILDPKLIAKHYLRTWFFLD 78
F+ ++ W A L D F +DIV F ++ + +I D I ++Y++ F LD
Sbjct: 68 FDSSITFLW-AVVYLLDASFFLDIVSKFHLAFFEKAS---IITDKARIRRNYIKGRFLLD 123
Query: 79 LISSIPLDYIFLIFNQDFSENFQIL 103
L+S +P D I L D E Q+L
Sbjct: 124 LLSVLPFDLIALWLTVDKMEPSQVL 148
>SB_8690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 42.3 bits (95), Expect = 0.001
Identities = 17/80 (21%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 273 YGRFPPQSLTDMWLTMLSMISGATCY-ALFLGHATNLIQSLDSSRRQYREKVKQVEEYMA 331
YG + + W ++L+M+ G + + L LG +++ ++D R Y + + ++ YM
Sbjct: 2 YGDVYATNDKEKWFSVLAMLLGISMFFGLMLGGMASIVNNMDKMRAHYIQHLAAIKAYMD 61
Query: 332 YRKLPREMRQRITEYFEHRY 351
+ ++++R+ Y+E+ +
Sbjct: 62 DANITEDVQERVLTYYEYMW 81
>SB_50313| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 85
Score = 39.5 bits (88), Expect = 0.008
Identities = 22/75 (29%), Positives = 35/75 (46%)
Query: 361 ILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTI 420
+L + L+ DV + R++ S F V + K + + PG IIKEG
Sbjct: 1 VLRRFPDSLQSDVCVHIHRAVFGSHHVFHKLGEGCVRALSVKFNIKNYLPGHYIIKEGDE 60
Query: 421 GNKMYFIQEGIVDIV 435
+YF+ EG VD++
Sbjct: 61 VKYLYFVVEGTVDVI 75
>SB_27554| Best HMM Match : cNMP_binding (HMM E-Value=2.6)
Length = 82
Score = 37.9 bits (84), Expect = 0.024
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 448 GSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNAVLDQ-YPLMRRTMESVAAERLNK 506
G YFGE+ L+T+ R ASV + C SL V F +L +M+R ++ E+L K
Sbjct: 15 GGYFGELALITHNTRAASVYSVGDCVCASLDVHAFERLLGPCMDIMKRNIDGY-EEQLQK 73
Query: 507 IG 508
+G
Sbjct: 74 LG 75
>SB_11282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 36.7 bits (81), Expect = 0.055
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 18/99 (18%)
Query: 403 LRYEVFQPGDIIIKEGTIGNKMYFIQEGIV------------------DIVMANGEVATS 444
L Y+V++ +IIK+G IG YFI G V I+ ++ +
Sbjct: 179 LYYDVYEQDRVIIKQGHIGVSFYFIVSGSVVVQRVEEDRTTGEKHNQSMIIAYFSKIISE 238
Query: 445 LSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFN 483
++ G FGE+ L+ + RR A++ + + D FN
Sbjct: 239 MTGGDSFGELALMHDIRRTATIICKERSEFLRVDKDDFN 277
>SB_58276| Best HMM Match : MIB_HERC2 (HMM E-Value=8.3e-33)
Length = 2822
Score = 31.5 bits (68), Expect = 2.1
Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 309 IQSLDSSRRQYREKVKQVEE--YMAYRKLPREMRQRITEYFEHRYQGKFFDEEVILGELS 366
+ +++ +++ R +++E + A + +PRE+ R+ E EH + ++GE
Sbjct: 840 VSKVEAQKQKVRNLAMEIQETYFQAAQAMPREVVSRLQEIVEHLNDACLSQQNEMMGEGR 899
Query: 367 E-KLREDVIN 375
E K RE + N
Sbjct: 900 EGKWREQMYN 909
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 31.5 bits (68), Expect = 2.1
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 386 PFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGNKMYFIQEGIVDIVM---ANGEVA 442
P F + + + D++ + ++ +II+++G GN Y I +G V + +GE A
Sbjct: 783 PLFKLLEDDALLDIIKNVTLTRYRKDNIIMRQGEKGNCFYIILKGSVSVYAKQDGDGEAA 842
Query: 443 TSLSDGSYFGEICLLTNARRVASVRA 468
T + LL ++S+RA
Sbjct: 843 THHEQSVRSHKERLLLFGAELSSLRA 868
>SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 692
Score = 31.5 bits (68), Expect = 2.1
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 309 IQSLDSSRRQYREKVKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEEV 360
+++LD S +Q R+KVKQ+ E A + + +R+ FE R + K +E++
Sbjct: 71 VENLDMSLQQRRDKVKQMREKQAEERKRKNEERRLA--FEERKRQKEAEEKL 120
>SB_24596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 31.1 bits (67), Expect = 2.8
Identities = 35/170 (20%), Positives = 68/170 (40%), Gaps = 4/170 (2%)
Query: 356 FDEEVILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVTKLRYEVFQPGDIII 415
F+E + E +E+L D+ Y S + NA +T+L +
Sbjct: 1289 FEETIAEEEANERLFYDL--YGTLSSLGYPLIQGNAGDYGQEQTLTELTNMPLHGEGLGT 1346
Query: 416 KEGTIGNKMYFIQEGIVDIVMANGEVATSLSDGSYFGEICLLTNARRVASVRAETYCNLF 475
G IG F + +D+ + T SDG ++ +ICLL+ + + ++C+
Sbjct: 1347 SGGDIGVMSPF-EMAAMDVKNSVCSDYTDGSDGGWY-KICLLSLQQEQQPLNIRSWCSQI 1404
Query: 476 SLSVDHFNAVLDQYPLMRRTMESVAAERLNKIGKNPNLVAHREDDTTSEG 525
S H + ++ L R E+ + L+ + + + +DD +G
Sbjct: 1405 PTSSSHSGSQVEIAELARLMAETKSQVDLSGTSQGQDSLTKSDDDDGGDG 1454
>SB_44231| Best HMM Match : Ion_trans_2 (HMM E-Value=6.5e-09)
Length = 441
Score = 30.7 bits (66), Expect = 3.6
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 268 MLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGH-ATNLIQ-SLDSSRRQYREKVKQ 325
M +GYG P S+ L+++ M+SG + +G ATNL S++ + Y +V
Sbjct: 48 MTTVGYGDRCPASVPARILSIIWMLSGVVLMGILVGSIATNLSSISMNQASTIYGLRVAA 107
Query: 326 VEEYMAYR 333
++ YR
Sbjct: 108 IKNSFEYR 115
>SB_15453| Best HMM Match : Prenyltrans (HMM E-Value=0)
Length = 2376
Score = 30.7 bits (66), Expect = 3.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 403 LRYEVFQPGDIIIKEGTIGNKMYFIQEGIVDIVMANGE 440
LRY+ F ++I++G + + YFI G V + + E
Sbjct: 562 LRYDSFARSRVVIRKGHVAQRFYFIYSGSVCVTFDDDE 599
>SB_39603| Best HMM Match : HATPase_c (HMM E-Value=0.0009)
Length = 888
Score = 30.3 bits (65), Expect = 4.8
Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Query: 256 QYSWALFKAMSHMLCIGYGRFPPQSLTDMWLTMLSMISGATCYALFLGHATNLIQSLDSS 315
Q+S + H C YG +P Q++ + T Y L+ A +Q+L S+
Sbjct: 360 QHSAHRTDSTQHRQCAPYGLYPAQTVRTVQTTQHRQ---CPPYRLYQAQAVRTVQTLPST 416
Query: 316 RRQYREKVKQVEEYMAYRKLPRE 338
+R Q + + YR P +
Sbjct: 417 DSAHRTDSTQHRQCVPYRLYPAQ 439
>SB_20630| Best HMM Match : rve (HMM E-Value=2.3e-19)
Length = 698
Score = 30.3 bits (65), Expect = 4.8
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 337 REMRQRITEYFEHRYQGKFFDEEVILGELSEKLREDVINYNCRSLVASVPFFANADSNFV 396
R++R ++ FE+ K D+E +L E NYN R A +P D F+
Sbjct: 465 RKLRNKLPSVFENLRPRKI-DQEQLLKREQEYRERYSSNYNSRHRAAELPTLHQGDKVFI 523
Query: 397 SD 398
D
Sbjct: 524 RD 525
>SB_33437| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 200
Score = 29.5 bits (63), Expect = 8.4
Identities = 16/82 (19%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Query: 343 ITEYFEHRY-QGKFFDEEVILGELSEKLREDVINYNCRSLVASVPFFANADSNFVSDVVT 401
++ ++E+ + + + D + L D+ + + VP F N D FV +
Sbjct: 119 VSHHYEYTWLRNRGVDSSTLFEGTPLSLHADITISLYKDAIEKVPLFQNKDIGFVKMLSL 178
Query: 402 KLRYEVFQPGDIIIKEGTIGNK 423
++ F + I+++G IG++
Sbjct: 179 HVKPIYFLSNEYIVQKGEIGHE 200
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.323 0.136 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,995,892
Number of Sequences: 59808
Number of extensions: 679877
Number of successful extensions: 1587
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1474
Number of HSP's gapped (non-prelim): 81
length of query: 620
length of database: 16,821,457
effective HSP length: 86
effective length of query: 534
effective length of database: 11,677,969
effective search space: 6236035446
effective search space used: 6236035446
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 63 (29.5 bits)
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