GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001882-TA|BGIBMGA001882-PA|IPR013621|Ion transport
N-terminal, IPR005821|Ion transport, IPR000595|Cyclic
nucleotide-binding, IPR003938|EAG/ELK/ERG potassium channel,
IPR002373|cAMP-dependent protein kinase
         (620 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.         25   7.9  
AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.         25   7.9  
AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.         25   7.9  
AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.         25   7.9  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   7.9  

>AY341195-1|AAR13759.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 24.6 bits (51), Expect = 7.9
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 302 LGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEEVI 361
           LG+ TN I  +    RQY ++ K   E  A  K  +E  ++ +E  + +    F  +  I
Sbjct: 41  LGNQTNQISGISREARQYADRFK--AEADANMKQAQEAHKKASEALK-KANDAFNQQANI 97

Query: 362 LGELSEKLREDV 373
             EL   +  ++
Sbjct: 98  TKELDTSISSEI 109


>AY341194-1|AAR13758.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 24.6 bits (51), Expect = 7.9
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 302 LGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEEVI 361
           LG+ TN I  +    RQY ++ K   E  A  K  +E  ++ +E  + +    F  +  I
Sbjct: 41  LGNQTNQISGISREARQYADRFK--AEADANMKQAQEAHKKASEALK-KANDAFNQQANI 97

Query: 362 LGELSEKLREDV 373
             EL   +  ++
Sbjct: 98  TKELDTSISSEI 109


>AY341193-1|AAR13757.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 24.6 bits (51), Expect = 7.9
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 302 LGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEEVI 361
           LG+ TN I  +    RQY ++ K   E  A  K  +E  ++ +E  + +    F  +  I
Sbjct: 41  LGNQTNQISGISREARQYADRFK--AEADANMKQAQEAHKKASEALK-KANDAFNQQANI 97

Query: 362 LGELSEKLREDV 373
             EL   +  ++
Sbjct: 98  TKELDTSISSEI 109


>AY341192-1|AAR13756.1|  294|Anopheles gambiae laminin protein.
          Length = 294

 Score = 24.6 bits (51), Expect = 7.9
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 302 LGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEEVI 361
           LG+ TN I  +    RQY ++ K   E  A  K  +E  ++ +E  + +    F  +  I
Sbjct: 41  LGNQTNQISGISREARQYADRFK--AEADANMKQAQEAHKKASEALK-KANDAFNQQANI 97

Query: 362 LGELSEKLREDV 373
             EL   +  ++
Sbjct: 98  TKELDTSISSEI 109


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 24.6 bits (51), Expect = 7.9
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 302  LGHATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPREMRQRITEYFEHRYQGKFFDEEVI 361
            LG+ TN I  +    RQY ++ K   E  A  K  +E  ++ +E  + +    F  +  I
Sbjct: 1180 LGNQTNQISGISREARQYADRFK--AEADANMKQAQEAHKKASEALK-KANDAFNQQANI 1236

Query: 362  LGELSEKLREDV 373
              EL   +  ++
Sbjct: 1237 TKELDTSISSEI 1248


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.323    0.136    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,537
Number of Sequences: 2123
Number of extensions: 20507
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 37
Number of HSP's gapped (non-prelim): 5
length of query: 620
length of database: 516,269
effective HSP length: 68
effective length of query: 552
effective length of database: 371,905
effective search space: 205291560
effective search space used: 205291560
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 51 (24.6 bits)