Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001881-TA|BGIBMGA001881-PA|IPR013621|Ion transport
N-terminal
(90 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF488549-1|AAO49469.1| 890|Homo sapiens hyperpolarization activ... 63 1e-10
AJ238850-1|CAB52754.1| 1203|Homo sapiens hyperpolarization-activ... 62 2e-10
AJ132429-1|CAB42604.1| 1203|Homo sapiens hyperpolarization-activ... 62 2e-10
AJ133727-1|CAB42630.1| 889|Homo sapiens hyperpolarization-activ... 62 3e-10
AJ012582-1|CAB42602.1| 889|Homo sapiens hyperpolarization-activ... 62 3e-10
AF065164-1|AAC28444.2| 889|Homo sapiens hyperpolarization-activ... 62 3e-10
AF064877-1|AAC39760.1| 597|Homo sapiens ion channel BCNG-2 prot... 62 3e-10
AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization activ... 62 3e-10
BC111364-1|AAI11365.1| 142|Homo sapiens Unknown (protein for MG... 59 2e-09
AL713999-31|CAI95100.1| 774|Homo sapiens hyperpolarization acti... 59 2e-09
AF488550-1|AAO49470.1| 774|Homo sapiens hyperpolarization activ... 59 2e-09
AB040968-1|BAA96059.2| 711|Homo sapiens KIAA1535 protein protein. 39 0.002
BC039580-1|AAH39580.1| 819|Homo sapiens PARP9 protein protein. 34 0.060
AF307339-1|AAK07559.1| 819|Homo sapiens B aggressive lymphoma s... 34 0.060
AF307338-1|AAK07558.1| 854|Homo sapiens B aggressive lymphoma l... 34 0.060
AB209742-1|BAD92979.1| 359|Homo sapiens B aggressive lymphoma g... 34 0.060
AF064876-1|AAC39759.1| 749|Homo sapiens ion channel BCNG-1 prot... 33 0.18
AF110377-1|AAD04629.1| 3859|Homo sapiens PCAF-associated factor ... 29 3.0
AF076974-1|AAD09420.1| 3830|Homo sapiens TRRAP protein protein. 29 3.0
AC004991-1|AAC27675.2| 2089|Homo sapiens unknown protein. 29 3.0
AB209489-1|BAD92726.1| 3587|Homo sapiens Transformation/transcri... 29 3.0
BC029131-1|AAH29131.1| 129|Homo sapiens proline rich 15 protein. 28 5.2
X05562-1|CAA29076.1| 1043|Homo sapiens protein ( Human mRNA for ... 27 6.9
DQ225272-1|ABB04031.1| 165|Homo sapiens ring finger and KH doma... 27 6.9
AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha... 27 6.9
AL445543-1|CAI14772.1| 1860|Homo sapiens collagen, type XXVII, a... 27 6.9
AL356796-1|CAI16857.1| 1860|Homo sapiens collagen, type XXVII, a... 27 6.9
AL161773-3|CAH71366.2| 1712|Homo sapiens collagen type IV alpha ... 27 6.9
AL159153-1|CAH72050.2| 1712|Homo sapiens collagen type IV alpha ... 27 6.9
AL139385-2|CAI17005.2| 1712|Homo sapiens collagen type IV alpha ... 27 6.9
>AF488549-1|AAO49469.1| 890|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel
protein.
Length = 890
Score = 63.3 bits (147), Expect = 1e-10
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 34 PDAKQGFLRNQLQALFQPTDNKLAMKLFGSKKALMKERIRQKAAGHWVIHPCSSFR 89
P + GF++ Q ++ QP NK ++++FGS+KA+ KE+ R K AG W+IHP S FR
Sbjct: 87 PRRQYGFMQRQFTSMLQPGVNKFSLRMFGSQKAVEKEQERVKTAGFWIIHPYSDFR 142
>AJ238850-1|CAB52754.1| 1203|Homo sapiens
hyperpolarization-activated channel type 4 protein.
Length = 1203
Score = 62.5 bits (145), Expect = 2e-10
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 24 GTPVEPAPPAPDAKQGFLRNQLQALFQPTDNKLAMKLFGSKKALMKERIRQKAAGHWVIH 83
G + P + GF++ Q A+ QP NK ++++FGS+KA+ +E+ R K+AG W+IH
Sbjct: 197 GDQILPEAEVRLGQAGFMQRQFGAMLQPGVNKFSLRMFGSQKAVEREQERVKSAGFWIIH 256
Query: 84 PCSSFR 89
P S FR
Sbjct: 257 PYSDFR 262
>AJ132429-1|CAB42604.1| 1203|Homo sapiens
hyperpolarization-activated cyclic nucleotide gated
cation channel hHCN4 protein.
Length = 1203
Score = 62.5 bits (145), Expect = 2e-10
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 24 GTPVEPAPPAPDAKQGFLRNQLQALFQPTDNKLAMKLFGSKKALMKERIRQKAAGHWVIH 83
G + P + GF++ Q A+ QP NK ++++FGS+KA+ +E+ R K+AG W+IH
Sbjct: 197 GDQILPEAEVRLGQAGFMQRQFGAMLQPGVNKFSLRMFGSQKAVEREQERVKSAGFWIIH 256
Query: 84 PCSSFR 89
P S FR
Sbjct: 257 PYSDFR 262
>AJ133727-1|CAB42630.1| 889|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
channel hHCN2 protein.
Length = 889
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 29 PAPPAPDAKQGFLRNQLQALFQPTDNKLAMKLFGSKKALMKERIRQKAAGHWVIHPCSSF 88
PA ++ F++ Q AL QP NK ++++FGS+KA+ +E+ R K+AG W+IHP S F
Sbjct: 151 PAGEPRGSQASFMQRQFGALLQPGVNKFSLRMFGSQKAVEREQERVKSAGAWIIHPYSDF 210
Query: 89 R 89
R
Sbjct: 211 R 211
>AJ012582-1|CAB42602.1| 889|Homo sapiens
hyperpolarization-activated cation channel HCN2 protein.
Length = 889
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 29 PAPPAPDAKQGFLRNQLQALFQPTDNKLAMKLFGSKKALMKERIRQKAAGHWVIHPCSSF 88
PA ++ F++ Q AL QP NK ++++FGS+KA+ +E+ R K+AG W+IHP S F
Sbjct: 151 PAGEPRGSQASFMQRQFGALLQPGVNKFSLRMFGSQKAVEREQERVKSAGAWIIHPYSDF 210
Query: 89 R 89
R
Sbjct: 211 R 211
>AF065164-1|AAC28444.2| 889|Homo sapiens
hyperpolarization-activated, cyclic nucleotide-gated
channel 2 protein.
Length = 889
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 29 PAPPAPDAKQGFLRNQLQALFQPTDNKLAMKLFGSKKALMKERIRQKAAGHWVIHPCSSF 88
PA ++ F++ Q AL QP NK ++++FGS+KA+ +E+ R K+AG W+IHP S F
Sbjct: 151 PAGEPRGSQASFMQRQFGALLQPGVNKFSLRMFGSQKAVEREQERVKSAGAWIIHPYSDF 210
Query: 89 R 89
R
Sbjct: 211 R 211
>AF064877-1|AAC39760.1| 597|Homo sapiens ion channel BCNG-2
protein.
Length = 597
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 29 PAPPAPDAKQGFLRNQLQALFQPTDNKLAMKLFGSKKALMKERIRQKAAGHWVIHPCSSF 88
PA ++ F++ Q AL QP NK ++++FGS+KA+ +E+ R K+AG W+IHP S F
Sbjct: 5 PAGEPRGSQASFMQRQFGALLQPGVNKFSLRMFGSQKAVEREQERVKSAGAWIIHPYSDF 64
Query: 89 R 89
R
Sbjct: 65 R 65
>AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel 2
protein.
Length = 528
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 29 PAPPAPDAKQGFLRNQLQALFQPTDNKLAMKLFGSKKALMKERIRQKAAGHWVIHPCSSF 88
PA ++ F++ Q AL QP NK ++++FGS+KA+ +E+ R K+AG W+IHP S F
Sbjct: 151 PAGEPRGSQASFMQRQFGALLQPGVNKFSLRMFGSQKAVEREQERVKSAGAWIIHPYSDF 210
Query: 89 R 89
R
Sbjct: 211 R 211
>BC111364-1|AAI11365.1| 142|Homo sapiens Unknown (protein for
MGC:131493) protein.
Length = 142
Score = 58.8 bits (136), Expect = 2e-09
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 16 GLDDVSLYGTPVEPAPPAPDAKQGF--LRNQLQALFQPTDNKLAMKLFGSKKALMKERIR 73
GL+ V P A P K G R L L QPT NK ++++FGS KA+ E+ R
Sbjct: 18 GLEAVPPVAPPPATAASGPIPKSGPEPKRRHLGTLLQPTVNKFSLRVFGSHKAVEIEQER 77
Query: 74 QKAAGHWVIHPCSSFR 89
K+AG W+IHP S FR
Sbjct: 78 VKSAGAWIIHPYSDFR 93
>AL713999-31|CAI95100.1| 774|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel 3
protein.
Length = 774
Score = 58.8 bits (136), Expect = 2e-09
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 16 GLDDVSLYGTPVEPAPPAPDAKQGF--LRNQLQALFQPTDNKLAMKLFGSKKALMKERIR 73
GL+ V P A P K G R L L QPT NK ++++FGS KA+ E+ R
Sbjct: 18 GLEAVPPVAPPPATAASGPIPKSGPEPKRRHLGTLLQPTVNKFSLRVFGSHKAVEIEQER 77
Query: 74 QKAAGHWVIHPCSSFR 89
K+AG W+IHP S FR
Sbjct: 78 VKSAGAWIIHPYSDFR 93
>AF488550-1|AAO49470.1| 774|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel
protein.
Length = 774
Score = 58.8 bits (136), Expect = 2e-09
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 16 GLDDVSLYGTPVEPAPPAPDAKQGF--LRNQLQALFQPTDNKLAMKLFGSKKALMKERIR 73
GL+ V P A P K G R L L QPT NK ++++FGS KA+ E+ R
Sbjct: 18 GLEAVPPVAPPPATAASGPIPKSGPEPKRRHLGTLLQPTVNKFSLRVFGSHKAVEIEQER 77
Query: 74 QKAAGHWVIHPCSSFR 89
K+AG W+IHP S FR
Sbjct: 78 VKSAGAWIIHPYSDFR 93
>AB040968-1|BAA96059.2| 711|Homo sapiens KIAA1535 protein
protein.
Length = 711
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 60 LFGSKKALMKERIRQKAAGHWVIHPCSSFR 89
+FGS KA+ E+ R K+AG W+IHP S FR
Sbjct: 1 VFGSHKAVEIEQERVKSAGAWIIHPYSDFR 30
>BC039580-1|AAH39580.1| 819|Homo sapiens PARP9 protein protein.
Length = 819
Score = 34.3 bits (75), Expect = 0.060
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 26 PVEPAPPAPDAKQGFLRNQLQAL-FQPTDNKLAMKLFGSKKALMKERIRQKAAGH 79
PV P D K+ F + LQ L + DN++ M F KK +M+E++ ++ H
Sbjct: 612 PVPPTQELLDQKKQFEKCGLQVLKVEKIDNEVLMAAFQRKKKMMEEKLHRQPVSH 666
>AF307339-1|AAK07559.1| 819|Homo sapiens B aggressive lymphoma
short isoform protein.
Length = 819
Score = 34.3 bits (75), Expect = 0.060
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 26 PVEPAPPAPDAKQGFLRNQLQAL-FQPTDNKLAMKLFGSKKALMKERIRQKAAGH 79
PV P D K+ F + LQ L + DN++ M F KK +M+E++ ++ H
Sbjct: 612 PVPPTQELLDQKKQFEKCGLQVLKVEKIDNEVLMAAFQRKKKMMEEKLHRQPVSH 666
>AF307338-1|AAK07558.1| 854|Homo sapiens B aggressive lymphoma long
isoform protein.
Length = 854
Score = 34.3 bits (75), Expect = 0.060
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 26 PVEPAPPAPDAKQGFLRNQLQAL-FQPTDNKLAMKLFGSKKALMKERIRQKAAGH 79
PV P D K+ F + LQ L + DN++ M F KK +M+E++ ++ H
Sbjct: 647 PVPPTQELLDQKKQFEKCGLQVLKVEKIDNEVLMAAFQRKKKMMEEKLHRQPVSH 701
>AB209742-1|BAD92979.1| 359|Homo sapiens B aggressive lymphoma gene
variant protein.
Length = 359
Score = 34.3 bits (75), Expect = 0.060
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 26 PVEPAPPAPDAKQGFLRNQLQAL-FQPTDNKLAMKLFGSKKALMKERIRQKAAGH 79
PV P D K+ F + LQ L + DN++ M F KK +M+E++ ++ H
Sbjct: 261 PVPPTQELLDQKKQFEKCGLQVLKVEKIDNEVLMAAFQRKKKMMEEKLHRQPVSH 315
>AF064876-1|AAC39759.1| 749|Homo sapiens ion channel BCNG-1
protein.
Length = 749
Score = 32.7 bits (71), Expect = 0.18
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 69 KERIRQKAAGHWVIHPCSSFR 89
KE+ R K AG W+IHP S FR
Sbjct: 1 KEQERVKTAGFWIIHPYSDFR 21
>AF110377-1|AAD04629.1| 3859|Homo sapiens PCAF-associated factor 400
protein.
Length = 3859
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 25 TPVEPAPPAPDAKQGFLRNQLQALFQPTDNKLAMK 59
TPV PAP P KQG + + FQ TD + +K
Sbjct: 517 TPVTPAPVPPFEKQGEKDKEDKQTFQVTDCRSLVK 551
>AF076974-1|AAD09420.1| 3830|Homo sapiens TRRAP protein protein.
Length = 3830
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 25 TPVEPAPPAPDAKQGFLRNQLQALFQPTDNKLAMK 59
TPV PAP P KQG + + FQ TD + +K
Sbjct: 517 TPVTPAPVPPFEKQGEKDKEDKQTFQVTDCRSLVK 551
>AC004991-1|AAC27675.2| 2089|Homo sapiens unknown protein.
Length = 2089
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 25 TPVEPAPPAPDAKQGFLRNQLQALFQPTDNKLAMK 59
TPV PAP P KQG + + FQ TD + +K
Sbjct: 517 TPVTPAPVPPFEKQGEKDKEDKQTFQVTDCRSLVK 551
>AB209489-1|BAD92726.1| 3587|Homo sapiens
Transformation/transcription domain-associated protein
variant protein.
Length = 3587
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 25 TPVEPAPPAPDAKQGFLRNQLQALFQPTDNKLAMK 59
TPV PAP P KQG + + FQ TD + +K
Sbjct: 231 TPVTPAPVPPFEKQGEKDKEDKQTFQVTDCRSLVK 265
>BC029131-1|AAH29131.1| 129|Homo sapiens proline rich 15 protein.
Length = 129
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Query: 24 GTPVEPAPPAPDAKQGFLRNQLQALFQPT-DNKLAMKLFGSKKALMKERIRQKAAGHW 80
G P PAPP+PD NQ L + KL+G K + ++ +G +
Sbjct: 40 GEPTPPAPPSPDWTSSSRENQHPNLLGGAGEPPKPDKLYGDKSGSSRRNLKISRSGRF 97
>X05562-1|CAA29076.1| 1043|Homo sapiens protein ( Human mRNA for
alpha-2 chain of collagen IV N-terminus. ).
Length = 1043
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 13 HFGGLDDVSLYGTPVEPAPPAPDAKQG 39
H G + V G P P PP P +QG
Sbjct: 203 HVGQMGPVGAPGRPGPPGPPGPKGQQG 229
>DQ225272-1|ABB04031.1| 165|Homo sapiens ring finger and KH
domain containing 1 protein variant 1 protein.
Length = 165
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 24 GTPVEPAPPAPDAKQGFLRNQLQALFQPTDNKLAMKLFGSKK 65
GTP P P PD GF + AL PT M + GS+K
Sbjct: 24 GTPPPPRPSPPDVFAGFAPHP-AALGPPTLLADQMSVIGSRK 64
>AY149237-1|AAN41263.1| 1860|Homo sapiens collagen XXVII proalpha 1
chain precursor protein.
Length = 1860
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 6 GSGTGKVHFGGLDDVSLYGTPVEPAPPAPDAKQGF 40
G GK H G D+ L G P PP +G+
Sbjct: 679 GLSPGKAHDGAKGDMGLPGLSGNPGPPGRKGHKGY 713
>AL445543-1|CAI14772.1| 1860|Homo sapiens collagen, type XXVII,
alpha 1 protein.
Length = 1860
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 6 GSGTGKVHFGGLDDVSLYGTPVEPAPPAPDAKQGF 40
G GK H G D+ L G P PP +G+
Sbjct: 679 GLSPGKAHDGAKGDMGLPGLSGNPGPPGRKGHKGY 713
>AL356796-1|CAI16857.1| 1860|Homo sapiens collagen, type XXVII,
alpha 1 protein.
Length = 1860
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 6 GSGTGKVHFGGLDDVSLYGTPVEPAPPAPDAKQGF 40
G GK H G D+ L G P PP +G+
Sbjct: 679 GLSPGKAHDGAKGDMGLPGLSGNPGPPGRKGHKGY 713
>AL161773-3|CAH71366.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 13 HFGGLDDVSLYGTPVEPAPPAPDAKQG 39
H G + V G P P PP P +QG
Sbjct: 203 HVGQMGPVGAPGRPGPPGPPGPKGQQG 229
>AL159153-1|CAH72050.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 13 HFGGLDDVSLYGTPVEPAPPAPDAKQG 39
H G + V G P P PP P +QG
Sbjct: 203 HVGQMGPVGAPGRPGPPGPPGPKGQQG 229
>AL139385-2|CAI17005.2| 1712|Homo sapiens collagen type IV alpha 2
protein.
Length = 1712
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 13 HFGGLDDVSLYGTPVEPAPPAPDAKQG 39
H G + V G P P PP P +QG
Sbjct: 203 HVGQMGPVGAPGRPGPPGPPGPKGQQG 229
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.319 0.135 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,352,523
Number of Sequences: 224733
Number of extensions: 504427
Number of successful extensions: 2255
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2210
Number of HSP's gapped (non-prelim): 51
length of query: 90
length of database: 73,234,838
effective HSP length: 68
effective length of query: 22
effective length of database: 57,952,994
effective search space: 1274965868
effective search space used: 1274965868
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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