GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001880-TA|BGIBMGA001880-PA|undefined
         (106 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    20   6.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    19   8.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    19   8.1  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.8 bits (39), Expect = 6.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)

Query: 75  TIEELTDAYEVDQCGTEHLSAF 96
           T+EE  + YE     ++HL  F
Sbjct: 299 TMEEKQELYEFSNFVSQHLPKF 320


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 19.4 bits (38), Expect = 8.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)

Query: 25   KANFTYSRDK 34
            K NFTY  DK
Sbjct: 1259 KVNFTYFEDK 1268


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 19.4 bits (38), Expect = 8.1
 Identities = 7/10 (70%), Positives = 7/10 (70%)

Query: 25   KANFTYSRDK 34
            K NFTY  DK
Sbjct: 1259 KVNFTYFEDK 1268


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.317    0.133    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,050
Number of Sequences: 317
Number of extensions: 388
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 106
length of database: 114,650
effective HSP length: 49
effective length of query: 57
effective length of database: 99,117
effective search space:  5649669
effective search space used:  5649669
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
S2: 38 (19.4 bits)