GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001880-TA|BGIBMGA001880-PA|undefined
         (106 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY534997-1|AAT07395.1|  352|Drosophila melanogaster XK-related p...    29   0.90 
AE014298-2366|AAN09393.1|  352|Drosophila melanogaster CG32579-P...    29   0.90 
AY058348-1|AAL13577.1|  728|Drosophila melanogaster GH12158p pro...    26   8.4  
AE014297-1704|AAF54962.2|  728|Drosophila melanogaster CG10841-P...    26   8.4  

>AY534997-1|AAT07395.1|  352|Drosophila melanogaster XK-related
           protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 0.90
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 16  DRYLSNYGIKANFTYSRDKLDADMKRYSKLMLE 48
           D Y+ NY  K +    RD   A+++ Y KLM E
Sbjct: 105 DVYVLNYAFKYSLAKERDDKQAEIEYYQKLMTE 137


>AE014298-2366|AAN09393.1|  352|Drosophila melanogaster CG32579-PA
           protein.
          Length = 352

 Score = 29.5 bits (63), Expect = 0.90
 Identities = 13/33 (39%), Positives = 18/33 (54%)

Query: 16  DRYLSNYGIKANFTYSRDKLDADMKRYSKLMLE 48
           D Y+ NY  K +    RD   A+++ Y KLM E
Sbjct: 105 DVYVLNYAFKYSLAKERDDKQAEIEYYQKLMTE 137


>AY058348-1|AAL13577.1|  728|Drosophila melanogaster GH12158p
           protein.
          Length = 728

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 13  PELDRYLSNYGIKANFTYSRDKLDADMKRYS 43
           PE D  LS YG +  F Y++   D D   Y+
Sbjct: 452 PEQDSVLSRYGNELGFCYTKFLDDVDPAEYA 482


>AE014297-1704|AAF54962.2|  728|Drosophila melanogaster CG10841-PA
           protein.
          Length = 728

 Score = 26.2 bits (55), Expect = 8.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 13  PELDRYLSNYGIKANFTYSRDKLDADMKRYS 43
           PE D  LS YG +  F Y++   D D   Y+
Sbjct: 452 PEQDSVLSRYGNELGFCYTKFLDDVDPAEYA 482


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.133    0.367 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,737,664
Number of Sequences: 52641
Number of extensions: 92639
Number of successful extensions: 278
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 274
Number of HSP's gapped (non-prelim): 4
length of query: 106
length of database: 24,830,863
effective HSP length: 74
effective length of query: 32
effective length of database: 20,935,429
effective search space: 669933728
effective search space used: 669933728
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)