GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001878-TA|BGIBMGA001878-PA|undefined
         (503 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    27   0.40 
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    27   0.40 
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    26   0.70 
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    24   2.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   2.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   2.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   2.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   2.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   2.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   2.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   2.1  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    24   2.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   2.8  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    23   3.8  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    23   3.8  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   8.7  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 26.6 bits (56), Expect = 0.40
 Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 281 EQRSTFYKKYKMKIVVGEDGTVHEY-GCAKDTPRCFPTVKGKPSYVYSDKHTPPC--CLR 337
           EQ +T Y    +  ++  +  +  Y  C  D   C P    +   V  D     C  C  
Sbjct: 17  EQYTTKYDNINVDEILASERLLKNYFNCIMDRGACTPDAD-ELKRVLPDALKSDCAKCSE 75

Query: 338 NMREVTKHVLDVLEQAGVRCWLETSS 363
             +E+TK V+  L     + W E ++
Sbjct: 76  KQKEMTKKVIHFLSHNKQQMWKELTA 101


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 26.6 bits (56), Expect = 0.40
 Identities = 18/64 (28%), Positives = 27/64 (42%)

Query: 265 VLKTLPEKQIVAEKVKEQRSTFYKKYKMKIVVGEDGTVHEYGCAKDTPRCFPTVKGKPSY 324
           +L TL   Q +  KV+E+  +   K K+          +   C K+T R FP+V     Y
Sbjct: 8   ILLTLANLQDIQTKVREEILSVVGKEKIPTYNDLQELKYTKRCIKETLRLFPSVPFISRY 67

Query: 325 VYSD 328
              D
Sbjct: 68  ASED 71


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 25.8 bits (54), Expect = 0.70
 Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 88  AFPDMQVL-VVCERSPYPPIELPPTNSSYRNVKILSLDYEIDSCPYT 133
           AF    VL V    +P P  ++P  N     + I+S DY     P T
Sbjct: 166 AFGSKYVLSVTVSANPLPSYDIPEINKVVDFINIMSYDYHTADQPQT 212


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 298 EDGTVHEYGCAKDTPRCFPTVKGK 321
           +  T H  GC   +P CF   +GK
Sbjct: 214 QKATEHVIGCVLCSPGCFSLFRGK 237


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 298 EDGTVHEYGCAKDTPRCFPTVKGK 321
           +  T H  GC   +P CF   +GK
Sbjct: 528 QKATEHVIGCVLCSPGCFSLFRGK 551


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 298 EDGTVHEYGCAKDTPRCFPTVKGK 321
           +  T H  GC   +P CF   +GK
Sbjct: 788 QKATEHVIGCVLCSPGCFSLFRGK 811


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 298 EDGTVHEYGCAKDTPRCFPTVKGK 321
           +  T H  GC   +P CF   +GK
Sbjct: 788 QKATEHVIGCVLCSPGCFSLFRGK 811


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 298 EDGTVHEYGCAKDTPRCFPTVKGK 321
           +  T H  GC   +P CF   +GK
Sbjct: 761 QKATEHVIGCVLCSPGCFSLFRGK 784


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 298 EDGTVHEYGCAKDTPRCFPTVKGK 321
           +  T H  GC   +P CF   +GK
Sbjct: 761 QKATEHVIGCVLCSPGCFSLFRGK 784


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 298 EDGTVHEYGCAKDTPRCFPTVKGK 321
           +  T H  GC   +P CF   +GK
Sbjct: 788 QKATEHVIGCVLCSPGCFSLFRGK 811


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 298 EDGTVHEYGCAKDTPRCFPTVKGK 321
           +  T H  GC   +P CF   +GK
Sbjct: 788 QKATEHVIGCVLCSPGCFSLFRGK 811


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 129 SCPYTSSPLSPFNIETEYTLFVPDS 153
           S    S+PL  FNI T   L+ P S
Sbjct: 18  SSALNSTPLIEFNISTSNYLYTPSS 42


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 129 SCPYTSSPLSPFNIETEYTLFVPDS 153
           S    S+PL  FNI T   L+ P S
Sbjct: 18  SSALNSTPLIEFNISTSNYLYTPSS 42


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query: 401 DADGFVWERATKGHYYS 417
           D D F+ ER  + HYYS
Sbjct: 109 DPDNFLPERCQQRHYYS 125


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 3.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)

Query: 401 DADGFVWERATKGHYYS 417
           D D F+ ER    HYYS
Sbjct: 109 DPDNFLPERTANRHYYS 125


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)

Query: 253 QVLYHTFG-PGRKVLKTLPEKQIVAEKVKEQRSTFYKKYKMKIV 295
           Q L   FG  G  +    PE +   +K++ + S+F+ K K KIV
Sbjct: 132 QALVKNFGFDGLDLAWEFPETK--PKKIRGKISSFFSKLKHKIV 173


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.137    0.423 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,519
Number of Sequences: 317
Number of extensions: 5469
Number of successful extensions: 22
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 16
length of query: 503
length of database: 114,650
effective HSP length: 60
effective length of query: 443
effective length of database: 95,630
effective search space: 42364090
effective search space used: 42364090
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)