Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001878-TA|BGIBMGA001878-PA|undefined
(503 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002612-1|AAH02612.1| 495|Homo sapiens fukutin related protein... 265 3e-70
AK022638-1|BAB14146.1| 495|Homo sapiens protein ( Homo sapiens ... 265 3e-70
AJ314847-1|CAC85633.1| 495|Homo sapiens fukutin-related protein... 265 3e-70
BC117700-1|AAI17701.1| 329|Homo sapiens FCMD protein protein. 31 7.2
BC117699-1|AAI17700.1| 461|Homo sapiens Fukuyama type congenita... 31 7.2
BC112038-1|AAI12039.1| 461|Homo sapiens Fukuyama type congenita... 31 7.2
BC101808-1|AAI01809.1| 461|Homo sapiens Fukuyama type congenita... 31 7.2
AL158070-2|CAC22162.1| 461|Homo sapiens Fukuyama type congenita... 31 7.2
AB038490-1|BAA94082.1| 461|Homo sapiens fukutin protein. 31 7.2
AB008226-1|BAA32000.1| 461|Homo sapiens fukutin protein. 31 7.2
>BC002612-1|AAH02612.1| 495|Homo sapiens fukutin related protein
protein.
Length = 495
Score = 265 bits (649), Expect = 3e-70
Identities = 158/438 (36%), Positives = 235/438 (53%), Gaps = 17/438 (3%)
Query: 64 VTVVFRQFEEADNDVADSVLSFVSAFPDMQVLVVCERSPYPPIELPPTNSSYRNVKILSL 123
VTV+ R+FE DN V + V SF+ P V+V + PYPP+ LP NV++ L
Sbjct: 49 VTVLVREFEAFDNAVPELVDSFLQQDPAQPVVVAADTLPYPPLALP----RIPNVRLALL 104
Query: 124 DYEIDSCPYTSSPLSPFNIETEYTLFVPDSVRVKPRVLHQAVIEA-NANPLHVIAIGIGF 182
+D S P + + TE+ VPD R + L + ++EA A ++A +
Sbjct: 105 QPALDRPAAASRPET--YVATEFVALVPDGARAEAPGLLERMVEALRAGSARLVAAPVAT 162
Query: 183 -HEIKCQRICWNYRDWTLKYTKDSTGTICDAVTGPHALLIKTEYLSKVPDPIALPFPESL 241
+ +C + + R+WT +Y CDA+ G +L++ L + P+A P SL
Sbjct: 163 ANPARCLALNVSLREWTARYGAAPAAPRCDALDGDAVVLLRARDLFNLSAPLARPVGTSL 222
Query: 242 YLQTYVKMAKVQVLYHTFGPGRKV-LKTLPEKQIVAEKVKEQRSTFYKKYKMKIVVGEDG 300
+LQT ++ VQ+L TF R+ L T + + + +R+ + +++V E G
Sbjct: 223 FLQTALRGWAVQLLDLTFAAARQPPLATAHARWKAEREGRARRAALLRALGIRLVSWEGG 282
Query: 301 TVHEYGCAKDTPRCFPTVKGK-PSYVYSDKHTPPCCLRNMREVTKHVLDVLEQAGVRCWL 359
+ +GC K+T RCF TV G P+Y+Y ++ TPPCCLR +RE ++V+ VLE AGVR WL
Sbjct: 283 RLEWFGCNKETTRCFGTVVGDTPAYLYEERWTPPCCLRALRETARYVVGVLEAAGVRYWL 342
Query: 360 ETSSLLGAVVDGNVLVWADHVELGIYSSDIDRVPYLQ--RGGT--DADGFVWERATKGHY 415
E SLLGA G+++ W V+LGIY D+ L+ G+ D GFVWE+A +G +
Sbjct: 343 EGGSLLGAARHGDIIPWDYDVDLGIYLEDVGNCEQLRGAEAGSVVDERGFVWEKAVEGDF 402
Query: 416 YSVSLSAINKANVLILPFTSQNGTMWPADWVLAHQR--EFPERHLHPLAQIPFAYVQAPA 473
+ V S N +V + PF +NG M W L H++ EFPE L PL +PFA A A
Sbjct: 403 FRVQYSESNHLHVDLWPFYPRNGVMTKDTW-LDHRQDVEFPEHFLQPLVPLPFAGFVAQA 461
Query: 474 PNDAHAFLDLKLGPNAVE 491
PN+ FL+LK GP +E
Sbjct: 462 PNNYRRFLELKFGPGVIE 479
>AK022638-1|BAB14146.1| 495|Homo sapiens protein ( Homo sapiens
cDNA FLJ12576 fis, clone NT2RM4001032. ).
Length = 495
Score = 265 bits (649), Expect = 3e-70
Identities = 158/438 (36%), Positives = 235/438 (53%), Gaps = 17/438 (3%)
Query: 64 VTVVFRQFEEADNDVADSVLSFVSAFPDMQVLVVCERSPYPPIELPPTNSSYRNVKILSL 123
VTV+ R+FE DN V + V SF+ P V+V + PYPP+ LP NV++ L
Sbjct: 49 VTVLVREFEAFDNAVPELVDSFLQQDPAQPVVVAADTLPYPPLALP----RIPNVRLALL 104
Query: 124 DYEIDSCPYTSSPLSPFNIETEYTLFVPDSVRVKPRVLHQAVIEA-NANPLHVIAIGIGF 182
+D S P + + TE+ VPD R + L + ++EA A ++A +
Sbjct: 105 QPALDRPAAASRPET--YVATEFVALVPDGARAEAPGLLERMVEALRAGSARLVAAPVAT 162
Query: 183 -HEIKCQRICWNYRDWTLKYTKDSTGTICDAVTGPHALLIKTEYLSKVPDPIALPFPESL 241
+ +C + + R+WT +Y CDA+ G +L++ L + P+A P SL
Sbjct: 163 ANPARCLALNVSLREWTARYGAAPAAPRCDALDGDAVVLLRARDLFNLSAPLARPVGTSL 222
Query: 242 YLQTYVKMAKVQVLYHTFGPGRKV-LKTLPEKQIVAEKVKEQRSTFYKKYKMKIVVGEDG 300
+LQT ++ VQ+L TF R+ L T + + + +R+ + +++V E G
Sbjct: 223 FLQTALRGWAVQLLDLTFAAARQPPLATAHARWKAEREGRARRAALLRALGIRLVSWEGG 282
Query: 301 TVHEYGCAKDTPRCFPTVKGK-PSYVYSDKHTPPCCLRNMREVTKHVLDVLEQAGVRCWL 359
+ +GC K+T RCF TV G P+Y+Y ++ TPPCCLR +RE ++V+ VLE AGVR WL
Sbjct: 283 RLEWFGCNKETTRCFGTVVGDTPAYLYEERWTPPCCLRALRETARYVVGVLEAAGVRYWL 342
Query: 360 ETSSLLGAVVDGNVLVWADHVELGIYSSDIDRVPYLQ--RGGT--DADGFVWERATKGHY 415
E SLLGA G+++ W V+LGIY D+ L+ G+ D GFVWE+A +G +
Sbjct: 343 EGGSLLGAARHGDIIPWDYDVDLGIYLEDVGNCEQLRGAEAGSVVDERGFVWEKAVEGDF 402
Query: 416 YSVSLSAINKANVLILPFTSQNGTMWPADWVLAHQR--EFPERHLHPLAQIPFAYVQAPA 473
+ V S N +V + PF +NG M W L H++ EFPE L PL +PFA A A
Sbjct: 403 FRVQYSESNHLHVDLWPFYPRNGVMTKDTW-LDHRQDVEFPEHFLQPLVPLPFAGFVAQA 461
Query: 474 PNDAHAFLDLKLGPNAVE 491
PN+ FL+LK GP +E
Sbjct: 462 PNNYRRFLELKFGPGVIE 479
>AJ314847-1|CAC85633.1| 495|Homo sapiens fukutin-related protein
protein.
Length = 495
Score = 265 bits (649), Expect = 3e-70
Identities = 158/438 (36%), Positives = 235/438 (53%), Gaps = 17/438 (3%)
Query: 64 VTVVFRQFEEADNDVADSVLSFVSAFPDMQVLVVCERSPYPPIELPPTNSSYRNVKILSL 123
VTV+ R+FE DN V + V SF+ P V+V + PYPP+ LP NV++ L
Sbjct: 49 VTVLVREFEAFDNAVPELVDSFLQQDPAQPVVVAADTLPYPPLALP----RIPNVRLALL 104
Query: 124 DYEIDSCPYTSSPLSPFNIETEYTLFVPDSVRVKPRVLHQAVIEA-NANPLHVIAIGIGF 182
+D S P + + TE+ VPD R + L + ++EA A ++A +
Sbjct: 105 QPALDRPAAASRPET--YVATEFVALVPDGARAEAPGLLERMVEALRAGSARLVAAPVAT 162
Query: 183 -HEIKCQRICWNYRDWTLKYTKDSTGTICDAVTGPHALLIKTEYLSKVPDPIALPFPESL 241
+ +C + + R+WT +Y CDA+ G +L++ L + P+A P SL
Sbjct: 163 ANPARCLALNVSLREWTARYGAAPAAPRCDALDGDAVVLLRARDLFNLSAPLARPVGTSL 222
Query: 242 YLQTYVKMAKVQVLYHTFGPGRKV-LKTLPEKQIVAEKVKEQRSTFYKKYKMKIVVGEDG 300
+LQT ++ VQ+L TF R+ L T + + + +R+ + +++V E G
Sbjct: 223 FLQTALRGWAVQLLDLTFAAARQPPLATAHARWKAEREGRARRAALLRALGIRLVSWEGG 282
Query: 301 TVHEYGCAKDTPRCFPTVKGK-PSYVYSDKHTPPCCLRNMREVTKHVLDVLEQAGVRCWL 359
+ +GC K+T RCF TV G P+Y+Y ++ TPPCCLR +RE ++V+ VLE AGVR WL
Sbjct: 283 RLEWFGCNKETTRCFGTVVGDTPAYLYEERWTPPCCLRALRETARYVVGVLEAAGVRYWL 342
Query: 360 ETSSLLGAVVDGNVLVWADHVELGIYSSDIDRVPYLQ--RGGT--DADGFVWERATKGHY 415
E SLLGA G+++ W V+LGIY D+ L+ G+ D GFVWE+A +G +
Sbjct: 343 EGGSLLGAARHGDIIPWDYDVDLGIYLEDVGNCEQLRGAEAGSVVDERGFVWEKAVEGDF 402
Query: 416 YSVSLSAINKANVLILPFTSQNGTMWPADWVLAHQR--EFPERHLHPLAQIPFAYVQAPA 473
+ V S N +V + PF +NG M W L H++ EFPE L PL +PFA A A
Sbjct: 403 FRVQYSESNHLHVDLWPFYPRNGVMTKDTW-LDHRQDVEFPEHFLQPLVPLPFAGFVAQA 461
Query: 474 PNDAHAFLDLKLGPNAVE 491
PN+ FL+LK GP +E
Sbjct: 462 PNNYRRFLELKFGPGVIE 479
>BC117700-1|AAI17701.1| 329|Homo sapiens FCMD protein protein.
Length = 329
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 337 RNMREVTKHVLDVLEQAGVRCWLETSSLLGAVVDGNVLVWADHVELGIYSSD 388
++ +E+ + L + GV WL + + LG N++ ++ V+LGI+ D
Sbjct: 143 KSAKELLQLAAKTLNKLGVPFWLSSGTCLGWYRQCNIIPYSKDVDLGIFIQD 194
>BC117699-1|AAI17700.1| 461|Homo sapiens Fukuyama type congenital
muscular dystrophy (fukutin) protein.
Length = 461
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 337 RNMREVTKHVLDVLEQAGVRCWLETSSLLGAVVDGNVLVWADHVELGIYSSD 388
++ +E+ + L + GV WL + + LG N++ ++ V+LGI+ D
Sbjct: 275 KSAKELLQLAAKTLNKLGVPFWLSSGTCLGWYRQCNIIPYSKDVDLGIFIQD 326
>BC112038-1|AAI12039.1| 461|Homo sapiens Fukuyama type congenital
muscular dystrophy (fukutin) protein.
Length = 461
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 337 RNMREVTKHVLDVLEQAGVRCWLETSSLLGAVVDGNVLVWADHVELGIYSSD 388
++ +E+ + L + GV WL + + LG N++ ++ V+LGI+ D
Sbjct: 275 KSAKELLQLAAKTLNKLGVPFWLSSGTCLGWYRQCNIIPYSKDVDLGIFIQD 326
>BC101808-1|AAI01809.1| 461|Homo sapiens Fukuyama type congenital
muscular dystrophy (fukutin) protein.
Length = 461
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 337 RNMREVTKHVLDVLEQAGVRCWLETSSLLGAVVDGNVLVWADHVELGIYSSD 388
++ +E+ + L + GV WL + + LG N++ ++ V+LGI+ D
Sbjct: 275 KSAKELLQLAAKTLNKLGVPFWLSSGTCLGWYRQCNIIPYSKDVDLGIFIQD 326
>AL158070-2|CAC22162.1| 461|Homo sapiens Fukuyama type congenital
muscular dystrophy (fukutin) protein.
Length = 461
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 337 RNMREVTKHVLDVLEQAGVRCWLETSSLLGAVVDGNVLVWADHVELGIYSSD 388
++ +E+ + L + GV WL + + LG N++ ++ V+LGI+ D
Sbjct: 275 KSAKELLQLAAKTLNKLGVPFWLSSGTCLGWYRQCNIIPYSKDVDLGIFIQD 326
>AB038490-1|BAA94082.1| 461|Homo sapiens fukutin protein.
Length = 461
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 337 RNMREVTKHVLDVLEQAGVRCWLETSSLLGAVVDGNVLVWADHVELGIYSSD 388
++ +E+ + L + GV WL + + LG N++ ++ V+LGI+ D
Sbjct: 275 KSAKELLQLAAKTLNKLGVPFWLSSGTCLGWYRQCNIIPYSKDVDLGIFIQD 326
>AB008226-1|BAA32000.1| 461|Homo sapiens fukutin protein.
Length = 461
Score = 31.5 bits (68), Expect = 7.2
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 337 RNMREVTKHVLDVLEQAGVRCWLETSSLLGAVVDGNVLVWADHVELGIYSSD 388
++ +E+ + L + GV WL + + LG N++ ++ V+LGI+ D
Sbjct: 275 KSAKELLQLAAKTLNKLGVPFWLSSGTCLGWYRQCNIIPYSKDVDLGIFIQD 326
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.137 0.423
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,832,945
Number of Sequences: 224733
Number of extensions: 3410653
Number of successful extensions: 8559
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8531
Number of HSP's gapped (non-prelim): 10
length of query: 503
length of database: 73,234,838
effective HSP length: 93
effective length of query: 410
effective length of database: 52,334,669
effective search space: 21457214290
effective search space used: 21457214290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 67 (31.1 bits)
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